RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
NF1-215ENST00000493220 NBPF8Q3BBV2 869 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
NF1-215ENST00000493220 PMFBP1Q8TBY8 1022 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 TMEM2Q9UHN6 1383 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 ERVK-7P63135 1459 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 CABP1Q9NZU7 370 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 TRPM2O94759 1503 aa8.11□□□□□ -1.11
NF1-215ENST00000493220 NPATQ14207 1427 aa8.11□□□□□ -1.11
NF1-215ENST00000493220 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
NF1-215ENST00000493220 RAPGEF4Q8WZA2 1011 aa8.11□□□□□ -1.11
NF1-215ENST00000493220 PHF8Q9UPP1 1060 aa8.11□□□□□ -1.11
NF1-215ENST00000493220 ARHGAP31Q2M1Z3 1444 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 PRAG1Q86YV5 1406 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 IQGAP3Q86VI3 1631 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 ZC3H13Q5T200 1668 aaKnown RBP8.1□□□□□ -1.11
NF1-215ENST00000493220 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 ARID3AQ99856 593 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 AGLP35573 1532 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 UNC13BO14795 1591 aa8.1□□□□□ -1.11
NF1-215ENST00000493220 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
NF1-215ENST00000493220 KCNA6P17658 529 aa8.09□□□□□ -1.11
NF1-215ENST00000493220 ZMYM4Q5VZL5 1548 aa8.09□□□□□ -1.11
NF1-215ENST00000493220 PLEKHG1Q9ULL1 1385 aa8.09□□□□□ -1.11
NF1-215ENST00000493220 DIP2CQ9Y2E4 1556 aa8.09□□□□□ -1.11
NF1-215ENST00000493220 LMTK3Q96Q04 1460 aa8.09□□□□□ -1.11
NF1-215ENST00000493220 NPHP4O75161 1426 aaPredicted RBP8.09□□□□□ -1.12
NF1-215ENST00000493220 KDM5CP41229 1560 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 HSPA2P54652 639 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 NSD2O96028 1365 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 IPO8O15397 1037 aaKnown RBP8.08□□□□□ -1.12
NF1-215ENST00000493220 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 C19orf44Q9H6X5 657 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 NLRP2Q9NX02 1062 aa8.08□□□□□ -1.12
NF1-215ENST00000493220 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
NF1-215ENST00000493220 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
NF1-215ENST00000493220 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
NF1-215ENST00000493220 PUS7Q96PZ0 661 aaKnown RBP8.07□□□□□ -1.12
NF1-215ENST00000493220 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 NPHP3Q7Z494 1330 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 YTHDC2Q9H6S0 1430 aaKnown RBP8.07□□□□□ -1.12
NF1-215ENST00000493220 KIF1BO60333 1816 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 A2ML1A8K2U0 1454 aa8.07□□□□□ -1.12
NF1-215ENST00000493220 PRDM15P57071 1507 aaPredicted RBP8.06□□□□□ -1.12
NF1-215ENST00000493220 PLEKHO1Q53GL0 409 aaPredicted RBP8.06□□□□□ -1.12
NF1-215ENST00000493220 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
NF1-215ENST00000493220 LMTK2Q8IWU2 1503 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 TEFQ10587 303 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 PDE3BQ13370 1112 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 KRT28Q7Z3Y7 464 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
NF1-215ENST00000493220 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
NF1-215ENST00000493220 NSD3Q9BZ95 1437 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 PDE4CQ08493 712 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 PRKRIP1Q9H875 184 aaPredicted RBP8.05□□□□□ -1.12
NF1-215ENST00000493220 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 CAMSAP1Q5T5Y3 1602 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 ABCA6Q8N139 1617 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 PTPRTO14522 1441 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 SPG7Q9UQ90 795 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 BRD4O60885 1362 aaPredicted RBP8.05□□□□□ -1.12
NF1-215ENST00000493220 MYOM2P54296 1465 aa8.05□□□□□ -1.12
NF1-215ENST00000493220 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
NF1-215ENST00000493220 SF3B2Q13435 895 aaKnown RBP8.04□□□□□ -1.12
NF1-215ENST00000493220 RUNDC1Q96C34 613 aa8.04□□□□□ -1.12
NF1-215ENST00000493220 CLTCQ00610 1675 aaKnown RBP8.04□□□□□ -1.12
NF1-215ENST00000493220 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
NF1-215ENST00000493220 PIK3R4Q99570 1358 aa8.04□□□□□ -1.12
NF1-215ENST00000493220 PPIP5K1Q6PFW1 1433 aa8.04□□□□□ -1.12
NF1-215ENST00000493220 HSP90AB1P08238 724 aaKnown RBP8.04□□□□□ -1.12
NF1-215ENST00000493220 STRN4Q9NRL3 753 aa8.04□□□□□ -1.12
NF1-215ENST00000493220 ADGRB3O60242 1522 aa8.03□□□□□ -1.12
NF1-215ENST00000493220 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
NF1-215ENST00000493220 CCDC136Q96JN2 1154 aa8.03□□□□□ -1.12
NF1-215ENST00000493220 UPF2Q9HAU5 1272 aaKnown RBP8.03□□□□□ -1.12
NF1-215ENST00000493220 HMGB1P09429 215 aaKnown RBP8.03□□□□□ -1.12
NF1-215ENST00000493220 FKBP8Q14318 412 aa8.02□□□□□ -1.13
NF1-215ENST00000493220 FRAT1Q92837 279 aaPredicted RBP8.02□□□□□ -1.13
NF1-215ENST00000493220 SPHKAPQ2M3C7 1700 aa8.02□□□□□ -1.13
NF1-215ENST00000493220 ANKRD36BQ8N2N9 1353 aa8.01□□□□□ -1.13
NF1-215ENST00000493220 A0A0U1RQG5 324 aaPredicted RBP8.01□□□□□ -1.13
NF1-215ENST00000493220 PPP2R1AP30153 589 aa8.01□□□□□ -1.13
NF1-215ENST00000493220 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
NF1-215ENST00000493220 ACEP12821 1306 aa8.01□□□□□ -1.13
NF1-215ENST00000493220 OS9Q13438 667 aaPredicted RBP8.01□□□□□ -1.13
NF1-215ENST00000493220 LRRC59Q96AG4 307 aaKnown RBP8.01□□□□□ -1.13
NF1-215ENST00000493220 CEP152O94986 1710 aa8.01□□□□□ -1.13
NF1-215ENST00000493220 E9PSI1 815 aa8.01□□□□□ -1.13
NF1-215ENST00000493220 MTHFSP49914 203 aa8□□□□□ -1.13
NF1-215ENST00000493220 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms