RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-214ENST00000491584 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-214ENST00000491584 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
PTPN7-214ENST00000491584 C1orf167Q5SNV9 1468 aa17.03■□□□□ 0.32
PTPN7-214ENST00000491584 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
PTPN7-214ENST00000491584 PPLO60437 1756 aa17.02■□□□□ 0.32
PTPN7-214ENST00000491584 STK26Q9P289 416 aa17.02■□□□□ 0.32
PTPN7-214ENST00000491584 PIK3C2GO75747 1445 aa17.02■□□□□ 0.31
PTPN7-214ENST00000491584 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
PTPN7-214ENST00000491584 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
PTPN7-214ENST00000491584 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
PTPN7-214ENST00000491584 SIRT1Q96EB6 747 aa17.01■□□□□ 0.31
PTPN7-214ENST00000491584 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN7-214ENST00000491584 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
PTPN7-214ENST00000491584 AFF2P51816 1311 aa16.98■□□□□ 0.31
PTPN7-214ENST00000491584 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
PTPN7-214ENST00000491584 POGKQ9P215 609 aa16.98■□□□□ 0.31
PTPN7-214ENST00000491584 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
PTPN7-214ENST00000491584 NUTM2BA6NNL0 878 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-214ENST00000491584 NUTM2EB1AL46 878 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-214ENST00000491584 NUTM2AQ8IVF1 878 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-214ENST00000491584 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
PTPN7-214ENST00000491584 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-214ENST00000491584 RGS12O14924 1447 aa16.96■□□□□ 0.3
PTPN7-214ENST00000491584 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-214ENST00000491584 RXRBP28702 533 aa16.95■□□□□ 0.3
PTPN7-214ENST00000491584 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
PTPN7-214ENST00000491584 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
PTPN7-214ENST00000491584 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
PTPN7-214ENST00000491584 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
PTPN7-214ENST00000491584 SRCAPQ6ZRS2 3230 aa16.94■□□□□ 0.3
PTPN7-214ENST00000491584 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
PTPN7-214ENST00000491584 EP400Q96L91 3159 aa16.93■□□□□ 0.3
PTPN7-214ENST00000491584 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
PTPN7-214ENST00000491584 TECPR2O15040 1411 aa16.91■□□□□ 0.3
PTPN7-214ENST00000491584 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
PTPN7-214ENST00000491584 CARD11Q9BXL7 1154 aa16.91■□□□□ 0.3
PTPN7-214ENST00000491584 PXDNQ92626 1479 aa16.91■□□□□ 0.3
PTPN7-214ENST00000491584 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
PTPN7-214ENST00000491584 C8orf37Q96NL8 207 aa16.9■□□□□ 0.3
PTPN7-214ENST00000491584 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
PTPN7-214ENST00000491584 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
PTPN7-214ENST00000491584 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
PTPN7-214ENST00000491584 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
PTPN7-214ENST00000491584 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
PTPN7-214ENST00000491584 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
PTPN7-214ENST00000491584 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
PTPN7-214ENST00000491584 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTPN7-214ENST00000491584 ATRNO75882 1429 aa16.85■□□□□ 0.29
PTPN7-214ENST00000491584 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
PTPN7-214ENST00000491584 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-214ENST00000491584 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
PTPN7-214ENST00000491584 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
PTPN7-214ENST00000491584 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
PTPN7-214ENST00000491584 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
PTPN7-214ENST00000491584 BCL9LQ86UU0 1499 aa16.82■□□□□ 0.28
PTPN7-214ENST00000491584 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
PTPN7-214ENST00000491584 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-214ENST00000491584 NGLY1Q96IV0 654 aa16.81■□□□□ 0.28
PTPN7-214ENST00000491584 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
PTPN7-214ENST00000491584 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
PTPN7-214ENST00000491584 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
PTPN7-214ENST00000491584 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
PTPN7-214ENST00000491584 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-214ENST00000491584 USP21Q9UK80 565 aa16.79■□□□□ 0.28
PTPN7-214ENST00000491584 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
PTPN7-214ENST00000491584 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
PTPN7-214ENST00000491584 RALGAPBQ86X10 1494 aa16.78■□□□□ 0.28
PTPN7-214ENST00000491584 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
PTPN7-214ENST00000491584 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-214ENST00000491584 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-214ENST00000491584 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
PTPN7-214ENST00000491584 FOXO3O43524 673 aa16.76■□□□□ 0.27
PTPN7-214ENST00000491584 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-214ENST00000491584 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
PTPN7-214ENST00000491584 SLIT2O94813 1529 aa16.75■□□□□ 0.27
PTPN7-214ENST00000491584 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
PTPN7-214ENST00000491584 GLI3P10071 1580 aa16.74■□□□□ 0.27
PTPN7-214ENST00000491584 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN7-214ENST00000491584 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
PTPN7-214ENST00000491584 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
PTPN7-214ENST00000491584 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PTPN7-214ENST00000491584 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
PTPN7-214ENST00000491584 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
PTPN7-214ENST00000491584 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
PTPN7-214ENST00000491584 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-214ENST00000491584 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
PTPN7-214ENST00000491584 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
PTPN7-214ENST00000491584 ABCA3Q99758 1704 aa16.72■□□□□ 0.27
PTPN7-214ENST00000491584 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
PTPN7-214ENST00000491584 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
PTPN7-214ENST00000491584 USP47Q96K76 1375 aa16.69■□□□□ 0.26
PTPN7-214ENST00000491584 TMF1P82094 1093 aa16.69■□□□□ 0.26
PTPN7-214ENST00000491584 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
PTPN7-214ENST00000491584 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
PTPN7-214ENST00000491584 TNS3Q68CZ2 1445 aa16.69■□□□□ 0.26
PTPN7-214ENST00000491584 PSME1Q06323 249 aa16.68■□□□□ 0.26
PTPN7-214ENST00000491584 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-214ENST00000491584 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
PTPN7-214ENST00000491584 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms