RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 FNBP4Q8N3X1 1017 aaPredicted RBP32.34■■■□□ 2.77
PFDN4-205ENST00000493356 TRPC5Q9UL62 973 aaPredicted RBP32.33■■■□□ 2.77
PFDN4-205ENST00000493356 NPHP3Q7Z494 1330 aa32.31■■■□□ 2.76
PFDN4-205ENST00000493356 MYOM2P54296 1465 aa32.31■■■□□ 2.76
PFDN4-205ENST00000493356 ESCO1Q5FWF5 840 aa32.31■■■□□ 2.76
PFDN4-205ENST00000493356 ATAD2Q6PL18 1390 aa32.31■■■□□ 2.76
PFDN4-205ENST00000493356 PXDNQ92626 1479 aa32.3■■■□□ 2.76
PFDN4-205ENST00000493356 ATRNO75882 1429 aa32.3■■■□□ 2.76
PFDN4-205ENST00000493356 FOXD1Q16676 465 aa32.28■■■□□ 2.76
PFDN4-205ENST00000493356 ADGRF5Q8IZF2 1346 aa32.27■■■□□ 2.76
PFDN4-205ENST00000493356 MARF1Q9Y4F3 1742 aaKnown RBP32.26■■■□□ 2.76
PFDN4-205ENST00000493356 TECPR2O15040 1411 aa32.26■■■□□ 2.75
PFDN4-205ENST00000493356 IFT172Q9UG01 1749 aa32.24■■■□□ 2.75
PFDN4-205ENST00000493356 FOXO3O43524 673 aa32.24■■■□□ 2.75
PFDN4-205ENST00000493356 CCDC144AA2RUR9 1427 aa32.24■■■□□ 2.75
PFDN4-205ENST00000493356 SPATA31E1Q6ZUB1 1445 aa32.23■■■□□ 2.75
PFDN4-205ENST00000493356 XPCQ01831 940 aaPredicted RBP32.22■■■□□ 2.75
PFDN4-205ENST00000493356 STK26Q9P289 416 aa32.22■■■□□ 2.75
PFDN4-205ENST00000493356 BCL9LQ86UU0 1499 aa32.22■■■□□ 2.75
PFDN4-205ENST00000493356 LRPPRCP42704 1394 aaKnown RBP32.21■■■□□ 2.75
PFDN4-205ENST00000493356 SRCAPQ6ZRS2 3230 aa32.21■■■□□ 2.75
PFDN4-205ENST00000493356 WAPLQ7Z5K2 1190 aa32.21■■■□□ 2.75
PFDN4-205ENST00000493356 KNDC1Q76NI1 1749 aa32.2■■■□□ 2.75
PFDN4-205ENST00000493356 EP400Q96L91 3159 aa32.2■■■□□ 2.75
PFDN4-205ENST00000493356 RGL3Q3MIN7 710 aa32.2■■■□□ 2.75
PFDN4-205ENST00000493356 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
PFDN4-205ENST00000493356 NUTM2FA1L443 756 aa32.18■■■□□ 2.74
PFDN4-205ENST00000493356 ABCC11Q96J66 1382 aa32.18■■■□□ 2.74
PFDN4-205ENST00000493356 PLEKHH1Q9ULM0 1364 aa32.17■■■□□ 2.74
PFDN4-205ENST00000493356 FMN2Q9NZ56 1722 aa32.16■■■□□ 2.74
PFDN4-205ENST00000493356 TMEM132EQ6IEE7 984 aa32.15■■■□□ 2.74
PFDN4-205ENST00000493356 PIK3C2GO75747 1445 aa32.14■■■□□ 2.74
PFDN4-205ENST00000493356 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.12■■■□□ 2.73
PFDN4-205ENST00000493356 KIF1AQ12756 1690 aa32.12■■■□□ 2.73
PFDN4-205ENST00000493356 GJD4Q96KN9 370 aaPredicted RBP32.11■■■□□ 2.73
PFDN4-205ENST00000493356 MPHOSPH9Q99550 1183 aa32.1■■■□□ 2.73
PFDN4-205ENST00000493356 YTHDC2Q9H6S0 1430 aaKnown RBP32.09■■■□□ 2.73
PFDN4-205ENST00000493356 SPATA31A3Q5VYP0 1347 aa32.08■■■□□ 2.73
PFDN4-205ENST00000493356 SLIT2O94813 1529 aa32.06■■■□□ 2.72
PFDN4-205ENST00000493356 CCDC125Q86Z20 511 aa32.05■■■□□ 2.72
PFDN4-205ENST00000493356 GLI3P10071 1580 aa32.04■■■□□ 2.72
PFDN4-205ENST00000493356 UNC5CLQ8IV45 518 aa32.04■■■□□ 2.72
PFDN4-205ENST00000493356 USP32Q8NFA0 1604 aa32.04■■■□□ 2.72
PFDN4-205ENST00000493356 ZRANB1Q9UGI0 708 aa32.03■■■□□ 2.72
PFDN4-205ENST00000493356 RGPD8O14715 1765 aaPredicted RBP32.03■■■□□ 2.72
PFDN4-205ENST00000493356 RALGAPBQ86X10 1494 aa32.03■■■□□ 2.72
PFDN4-205ENST00000493356 KRT28Q7Z3Y7 464 aa32.02■■■□□ 2.72
PFDN4-205ENST00000493356 SIRT1Q96EB6 747 aa32.02■■■□□ 2.72
PFDN4-205ENST00000493356 C14orf93Q9H972 538 aaKnown RBP31.98■■■□□ 2.71
PFDN4-205ENST00000493356 TNS3Q68CZ2 1445 aa31.98■■■□□ 2.71
PFDN4-205ENST00000493356 PHF8Q9UPP1 1060 aa31.97■■■□□ 2.71
PFDN4-205ENST00000493356 NRXN1Q9ULB1 1477 aa31.97■■■□□ 2.71
PFDN4-205ENST00000493356 BRWD3Q6RI45 1802 aa31.96■■■□□ 2.71
PFDN4-205ENST00000493356 CFAP70Q5T0N1 1121 aa31.93■■■□□ 2.7
PFDN4-205ENST00000493356 DHX57Q6P158 1386 aaKnown RBP31.93■■■□□ 2.7
PFDN4-205ENST00000493356 PSME1Q06323 249 aa31.92■■■□□ 2.7
PFDN4-205ENST00000493356 PLCH1Q4KWH8 1693 aa31.92■■■□□ 2.7
PFDN4-205ENST00000493356 ABCA3Q99758 1704 aa31.92■■■□□ 2.7
PFDN4-205ENST00000493356 BLMP54132 1417 aaPredicted RBP31.92■■■□□ 2.7
PFDN4-205ENST00000493356 HAP1P54257 671 aaPredicted RBP31.91■■■□□ 2.7
PFDN4-205ENST00000493356 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
PFDN4-205ENST00000493356 NWD2Q9ULI1 1742 aa31.9■■■□□ 2.7
PFDN4-205ENST00000493356 SBNO1A3KN83 1393 aa31.9■■■□□ 2.7
PFDN4-205ENST00000493356 PRAM1Q96QH2 718 aa31.88■■■□□ 2.69
PFDN4-205ENST00000493356 SAFB2Q14151 953 aaKnown RBP eCLIP31.87■■■□□ 2.69
PFDN4-205ENST00000493356 VPS72Q15906 364 aa31.87■■■□□ 2.69
PFDN4-205ENST00000493356 SEPT12Q8IYM1 358 aa31.86■■■□□ 2.69
PFDN4-205ENST00000493356 ARHGEF10O15013 1369 aa31.85■■■□□ 2.69
PFDN4-205ENST00000493356 PLEKHG5O94827 1062 aa31.85■■■□□ 2.69
PFDN4-205ENST00000493356 DLC1Q96QB1 1528 aa31.85■■■□□ 2.69
PFDN4-205ENST00000493356 ACIN1Q9UKV3 1341 aaKnown RBP31.84■■■□□ 2.69
PFDN4-205ENST00000493356 LMOD2Q6P5Q4 547 aa31.84■■■□□ 2.69
PFDN4-205ENST00000493356 ANKARQ7Z5J8 1434 aa31.83■■■□□ 2.69
PFDN4-205ENST00000493356 ADGRB2O60241 1585 aa31.82■■■□□ 2.68
PFDN4-205ENST00000493356 ONECUT3O60422 494 aaPredicted RBP31.81■■■□□ 2.68
PFDN4-205ENST00000493356 DEFB132Q7Z7B7 95 aa31.81■■■□□ 2.68
PFDN4-205ENST00000493356 POGKQ9P215 609 aa31.8■■■□□ 2.68
PFDN4-205ENST00000493356 CCDC9Q9Y3X0 531 aaKnown RBP31.8■■■□□ 2.68
PFDN4-205ENST00000493356 PMFBP1Q8TBY8 1022 aa31.79■■■□□ 2.68
PFDN4-205ENST00000493356 ADGRB1O14514 1584 aa31.78■■■□□ 2.68
PFDN4-205ENST00000493356 TRPM3Q9HCF6 1732 aaPredicted RBP31.78■■■□□ 2.68
PFDN4-205ENST00000493356 FAM83GA6ND36 823 aa31.77■■■□□ 2.68
PFDN4-205ENST00000493356 NRAPQ86VF7 1730 aa31.76■■■□□ 2.67
PFDN4-205ENST00000493356 SF3B2Q13435 895 aaKnown RBP31.76■■■□□ 2.67
PFDN4-205ENST00000493356 KRT27Q7Z3Y8 459 aa31.75■■■□□ 2.67
PFDN4-205ENST00000493356 ALS2Q96Q42 1657 aa31.73■■■□□ 2.67
PFDN4-205ENST00000493356 HIRIP3Q9BW71 556 aaPredicted RBP31.71■■■□□ 2.67
PFDN4-205ENST00000493356 TRAK1Q9UPV9 953 aa31.7■■■□□ 2.67
PFDN4-205ENST00000493356 PRR36Q9H6K5 1346 aa31.69■■■□□ 2.66
PFDN4-205ENST00000493356 COL14A1Q05707 1796 aaKnown RBP31.68■■■□□ 2.66
PFDN4-205ENST00000493356 TULP4Q9NRJ4 1543 aa31.68■■■□□ 2.66
PFDN4-205ENST00000493356 EIF3AQ14152 1382 aaKnown RBP31.68■■■□□ 2.66
PFDN4-205ENST00000493356 GPRASP1Q5JY77 1395 aa31.68■■■□□ 2.66
PFDN4-205ENST00000493356 RAB3GAP2Q9H2M9 1393 aa31.68■■■□□ 2.66
PFDN4-205ENST00000493356 BTG4Q9NY30 223 aa31.67■■■□□ 2.66
PFDN4-205ENST00000493356 MINK1Q8N4C8 1332 aaPredicted RBP31.67■■■□□ 2.66
PFDN4-205ENST00000493356 A0A0G2JS52 829 aa31.66■■■□□ 2.66
PFDN4-205ENST00000493356 MYT1Q01538 1121 aa31.66■■■□□ 2.66
PFDN4-205ENST00000493356 FAM98CQ17RN3 349 aaKnown RBP31.66■■■□□ 2.66
PFDN4-205ENST00000493356 CRYBG1Q9Y4K1 1723 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms