RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
SS18L1-205ENST00000492466 RXRBP28702 533 aa21.64■■□□□ 1.05
SS18L1-205ENST00000492466 WAPLQ7Z5K2 1190 aa21.64■■□□□ 1.05
SS18L1-205ENST00000492466 CDC42BPGQ6DT37 1551 aa21.64■■□□□ 1.05
SS18L1-205ENST00000492466 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
SS18L1-205ENST00000492466 TMEM132EQ6IEE7 984 aa21.63■■□□□ 1.05
SS18L1-205ENST00000492466 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
SS18L1-205ENST00000492466 STK26Q9P289 416 aa21.62■■□□□ 1.05
SS18L1-205ENST00000492466 CDK12Q9NYV4 1490 aaPredicted RBP21.62■■□□□ 1.05
SS18L1-205ENST00000492466 UPF1Q92900 1129 aaKnown RBP eCLIP21.61■■□□□ 1.05
SS18L1-205ENST00000492466 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
SS18L1-205ENST00000492466 ESCO1Q5FWF5 840 aa21.59■■□□□ 1.05
SS18L1-205ENST00000492466 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.05
SS18L1-205ENST00000492466 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.05
SS18L1-205ENST00000492466 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
SS18L1-205ENST00000492466 C14orf93Q9H972 538 aaKnown RBP21.58■■□□□ 1.05
SS18L1-205ENST00000492466 QTRT2Q9H974 415 aaKnown RBP21.58■■□□□ 1.05
SS18L1-205ENST00000492466 PXDNQ92626 1479 aa21.58■■□□□ 1.04
SS18L1-205ENST00000492466 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
SS18L1-205ENST00000492466 COL22A1Q8NFW1 1626 aaPredicted RBP21.57■■□□□ 1.04
SS18L1-205ENST00000492466 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
SS18L1-205ENST00000492466 FOXO3O43524 673 aa21.55■■□□□ 1.04
SS18L1-205ENST00000492466 RBM6P78332 1123 aaKnown RBP21.55■■□□□ 1.04
SS18L1-205ENST00000492466 SIRT1Q96EB6 747 aa21.55■■□□□ 1.04
SS18L1-205ENST00000492466 NGLY1Q96IV0 654 aa21.55■■□□□ 1.04
SS18L1-205ENST00000492466 RGS12O14924 1447 aa21.54■■□□□ 1.04
SS18L1-205ENST00000492466 MYOM2P54296 1465 aa21.53■■□□□ 1.04
SS18L1-205ENST00000492466 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
SS18L1-205ENST00000492466 FNBP4Q8N3X1 1017 aaPredicted RBP21.53■■□□□ 1.04
SS18L1-205ENST00000492466 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
SS18L1-205ENST00000492466 CFAP70Q5T0N1 1121 aa21.52■■□□□ 1.04
SS18L1-205ENST00000492466 EP400Q96L91 3159 aa21.52■■□□□ 1.03
SS18L1-205ENST00000492466 FMN2Q9NZ56 1722 aa21.51■■□□□ 1.03
SS18L1-205ENST00000492466 SRCAPQ6ZRS2 3230 aa21.49■■□□□ 1.03
SS18L1-205ENST00000492466 USP21Q9UK80 565 aa21.49■■□□□ 1.03
SS18L1-205ENST00000492466 HRCP23327 699 aa21.47■■□□□ 1.03
SS18L1-205ENST00000492466 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
SS18L1-205ENST00000492466 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
SS18L1-205ENST00000492466 ATRNO75882 1429 aa21.46■■□□□ 1.03
SS18L1-205ENST00000492466 BCL9LQ86UU0 1499 aa21.45■■□□□ 1.03
SS18L1-205ENST00000492466 TRPC5Q9UL62 973 aaPredicted RBP21.45■■□□□ 1.02
SS18L1-205ENST00000492466 SPATA31A3Q5VYP0 1347 aa21.45■■□□□ 1.02
SS18L1-205ENST00000492466 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
SS18L1-205ENST00000492466 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
SS18L1-205ENST00000492466 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
SS18L1-205ENST00000492466 KIF1AQ12756 1690 aa21.43■■□□□ 1.02
SS18L1-205ENST00000492466 MARF1Q9Y4F3 1742 aaKnown RBP21.43■■□□□ 1.02
SS18L1-205ENST00000492466 DLC1Q96QB1 1528 aa21.41■■□□□ 1.02
SS18L1-205ENST00000492466 KRT28Q7Z3Y7 464 aa21.41■■□□□ 1.02
SS18L1-205ENST00000492466 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
SS18L1-205ENST00000492466 PHF8Q9UPP1 1060 aa21.4■■□□□ 1.02
SS18L1-205ENST00000492466 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
SS18L1-205ENST00000492466 SLIT2O94813 1529 aa21.36■■□□□ 1.01
SS18L1-205ENST00000492466 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
SS18L1-205ENST00000492466 TNS3Q68CZ2 1445 aa21.35■■□□□ 1.01
SS18L1-205ENST00000492466 DCAF11Q8TEB1 546 aa21.34■■□□□ 1.01
SS18L1-205ENST00000492466 GJD4Q96KN9 370 aaPredicted RBP21.34■■□□□ 1.01
SS18L1-205ENST00000492466 POGKQ9P215 609 aa21.34■■□□□ 1.01
SS18L1-205ENST00000492466 TRAK1Q9UPV9 953 aa21.34■■□□□ 1.01
SS18L1-205ENST00000492466 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
SS18L1-205ENST00000492466 SBNO1A3KN83 1393 aa21.34■■□□□ 1.01
SS18L1-205ENST00000492466 ANKARQ7Z5J8 1434 aa21.33■■□□□ 1.01
SS18L1-205ENST00000492466 ATAD2Q6PL18 1390 aa21.33■■□□□ 1
SS18L1-205ENST00000492466 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
SS18L1-205ENST00000492466 PSME1Q06323 249 aa21.32■■□□□ 1
SS18L1-205ENST00000492466 UNC5CLQ8IV45 518 aa21.32■■□□□ 1
SS18L1-205ENST00000492466 CABLES1Q8TDN4 633 aa21.32■■□□□ 1
SS18L1-205ENST00000492466 PRR36Q9H6K5 1346 aa21.31■■□□□ 1
SS18L1-205ENST00000492466 PMFBP1Q8TBY8 1022 aa21.31■■□□□ 1
SS18L1-205ENST00000492466 STAC3Q96MF2 364 aa21.31■■□□□ 1
SS18L1-205ENST00000492466 HIRIP3Q9BW71 556 aaPredicted RBP21.31■■□□□ 1
SS18L1-205ENST00000492466 GLI3P10071 1580 aa21.3■■□□□ 1
SS18L1-205ENST00000492466 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
SS18L1-205ENST00000492466 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
SS18L1-205ENST00000492466 ABCA3Q99758 1704 aa21.26■□□□□ 0.99
SS18L1-205ENST00000492466 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
SS18L1-205ENST00000492466 ARHGEF10O15013 1369 aa21.26■□□□□ 0.99
SS18L1-205ENST00000492466 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
SS18L1-205ENST00000492466 TULP4Q9NRJ4 1543 aa21.25■□□□□ 0.99
SS18L1-205ENST00000492466 FAM83GA6ND36 823 aa21.23■□□□□ 0.99
SS18L1-205ENST00000492466 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
SS18L1-205ENST00000492466 ALS2Q96Q42 1657 aa21.22■□□□□ 0.99
SS18L1-205ENST00000492466 ARHGEF28Q8N1W1 1705 aaKnown RBP21.22■□□□□ 0.99
SS18L1-205ENST00000492466 NWD2Q9ULI1 1742 aa21.22■□□□□ 0.99
SS18L1-205ENST00000492466 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
SS18L1-205ENST00000492466 VPS72Q15906 364 aa21.22■□□□□ 0.99
SS18L1-205ENST00000492466 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
SS18L1-205ENST00000492466 ONECUT3O60422 494 aaPredicted RBP21.21■□□□□ 0.99
SS18L1-205ENST00000492466 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
SS18L1-205ENST00000492466 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
SS18L1-205ENST00000492466 CCDC125Q86Z20 511 aa21.19■□□□□ 0.98
SS18L1-205ENST00000492466 BRWD3Q6RI45 1802 aa21.19■□□□□ 0.98
SS18L1-205ENST00000492466 GPRASP1Q5JY77 1395 aa21.18■□□□□ 0.98
SS18L1-205ENST00000492466 ATP7BP35670 1465 aa21.18■□□□□ 0.98
SS18L1-205ENST00000492466 SEPT12Q8IYM1 358 aa21.17■□□□□ 0.98
SS18L1-205ENST00000492466 CRYBG1Q9Y4K1 1723 aa21.16■□□□□ 0.98
SS18L1-205ENST00000492466 NUDT16Q96DE0 195 aaKnown RBP21.16■□□□□ 0.98
SS18L1-205ENST00000492466 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
SS18L1-205ENST00000492466 NRAPQ86VF7 1730 aa21.15■□□□□ 0.98
SS18L1-205ENST00000492466 NEUROD1Q13562 356 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms