RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
PDCD11-206ENST00000493610 DLC1Q96QB1 1528 aa19.96■□□□□ 0.79
PDCD11-206ENST00000493610 ILDR2Q71H61 639 aa19.94■□□□□ 0.78
PDCD11-206ENST00000493610 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
PDCD11-206ENST00000493610 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
PDCD11-206ENST00000493610 FMN2Q9NZ56 1722 aa19.92■□□□□ 0.78
PDCD11-206ENST00000493610 KIAA1210Q9ULL0 1709 aa19.91■□□□□ 0.78
PDCD11-206ENST00000493610 ORAI2Q96SN7 254 aa19.91■□□□□ 0.78
PDCD11-206ENST00000493610 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
PDCD11-206ENST00000493610 ARHGEF28Q8N1W1 1705 aaKnown RBP19.89■□□□□ 0.77
PDCD11-206ENST00000493610 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
PDCD11-206ENST00000493610 JCADQ9P266 1359 aa19.88■□□□□ 0.77
PDCD11-206ENST00000493610 PRAM1Q96QH2 718 aa19.88■□□□□ 0.77
PDCD11-206ENST00000493610 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
PDCD11-206ENST00000493610 LRP6O75581 1613 aa19.87■□□□□ 0.77
PDCD11-206ENST00000493610 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
PDCD11-206ENST00000493610 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
PDCD11-206ENST00000493610 RGS17Q9UGC6 210 aaPredicted RBP19.86■□□□□ 0.77
PDCD11-206ENST00000493610 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
PDCD11-206ENST00000493610 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
PDCD11-206ENST00000493610 SOS2Q07890 1332 aaPredicted RBP19.83■□□□□ 0.77
PDCD11-206ENST00000493610 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
PDCD11-206ENST00000493610 NUTM2FA1L443 756 aa19.82■□□□□ 0.76
PDCD11-206ENST00000493610 PXDNQ92626 1479 aa19.81■□□□□ 0.76
PDCD11-206ENST00000493610 TRPM1Q7Z4N2 1603 aa19.81■□□□□ 0.76
PDCD11-206ENST00000493610 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
PDCD11-206ENST00000493610 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
PDCD11-206ENST00000493610 ESCO1Q5FWF5 840 aa19.78■□□□□ 0.76
PDCD11-206ENST00000493610 SPATA31A6Q5VVP1 1343 aa19.77■□□□□ 0.76
PDCD11-206ENST00000493610 PRR36Q9H6K5 1346 aa19.77■□□□□ 0.76
PDCD11-206ENST00000493610 NBPF8Q3BBV2 869 aa19.77■□□□□ 0.76
PDCD11-206ENST00000493610 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.76
PDCD11-206ENST00000493610 POGKQ9P215 609 aa19.77■□□□□ 0.76
PDCD11-206ENST00000493610 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
PDCD11-206ENST00000493610 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
PDCD11-206ENST00000493610 FOXO3O43524 673 aa19.75■□□□□ 0.75
PDCD11-206ENST00000493610 LRRC59Q96AG4 307 aaKnown RBP19.75■□□□□ 0.75
PDCD11-206ENST00000493610 COL22A1Q8NFW1 1626 aaPredicted RBP19.75■□□□□ 0.75
PDCD11-206ENST00000493610 ANKARQ7Z5J8 1434 aa19.74■□□□□ 0.75
PDCD11-206ENST00000493610 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
PDCD11-206ENST00000493610 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
PDCD11-206ENST00000493610 WASLO00401 505 aaPredicted RBP19.72■□□□□ 0.75
PDCD11-206ENST00000493610 POTEAQ6S8J7 498 aa19.72■□□□□ 0.75
PDCD11-206ENST00000493610 NPHP3Q7Z494 1330 aa19.72■□□□□ 0.75
PDCD11-206ENST00000493610 ATP7BP35670 1465 aa19.71■□□□□ 0.75
PDCD11-206ENST00000493610 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
PDCD11-206ENST00000493610 PHF8Q9UPP1 1060 aa19.7■□□□□ 0.74
PDCD11-206ENST00000493610 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
PDCD11-206ENST00000493610 TRPM3Q9HCF6 1732 aaPredicted RBP19.68■□□□□ 0.74
PDCD11-206ENST00000493610 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
PDCD11-206ENST00000493610 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
PDCD11-206ENST00000493610 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
PDCD11-206ENST00000493610 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
PDCD11-206ENST00000493610 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
PDCD11-206ENST00000493610 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
PDCD11-206ENST00000493610 SPATA31A3Q5VYP0 1347 aa19.66■□□□□ 0.74
PDCD11-206ENST00000493610 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
PDCD11-206ENST00000493610 PMFBP1Q8TBY8 1022 aa19.65■□□□□ 0.74
PDCD11-206ENST00000493610 CDK19Q9BWU1 502 aa19.64■□□□□ 0.73
PDCD11-206ENST00000493610 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
PDCD11-206ENST00000493610 ROCK2O75116 1388 aaKnown RBP19.63■□□□□ 0.73
PDCD11-206ENST00000493610 CENPJQ9HC77 1338 aaPredicted RBP19.63■□□□□ 0.73
PDCD11-206ENST00000493610 ITSN1Q15811 1721 aa19.62■□□□□ 0.73
PDCD11-206ENST00000493610 ALS2Q96Q42 1657 aa19.62■□□□□ 0.73
PDCD11-206ENST00000493610 EIF3AQ14152 1382 aaKnown RBP19.62■□□□□ 0.73
PDCD11-206ENST00000493610 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
PDCD11-206ENST00000493610 SOCS7O14512 581 aa19.62■□□□□ 0.73
PDCD11-206ENST00000493610 NUDT16Q96DE0 195 aaKnown RBP19.62■□□□□ 0.73
PDCD11-206ENST00000493610 TNS3Q68CZ2 1445 aa19.61■□□□□ 0.73
PDCD11-206ENST00000493610 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
PDCD11-206ENST00000493610 ABCA3Q99758 1704 aa19.61■□□□□ 0.73
PDCD11-206ENST00000493610 MARF1Q9Y4F3 1742 aaKnown RBP19.61■□□□□ 0.73
PDCD11-206ENST00000493610 AFF2P51816 1311 aa19.58■□□□□ 0.73
PDCD11-206ENST00000493610 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.72
PDCD11-206ENST00000493610 CRYBG1Q9Y4K1 1723 aa19.58■□□□□ 0.72
PDCD11-206ENST00000493610 POLR3AO14802 1390 aaPredicted RBP19.57■□□□□ 0.72
PDCD11-206ENST00000493610 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
PDCD11-206ENST00000493610 PLEKHG3A1L390 1219 aa19.55■□□□□ 0.72
PDCD11-206ENST00000493610 PSME1Q06323 249 aa19.55■□□□□ 0.72
PDCD11-206ENST00000493610 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
PDCD11-206ENST00000493610 CABP2Q9NPB3 220 aa19.55■□□□□ 0.72
PDCD11-206ENST00000493610 CCDC61Q9Y6R9 512 aa19.54■□□□□ 0.72
PDCD11-206ENST00000493610 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
PDCD11-206ENST00000493610 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
PDCD11-206ENST00000493610 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
PDCD11-206ENST00000493610 ACEP12821 1306 aa19.52■□□□□ 0.72
PDCD11-206ENST00000493610 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
PDCD11-206ENST00000493610 BCL9LQ86UU0 1499 aa19.52■□□□□ 0.72
PDCD11-206ENST00000493610 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
PDCD11-206ENST00000493610 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
PDCD11-206ENST00000493610 PPIP5K1Q6PFW1 1433 aa19.51■□□□□ 0.71
PDCD11-206ENST00000493610 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
PDCD11-206ENST00000493610 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
PDCD11-206ENST00000493610 SLIT2O94813 1529 aa19.5■□□□□ 0.71
PDCD11-206ENST00000493610 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
PDCD11-206ENST00000493610 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
PDCD11-206ENST00000493610 ATRNO75882 1429 aa19.48■□□□□ 0.71
PDCD11-206ENST00000493610 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
PDCD11-206ENST00000493610 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.47■□□□□ 0.71
PDCD11-206ENST00000493610 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms