RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TAX1BP1Q86VP1 789 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.42□□□□□ -0.9
BRCA1-221ENST00000493795 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-221ENST00000493795 TNIKQ9UKE5 1360 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 TXLNAP40222 546 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 HSP90AB4PQ58FF6 505 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 RRP7AQ9Y3A4 280 aaKnown RBP9.41□□□□□ -0.9
BRCA1-221ENST00000493795 PSMA5P28066 241 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
BRCA1-221ENST00000493795 NGEFQ8N5V2 710 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 PDCL3Q9H2J4 239 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 KIF15Q9NS87 1388 aa9.41□□□□□ -0.9
BRCA1-221ENST00000493795 ELL2O00472 640 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-221ENST00000493795 KRT18P05783 430 aaKnown RBP9.4□□□□□ -0.9
BRCA1-221ENST00000493795 IQCEQ6IPM2 695 aa9.4□□□□□ -0.9
BRCA1-221ENST00000493795 API5Q9BZZ5 524 aaKnown RBP9.4□□□□□ -0.9
BRCA1-221ENST00000493795 EVA1CP58658 441 aa9.4□□□□□ -0.9
BRCA1-221ENST00000493795 CCDC112Q8NEF3 446 aa9.4□□□□□ -0.9
BRCA1-221ENST00000493795 CCDC97Q96F63 343 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-221ENST00000493795 KINO60870 393 aaKnown RBP9.4□□□□□ -0.9
BRCA1-221ENST00000493795 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.91
BRCA1-221ENST00000493795 RRP1P56182 461 aaKnown RBP9.4□□□□□ -0.91
BRCA1-221ENST00000493795 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-221ENST00000493795 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-221ENST00000493795 MEX3CQ5U5Q3 659 aaKnown RBP9.39□□□□□ -0.91
BRCA1-221ENST00000493795 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 BCL2L13Q9BXK5 485 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
BRCA1-221ENST00000493795 SART3Q15020 963 aaKnown RBP9.39□□□□□ -0.91
BRCA1-221ENST00000493795 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 SLC26A8Q96RN1 970 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
BRCA1-221ENST00000493795 FYB1O15117 783 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 NF2P35240 595 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
BRCA1-221ENST00000493795 MBD3O95983 291 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 DESP17661 470 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 NEBLO76041 1014 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 CCDC27Q2M243 656 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 PPFIBP1Q86W92 1011 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 COG3Q96JB2 828 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 ZNF396Q96N95 335 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-221ENST00000493795 FANCIQ9NVI1 1328 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 CAVIN1Q6NZI2 390 aaKnown RBP9.38□□□□□ -0.91
BRCA1-221ENST00000493795 RNF214Q8ND24 703 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 STAMBPO95630 424 aa9.38□□□□□ -0.91
BRCA1-221ENST00000493795 EXOC6Q8TAG9 804 aa9.37□□□□□ -0.91
BRCA1-221ENST00000493795 SEPT11Q9NVA2 429 aaKnown RBP9.37□□□□□ -0.91
BRCA1-221ENST00000493795 LRRCC1Q9C099 1032 aa9.37□□□□□ -0.91
BRCA1-221ENST00000493795 PODXL2Q9NZ53 605 aa9.37□□□□□ -0.91
BRCA1-221ENST00000493795 STIM1Q13586 685 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 SERPINC1P01008 464 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 FAM193AP78312 1265 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 FOXD1Q16676 465 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 C22orf23Q9BZE7 217 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 NUP155O75694 1391 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 PLIN1O60240 522 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
BRCA1-221ENST00000493795 CEP63Q96MT8 703 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 CDC45O75419 566 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 SLC3A2P08195 630 aaKnown RBP9.36□□□□□ -0.91
BRCA1-221ENST00000493795 PPM1EQ8WY54 764 aa9.36□□□□□ -0.91
BRCA1-221ENST00000493795 RBM10P98175 930 aaKnown RBP9.36□□□□□ -0.91
BRCA1-221ENST00000493795 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
BRCA1-221ENST00000493795 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 CBFA2T2O43439 604 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 MPHOSPH9Q99550 1183 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 BAZ1BQ9UIG0 1483 aaKnown RBP9.35□□□□□ -0.91
BRCA1-221ENST00000493795 NEUROD6Q96NK8 337 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
BRCA1-221ENST00000493795 MAP2K1Q02750 393 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-221ENST00000493795 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-221ENST00000493795 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 GOLGA6L10A0A0M3HER8 536 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 PDCP20941 246 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 CNTROBQ8N137 903 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 ANKRD30AQ9BXX3 1397 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 STK38Q15208 465 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.911e-6■■■■■ 58.5
BRCA1-221ENST00000493795 KDM4AO75164 1064 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 CCDC102AQ96A19 550 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 SHTN1A0MZ66 631 aa9.34□□□□□ -0.91
BRCA1-221ENST00000493795 WASHC2AQ641Q2 1341 aa9.34□□□□□ -0.92
BRCA1-221ENST00000493795 KIF3BO15066 747 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 SPATA24Q86W54 205 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 SPC24Q8NBT2 197 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 ATP2B1P20020 1258 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 TAF4BQ92750 862 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 TRAK2O60296 914 aa9.33□□□□□ -0.92
BRCA1-221ENST00000493795 NFKBIBQ15653 356 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms