RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 MARF1Q9Y4F3 1742 aaKnown RBP23.45■■□□□ 1.34
EPHB4-209ENST00000492878 PXDNQ92626 1479 aa23.42■■□□□ 1.34
EPHB4-209ENST00000492878 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.4■■□□□ 1.34
EPHB4-209ENST00000492878 HFM1A2PYH4 1435 aa23.39■■□□□ 1.33
EPHB4-209ENST00000492878 KIF1BO60333 1816 aa23.38■■□□□ 1.33
EPHB4-209ENST00000492878 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
EPHB4-209ENST00000492878 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
EPHB4-209ENST00000492878 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
EPHB4-209ENST00000492878 BLMP54132 1417 aaPredicted RBP23.36■■□□□ 1.33
EPHB4-209ENST00000492878 GLI3P10071 1580 aa23.35■■□□□ 1.33
EPHB4-209ENST00000492878 SLIT2O94813 1529 aa23.33■■□□□ 1.33
EPHB4-209ENST00000492878 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
EPHB4-209ENST00000492878 LRP5O75197 1615 aa23.33■■□□□ 1.32
EPHB4-209ENST00000492878 RALGAPBQ86X10 1494 aa23.32■■□□□ 1.32
EPHB4-209ENST00000492878 ESCO1Q5FWF5 840 aa23.29■■□□□ 1.32
EPHB4-209ENST00000492878 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
EPHB4-209ENST00000492878 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
EPHB4-209ENST00000492878 RPGRIP1LQ68CZ1 1315 aa23.28■■□□□ 1.32
EPHB4-209ENST00000492878 PPLO60437 1756 aa23.27■■□□□ 1.32
EPHB4-209ENST00000492878 FOXO3O43524 673 aa23.26■■□□□ 1.31
EPHB4-209ENST00000492878 LRPPRCP42704 1394 aaKnown RBP23.26■■□□□ 1.31
EPHB4-209ENST00000492878 ITGAEP38570 1179 aa23.25■■□□□ 1.31
EPHB4-209ENST00000492878 USP32Q8NFA0 1604 aa23.24■■□□□ 1.31
EPHB4-209ENST00000492878 XPCQ01831 940 aaPredicted RBP23.24■■□□□ 1.31
EPHB4-209ENST00000492878 DEFB132Q7Z7B7 95 aa23.24■■□□□ 1.31
EPHB4-209ENST00000492878 TECPR2O15040 1411 aa23.24■■□□□ 1.31
EPHB4-209ENST00000492878 NAIPQ13075 1403 aa23.24■■□□□ 1.31
EPHB4-209ENST00000492878 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
EPHB4-209ENST00000492878 ONECUT3O60422 494 aaPredicted RBP23.21■■□□□ 1.31
EPHB4-209ENST00000492878 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
EPHB4-209ENST00000492878 SEPT12Q8IYM1 358 aa23.18■■□□□ 1.3
EPHB4-209ENST00000492878 FMN2Q9NZ56 1722 aa23.18■■□□□ 1.3
EPHB4-209ENST00000492878 CCDC144AA2RUR9 1427 aa23.17■■□□□ 1.3
EPHB4-209ENST00000492878 NWD2Q9ULI1 1742 aa23.17■■□□□ 1.3
EPHB4-209ENST00000492878 VPS72Q15906 364 aa23.17■■□□□ 1.3
EPHB4-209ENST00000492878 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
EPHB4-209ENST00000492878 PLCH1Q4KWH8 1693 aa23.15■■□□□ 1.3
EPHB4-209ENST00000492878 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
EPHB4-209ENST00000492878 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
EPHB4-209ENST00000492878 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
EPHB4-209ENST00000492878 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
EPHB4-209ENST00000492878 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
EPHB4-209ENST00000492878 TNS3Q68CZ2 1445 aa23.11■■□□□ 1.29
EPHB4-209ENST00000492878 NUTM2FA1L443 756 aa23.11■■□□□ 1.29
EPHB4-209ENST00000492878 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
EPHB4-209ENST00000492878 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
EPHB4-209ENST00000492878 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
EPHB4-209ENST00000492878 HRCP23327 699 aa23.1■■□□□ 1.29
EPHB4-209ENST00000492878 KRT28Q7Z3Y7 464 aa23.1■■□□□ 1.29
EPHB4-209ENST00000492878 IFT172Q9UG01 1749 aa23.08■■□□□ 1.28
EPHB4-209ENST00000492878 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
EPHB4-209ENST00000492878 STK26Q9P289 416 aa23.06■■□□□ 1.28
EPHB4-209ENST00000492878 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
EPHB4-209ENST00000492878 NRAPQ86VF7 1730 aa23.05■■□□□ 1.28
EPHB4-209ENST00000492878 PSDA5PKW4 1024 aaPredicted RBP23.05■■□□□ 1.28
EPHB4-209ENST00000492878 RGPD8O14715 1765 aaPredicted RBP23.04■■□□□ 1.28
EPHB4-209ENST00000492878 BAG6P46379 1132 aa23.04■■□□□ 1.28
EPHB4-209ENST00000492878 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
EPHB4-209ENST00000492878 SIRT1Q96EB6 747 aa23.04■■□□□ 1.28
EPHB4-209ENST00000492878 PIK3C2GO75747 1445 aa23.04■■□□□ 1.28
EPHB4-209ENST00000492878 ANKRD30BQ9BXX2 1392 aa23.03■■□□□ 1.28
EPHB4-209ENST00000492878 YTHDC2Q9H6S0 1430 aaKnown RBP23.03■■□□□ 1.28
EPHB4-209ENST00000492878 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
EPHB4-209ENST00000492878 PSME1Q06323 249 aa23.02■■□□□ 1.28
EPHB4-209ENST00000492878 SLC4A1APQ9BWU0 796 aaKnown RBP23.02■■□□□ 1.28
EPHB4-209ENST00000492878 PHF8Q9UPP1 1060 aa23.02■■□□□ 1.28
EPHB4-209ENST00000492878 RGPD1P0DJD0 1748 aa23.02■■□□□ 1.28
EPHB4-209ENST00000492878 ARHGEF10O15013 1369 aa23.01■■□□□ 1.27
EPHB4-209ENST00000492878 DISP2A7MBM2 1401 aa23.01■■□□□ 1.27
EPHB4-209ENST00000492878 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
EPHB4-209ENST00000492878 TMEM132EQ6IEE7 984 aa23.01■■□□□ 1.27
EPHB4-209ENST00000492878 HAP1P54257 671 aaPredicted RBP23■■□□□ 1.27
EPHB4-209ENST00000492878 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
EPHB4-209ENST00000492878 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
EPHB4-209ENST00000492878 EN1Q05925 392 aaPredicted RBP22.95■■□□□ 1.26
EPHB4-209ENST00000492878 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.26
EPHB4-209ENST00000492878 TRPM3Q9HCF6 1732 aaPredicted RBP22.95■■□□□ 1.26
EPHB4-209ENST00000492878 THSD7AQ9UPZ6 1657 aa22.95■■□□□ 1.26
EPHB4-209ENST00000492878 COL14A1Q05707 1796 aaKnown RBP22.94■■□□□ 1.26
EPHB4-209ENST00000492878 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
EPHB4-209ENST00000492878 R3HDM1Q15032 1099 aaKnown RBP22.92■■□□□ 1.26
EPHB4-209ENST00000492878 RGL3Q3MIN7 710 aa22.92■■□□□ 1.26
EPHB4-209ENST00000492878 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
EPHB4-209ENST00000492878 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
EPHB4-209ENST00000492878 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
EPHB4-209ENST00000492878 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
EPHB4-209ENST00000492878 SPATA31A5Q5VU36 1347 aa22.9■■□□□ 1.26
EPHB4-209ENST00000492878 SPATA31A7Q8IWB4 1347 aa22.9■■□□□ 1.26
EPHB4-209ENST00000492878 CRYBG1Q9Y4K1 1723 aa22.89■■□□□ 1.26
EPHB4-209ENST00000492878 A0A0G2JS52 829 aa22.89■■□□□ 1.25
EPHB4-209ENST00000492878 MYT1Q01538 1121 aa22.89■■□□□ 1.25
EPHB4-209ENST00000492878 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
EPHB4-209ENST00000492878 ADGRB2O60241 1585 aa22.89■■□□□ 1.25
EPHB4-209ENST00000492878 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
EPHB4-209ENST00000492878 FAM182BQ5T319 152 aa22.87■■□□□ 1.25
EPHB4-209ENST00000492878 CAMKK2Q96RR4 588 aa22.86■■□□□ 1.25
EPHB4-209ENST00000492878 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
EPHB4-209ENST00000492878 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
EPHB4-209ENST00000492878 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
EPHB4-209ENST00000492878 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms