RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 WAPLQ7Z5K2 1190 aa27.37■■□□□ 1.97
CHD1L-209ENST00000492728 NUTM2AQ8IVF1 878 aaPredicted RBP27.37■■□□□ 1.97
CHD1L-209ENST00000492728 MYOM2P54296 1465 aa27.37■■□□□ 1.97
CHD1L-209ENST00000492728 MEX3CQ5U5Q3 659 aaKnown RBP27.36■■□□□ 1.97
CHD1L-209ENST00000492728 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
CHD1L-209ENST00000492728 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
CHD1L-209ENST00000492728 YTHDC2Q9H6S0 1430 aaKnown RBP27.34■■□□□ 1.97
CHD1L-209ENST00000492728 LRRC59Q96AG4 307 aaKnown RBP27.34■■□□□ 1.97
CHD1L-209ENST00000492728 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
CHD1L-209ENST00000492728 C14orf93Q9H972 538 aaKnown RBP27.3■■□□□ 1.96
CHD1L-209ENST00000492728 CFAP70Q5T0N1 1121 aa27.29■■□□□ 1.96
CHD1L-209ENST00000492728 PXDNQ92626 1479 aa27.26■■□□□ 1.95
CHD1L-209ENST00000492728 ZNF772Q68DY9 489 aaPredicted RBP27.26■■□□□ 1.95
CHD1L-209ENST00000492728 FMN2Q9NZ56 1722 aa27.26■■□□□ 1.95
CHD1L-209ENST00000492728 AFF2P51816 1311 aa27.25■■□□□ 1.95
CHD1L-209ENST00000492728 NUTM2FA1L443 756 aa27.24■■□□□ 1.95
CHD1L-209ENST00000492728 ESCO1Q5FWF5 840 aa27.24■■□□□ 1.95
CHD1L-209ENST00000492728 ADGRB1O14514 1584 aa27.23■■□□□ 1.95
CHD1L-209ENST00000492728 COL22A1Q8NFW1 1626 aaPredicted RBP27.23■■□□□ 1.95
CHD1L-209ENST00000492728 C8orf37Q96NL8 207 aa27.21■■□□□ 1.95
CHD1L-209ENST00000492728 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
CHD1L-209ENST00000492728 SIRT1Q96EB6 747 aa27.19■■□□□ 1.94
CHD1L-209ENST00000492728 NPHP3Q7Z494 1330 aa27.18■■□□□ 1.94
CHD1L-209ENST00000492728 HRCP23327 699 aa27.18■■□□□ 1.94
CHD1L-209ENST00000492728 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
CHD1L-209ENST00000492728 FOXO3O43524 673 aa27.17■■□□□ 1.94
CHD1L-209ENST00000492728 ADAMTS2O95450 1211 aa27.17■■□□□ 1.94
CHD1L-209ENST00000492728 DLC1Q96QB1 1528 aa27.16■■□□□ 1.94
CHD1L-209ENST00000492728 PRAM1Q96QH2 718 aa27.15■■□□□ 1.94
CHD1L-209ENST00000492728 SAFB2Q14151 953 aaKnown RBP eCLIP27.14■■□□□ 1.94
CHD1L-209ENST00000492728 KIF1AQ12756 1690 aa27.14■■□□□ 1.93
CHD1L-209ENST00000492728 RXRBP28702 533 aa27.13■■□□□ 1.93
CHD1L-209ENST00000492728 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
CHD1L-209ENST00000492728 RGPD8O14715 1765 aaPredicted RBP27.12■■□□□ 1.93
CHD1L-209ENST00000492728 KDM2AQ9Y2K7 1162 aa27.12■■□□□ 1.93
CHD1L-209ENST00000492728 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
CHD1L-209ENST00000492728 ADGRB2O60241 1585 aa27.1■■□□□ 1.93
CHD1L-209ENST00000492728 RGS12O14924 1447 aa27.1■■□□□ 1.93
CHD1L-209ENST00000492728 USP32Q8NFA0 1604 aa27.1■■□□□ 1.93
CHD1L-209ENST00000492728 NGLY1Q96IV0 654 aa27.08■■□□□ 1.93
CHD1L-209ENST00000492728 QTRT2Q9H974 415 aaKnown RBP27.07■■□□□ 1.92
CHD1L-209ENST00000492728 TRAK1Q9UPV9 953 aa27.06■■□□□ 1.92
CHD1L-209ENST00000492728 SPATA31A3Q5VYP0 1347 aa27.04■■□□□ 1.92
CHD1L-209ENST00000492728 FNBP4Q8N3X1 1017 aaPredicted RBP27.03■■□□□ 1.92
CHD1L-209ENST00000492728 POGKQ9P215 609 aa27.03■■□□□ 1.92
CHD1L-209ENST00000492728 PHF8Q9UPP1 1060 aa27.03■■□□□ 1.92
CHD1L-209ENST00000492728 MARF1Q9Y4F3 1742 aaKnown RBP27.03■■□□□ 1.92
CHD1L-209ENST00000492728 RBM6P78332 1123 aaKnown RBP27.02■■□□□ 1.92
CHD1L-209ENST00000492728 UPF1Q92900 1129 aaKnown RBP eCLIP27.02■■□□□ 1.92
CHD1L-209ENST00000492728 ATRNO75882 1429 aa27.01■■□□□ 1.91
CHD1L-209ENST00000492728 ANKARQ7Z5J8 1434 aa27.01■■□□□ 1.91
CHD1L-209ENST00000492728 KRT28Q7Z3Y7 464 aa27.01■■□□□ 1.91
CHD1L-209ENST00000492728 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
CHD1L-209ENST00000492728 USP21Q9UK80 565 aa27.01■■□□□ 1.91
CHD1L-209ENST00000492728 ARHGEF28Q8N1W1 1705 aaKnown RBP27■■□□□ 1.91
CHD1L-209ENST00000492728 BCL9LQ86UU0 1499 aa27■■□□□ 1.91
CHD1L-209ENST00000492728 TNS3Q68CZ2 1445 aa26.99■■□□□ 1.91
CHD1L-209ENST00000492728 MINK1Q8N4C8 1332 aaPredicted RBP26.99■■□□□ 1.91
CHD1L-209ENST00000492728 PRR36Q9H6K5 1346 aa26.98■■□□□ 1.91
CHD1L-209ENST00000492728 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
CHD1L-209ENST00000492728 TULP4Q9NRJ4 1543 aa26.96■■□□□ 1.91
CHD1L-209ENST00000492728 PMFBP1Q8TBY8 1022 aa26.95■■□□□ 1.9
CHD1L-209ENST00000492728 ABCA3Q99758 1704 aa26.95■■□□□ 1.9
CHD1L-209ENST00000492728 TRPC5Q9UL62 973 aaPredicted RBP26.94■■□□□ 1.9
CHD1L-209ENST00000492728 TRPM3Q9HCF6 1732 aaPredicted RBP26.93■■□□□ 1.9
CHD1L-209ENST00000492728 SBNO1A3KN83 1393 aa26.93■■□□□ 1.9
CHD1L-209ENST00000492728 SLIT2O94813 1529 aa26.92■■□□□ 1.9
CHD1L-209ENST00000492728 CABLES1Q8TDN4 633 aa26.91■■□□□ 1.9
CHD1L-209ENST00000492728 WASLO00401 505 aaPredicted RBP26.9■■□□□ 1.9
CHD1L-209ENST00000492728 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.9■■□□□ 1.9
CHD1L-209ENST00000492728 KIAA1210Q9ULL0 1709 aa26.9■■□□□ 1.9
CHD1L-209ENST00000492728 ATP7BP35670 1465 aa26.88■■□□□ 1.89
CHD1L-209ENST00000492728 PSME1Q06323 249 aa26.88■■□□□ 1.89
CHD1L-209ENST00000492728 PLEKHG5O94827 1062 aa26.87■■□□□ 1.89
CHD1L-209ENST00000492728 EIF3AQ14152 1382 aaKnown RBP26.86■■□□□ 1.89
CHD1L-209ENST00000492728 ALS2Q96Q42 1657 aa26.86■■□□□ 1.89
CHD1L-209ENST00000492728 GLI3P10071 1580 aa26.85■■□□□ 1.89
CHD1L-209ENST00000492728 NBPF1Q3BBV0 1214 aa26.85■■□□□ 1.89
CHD1L-209ENST00000492728 ARHGEF10O15013 1369 aa26.84■■□□□ 1.89
CHD1L-209ENST00000492728 PLCH1Q4KWH8 1693 aa26.84■■□□□ 1.89
CHD1L-209ENST00000492728 LMOD2Q6P5Q4 547 aa26.83■■□□□ 1.89
CHD1L-209ENST00000492728 RALGAPBQ86X10 1494 aa26.82■■□□□ 1.88
CHD1L-209ENST00000492728 UNC5CLQ8IV45 518 aa26.82■■□□□ 1.88
CHD1L-209ENST00000492728 GJD4Q96KN9 370 aaPredicted RBP26.81■■□□□ 1.88
CHD1L-209ENST00000492728 TOPAZ1Q8N9V7 1692 aa26.8■■□□□ 1.88
CHD1L-209ENST00000492728 EP400Q96L91 3159 aa26.8■■□□□ 1.88
CHD1L-209ENST00000492728 CRYBG1Q9Y4K1 1723 aa26.79■■□□□ 1.88
CHD1L-209ENST00000492728 ITSN1Q15811 1721 aa26.79■■□□□ 1.88
CHD1L-209ENST00000492728 HAP1P54257 671 aaPredicted RBP26.78■■□□□ 1.88
CHD1L-209ENST00000492728 GPRASP1Q5JY77 1395 aa26.78■■□□□ 1.88
CHD1L-209ENST00000492728 NWD2Q9ULI1 1742 aa26.77■■□□□ 1.88
CHD1L-209ENST00000492728 ATAD2Q6PL18 1390 aa26.77■■□□□ 1.88
CHD1L-209ENST00000492728 NUDT16Q96DE0 195 aaKnown RBP26.77■■□□□ 1.88
CHD1L-209ENST00000492728 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
CHD1L-209ENST00000492728 NGDNQ8NEJ9 315 aaKnown RBP26.75■■□□□ 1.87
CHD1L-209ENST00000492728 CDK19Q9BWU1 502 aa26.75■■□□□ 1.87
CHD1L-209ENST00000492728 NRAPQ86VF7 1730 aa26.74■■□□□ 1.87
CHD1L-209ENST00000492728 FAM83GA6ND36 823 aa26.74■■□□□ 1.87
CHD1L-209ENST00000492728 L3MBTL2Q969R5 705 aa26.74■■□□□ 1.87
CHD1L-209ENST00000492728 VPS72Q15906 364 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms