RNA–Protein interactions for RNA: ENST00000493805.6

ACSS2-222, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 4

Gene ACSS2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-222	ENST00000493805	TRAK1	Q9UPV9	953 aa		28.85	■■■□□ 2.21
ACSS2-222	ENST00000493805	PRAM1	Q96QH2	718 aa		28.82	■■■□□ 2.2
ACSS2-222	ENST00000493805	TRPM1	Q7Z4N2	1603 aa		28.81	■■■□□ 2.2
ACSS2-222	ENST00000493805	CCER1	Q8TC90	406 aa	Predicted RBP	28.8	■■■□□ 2.2
ACSS2-222	ENST00000493805	MST1R	Q04912	1400 aa		28.79	■■■□□ 2.2
ACSS2-222	ENST00000493805	ROBO1	Q9Y6N7	1651 aa		28.78	■■■□□ 2.2
ACSS2-222	ENST00000493805	HSPA1L	P34931	641 aa		28.78	■■■□□ 2.2
ACSS2-222	ENST00000493805	POGK	Q9P215	609 aa		28.76	■■■□□ 2.19
ACSS2-222	ENST00000493805	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.75	■■■□□ 2.19
ACSS2-222	ENST00000493805	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
ACSS2-222	ENST00000493805	CDC42BPG	Q6DT37	1551 aa		28.74	■■■□□ 2.19
ACSS2-222	ENST00000493805	TIMELESS	Q9UNS1	1208 aa		28.73	■■■□□ 2.19
ACSS2-222	ENST00000493805	BRINP3	Q76B58	766 aa		28.71	■■■□□ 2.19
ACSS2-222	ENST00000493805	C1orf167	Q5SNV9	1468 aa		28.71	■■■□□ 2.19
ACSS2-222	ENST00000493805	ILDR2	Q71H61	639 aa		28.7	■■■□□ 2.18
ACSS2-222	ENST00000493805	GPRASP1	Q5JY77	1395 aa		28.69	■■■□□ 2.18
ACSS2-222	ENST00000493805	MED1	Q15648	1581 aa	Predicted RBP	28.69	■■■□□ 2.18
ACSS2-222	ENST00000493805	ROCK2	O75116	1388 aa	Known RBP	28.68	■■■□□ 2.18
ACSS2-222	ENST00000493805	FMN2	Q9NZ56	1722 aa		28.66	■■■□□ 2.18
ACSS2-222	ENST00000493805	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.66	■■■□□ 2.18
ACSS2-222	ENST00000493805	RALGAPB	Q86X10	1494 aa		28.66	■■■□□ 2.18
ACSS2-222	ENST00000493805	ORAI2	Q96SN7	254 aa		28.65	■■■□□ 2.18
ACSS2-222	ENST00000493805	ADGRB2	O60241	1585 aa		28.65	■■■□□ 2.18
ACSS2-222	ENST00000493805	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.63	■■■□□ 2.17
ACSS2-222	ENST00000493805	NUTM2F	A1L443	756 aa		28.62	■■■□□ 2.17
ACSS2-222	ENST00000493805	SOCS7	O14512	581 aa		28.62	■■■□□ 2.17
ACSS2-222	ENST00000493805	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.6	■■■□□ 2.17
ACSS2-222	ENST00000493805	WASL	O00401	505 aa	Predicted RBP	28.59	■■■□□ 2.17
ACSS2-222	ENST00000493805	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.59	■■■□□ 2.17
ACSS2-222	ENST00000493805	PHLPP1	O60346	1717 aa		28.58	■■■□□ 2.17
ACSS2-222	ENST00000493805	RGPD8	O14715	1765 aa	Predicted RBP	28.58	■■■□□ 2.17
ACSS2-222	ENST00000493805	CARD11	Q9BXL7	1154 aa		28.58	■■■□□ 2.17
ACSS2-222	ENST00000493805	ESCO1	Q5FWF5	840 aa		28.57	■■■□□ 2.16
ACSS2-222	ENST00000493805	NHSL1	Q5SYE7	1610 aa		28.57	■■■□□ 2.16
ACSS2-222	ENST00000493805	USP32	Q8NFA0	1604 aa		28.56	■■■□□ 2.16
ACSS2-222	ENST00000493805	DDX17	Q92841	729 aa	Known RBP	28.56	■■■□□ 2.16
ACSS2-222	ENST00000493805	COL16A1	Q07092	1604 aa	Predicted RBP	28.55	■■■□□ 2.16
ACSS2-222	ENST00000493805	QRICH2	Q9H0J4	1663 aa		28.53	■■■□□ 2.16
ACSS2-222	ENST00000493805	ANKAR	Q7Z5J8	1434 aa		28.52	■■■□□ 2.16
ACSS2-222	ENST00000493805	PRR36	Q9H6K5	1346 aa		28.52	■■■□□ 2.16
ACSS2-222	ENST00000493805	CDK19	Q9BWU1	502 aa		28.52	■■■□□ 2.16
ACSS2-222	ENST00000493805	TULP4	Q9NRJ4	1543 aa		28.5	■■■□□ 2.15
ACSS2-222	ENST00000493805	SOS2	Q07890	1332 aa	Predicted RBP	28.48	■■■□□ 2.15
ACSS2-222	ENST00000493805	FOXO3	O43524	673 aa		28.48	■■■□□ 2.15
ACSS2-222	ENST00000493805	EIF3A	Q14152	1382 aa	Known RBP	28.48	■■■□□ 2.15
ACSS2-222	ENST00000493805	PHF8	Q9UPP1	1060 aa		28.47	■■■□□ 2.15
ACSS2-222	ENST00000493805	NUDT16	Q96DE0	195 aa	Known RBP	28.45	■■■□□ 2.14
ACSS2-222	ENST00000493805	KIF1A	Q12756	1690 aa		28.45	■■■□□ 2.14
ACSS2-222	ENST00000493805	NPHP3	Q7Z494	1330 aa		28.43	■■■□□ 2.14
ACSS2-222	ENST00000493805	ATP7B	P35670	1465 aa		28.43	■■■□□ 2.14
ACSS2-222	ENST00000493805	JCAD	Q9P266	1359 aa		28.43	■■■□□ 2.14
ACSS2-222	ENST00000493805	LRRC59	Q96AG4	307 aa	Known RBP	28.43	■■■□□ 2.14
ACSS2-222	ENST00000493805	PXDN	Q92626	1479 aa		28.42	■■■□□ 2.14
ACSS2-222	ENST00000493805	SBNO2	Q9Y2G9	1366 aa		28.42	■■■□□ 2.14
ACSS2-222	ENST00000493805	PMFBP1	Q8TBY8	1022 aa		28.41	■■■□□ 2.14
ACSS2-222	ENST00000493805	CABP2	Q9NPB3	220 aa		28.4	■■■□□ 2.14
ACSS2-222	ENST00000493805	XPC	Q01831	940 aa	Predicted RBP	28.39	■■■□□ 2.14
ACSS2-222	ENST00000493805	CCDC61	Q9Y6R9	512 aa		28.39	■■■□□ 2.14
ACSS2-222	ENST00000493805	EVC2	Q86UK5	1308 aa		28.39	■■■□□ 2.13
ACSS2-222	ENST00000493805	ST20-MTHFS	A0A0A6YYL1	179 aa		28.38	■■■□□ 2.13
ACSS2-222	ENST00000493805	SRPK2	P78362	688 aa	Known RBP	28.38	■■■□□ 2.13
ACSS2-222	ENST00000493805	KRT28	Q7Z3Y7	464 aa		28.37	■■■□□ 2.13
ACSS2-222	ENST00000493805	TESK2	Q96S53	571 aa		28.37	■■■□□ 2.13
ACSS2-222	ENST00000493805	SHPRH	Q149N8	1683 aa		28.37	■■■□□ 2.13
ACSS2-222	ENST00000493805	TOPAZ1	Q8N9V7	1692 aa		28.36	■■■□□ 2.13
ACSS2-222	ENST00000493805	ITSN1	Q15811	1721 aa		28.36	■■■□□ 2.13
ACSS2-222	ENST00000493805	PLEKHG3	A1L390	1219 aa		28.35	■■■□□ 2.13
ACSS2-222	ENST00000493805	PHF23	Q9BUL5	403 aa	Predicted RBP	28.34	■■■□□ 2.13
ACSS2-222	ENST00000493805	PNPLA6	Q8IY17	1366 aa		28.34	■■■□□ 2.13
ACSS2-222	ENST00000493805	USP47	Q96K76	1375 aa		28.34	■■■□□ 2.13
ACSS2-222	ENST00000493805	PSME1	Q06323	249 aa		28.33	■■■□□ 2.13
ACSS2-222	ENST00000493805	SPATA31A6	Q5VVP1	1343 aa		28.31	■■■□□ 2.12
ACSS2-222	ENST00000493805	SPATA31A3	Q5VYP0	1347 aa		28.3	■■■□□ 2.12
ACSS2-222	ENST00000493805	POLR3A	O14802	1390 aa	Predicted RBP	28.29	■■■□□ 2.12
ACSS2-222	ENST00000493805	NGDN	Q8NEJ9	315 aa	Known RBP	28.29	■■■□□ 2.12
ACSS2-222	ENST00000493805	PPIP5K1	Q6PFW1	1433 aa		28.28	■■■□□ 2.12
ACSS2-222	ENST00000493805	SBNO1	A3KN83	1393 aa		28.27	■■■□□ 2.12
ACSS2-222	ENST00000493805	ACE	P12821	1306 aa		28.27	■■■□□ 2.12
ACSS2-222	ENST00000493805	CABP1	Q9NZU7	370 aa		28.27	■■■□□ 2.12
ACSS2-222	ENST00000493805	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.26	■■■□□ 2.11
ACSS2-222	ENST00000493805	LRP6	O75581	1613 aa		28.25	■■■□□ 2.11
ACSS2-222	ENST00000493805	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.25	■■■□□ 2.11
ACSS2-222	ENST00000493805	SLC24A1	O60721	1099 aa		28.24	■■■□□ 2.11
ACSS2-222	ENST00000493805	PUS7	Q96PZ0	661 aa	Known RBP	28.24	■■■□□ 2.11
ACSS2-222	ENST00000493805	ATAD2	Q6PL18	1390 aa		28.22	■■■□□ 2.11
ACSS2-222	ENST00000493805	TNS3	Q68CZ2	1445 aa		28.21	■■■□□ 2.11
ACSS2-222	ENST00000493805	RGS17	Q9UGC6	210 aa	Predicted RBP	28.21	■■■□□ 2.11
ACSS2-222	ENST00000493805	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.2	■■■□□ 2.1
ACSS2-222	ENST00000493805	NUTM2E	B1AL46	878 aa	Predicted RBP	28.2	■■■□□ 2.1
ACSS2-222	ENST00000493805	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.2	■■■□□ 2.1
ACSS2-222	ENST00000493805	ALS2	Q96Q42	1657 aa		28.19	■■■□□ 2.1
ACSS2-222	ENST00000493805	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.16	■■■□□ 2.1
ACSS2-222	ENST00000493805	HSPA5	P11021	654 aa	Known RBP	28.15	■■■□□ 2.1
ACSS2-222	ENST00000493805	TMF1	P82094	1093 aa		28.15	■■■□□ 2.1
ACSS2-222	ENST00000493805	ARHGEF10	O15013	1369 aa		28.14	■■■□□ 2.1
ACSS2-222	ENST00000493805	CPSF1	Q10570	1443 aa	Known RBP	28.14	■■■□□ 2.1
ACSS2-222	ENST00000493805	SSH2	Q76I76	1423 aa		28.13	■■■□□ 2.09
ACSS2-222	ENST00000493805	PAK3	O75914	559 aa	Predicted RBP	28.13	■■■□□ 2.09
ACSS2-222	ENST00000493805	SLC12A5	Q9H2X9	1139 aa		28.13	■■■□□ 2.09
ACSS2-222	ENST00000493805	AKAP12	Q02952	1782 aa		28.12	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms