RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	BCL9L	Q86UU0	1499 aa		29.32	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	HFM1	A2PYH4	1435 aa		29.31	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	MYOM2	P54296	1465 aa		29.29	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	RPGRIP1L	Q68CZ1	1315 aa		29.29	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	FOXO3	O43524	673 aa		29.29	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.29	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	CLTCL1	P53675	1640 aa		29.27	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	LRPPRC	P42704	1394 aa	Known RBP	29.26	■■■□□ 2.28
CDK5RAP2-218	ENST00000491334	PRAG1	Q86YV5	1406 aa		29.26	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	XPC	Q01831	940 aa	Predicted RBP	29.24	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	UNC5CL	Q8IV45	518 aa		29.24	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	KIF1B	O60333	1816 aa		29.23	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	BLM	P54132	1417 aa	Predicted RBP	29.22	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	SF3B2	Q13435	895 aa	Known RBP	29.22	■■■□□ 2.27
CDK5RAP2-218	ENST00000491334	PXDN	Q92626	1479 aa		29.2	■■■□□ 2.26
CDK5RAP2-218	ENST00000491334	DEFB132	Q7Z7B7	95 aa		29.16	■■■□□ 2.26
CDK5RAP2-218	ENST00000491334	NUTM2F	A1L443	756 aa		29.15	■■■□□ 2.26
CDK5RAP2-218	ENST00000491334	RALGAPB	Q86X10	1494 aa		29.14	■■■□□ 2.26
CDK5RAP2-218	ENST00000491334	MARF1	Q9Y4F3	1742 aa	Known RBP	29.14	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	CDC42BPG	Q6DT37	1551 aa		29.13	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	SEPT12	Q8IYM1	358 aa		29.12	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	SPATA31A3	Q5VYP0	1347 aa		29.12	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	SLIT2	O94813	1529 aa		29.11	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	WAPL	Q7Z5K2	1190 aa		29.11	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	STK26	Q9P289	416 aa		29.11	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	NAIP	Q13075	1403 aa		29.11	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	HAP1	P54257	671 aa	Predicted RBP	29.09	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	KRT28	Q7Z3Y7	464 aa		29.08	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	29.08	■■■□□ 2.25
CDK5RAP2-218	ENST00000491334	VPS72	Q15906	364 aa		29.07	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.07	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	GLI3	P10071	1580 aa		29.06	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	ONECUT3	O60422	494 aa	Predicted RBP	29.06	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.06	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	CCDC9	Q9Y3X0	531 aa	Known RBP	29.05	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	PSME1	Q06323	249 aa		29.04	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	KRT27	Q7Z3Y8	459 aa		29.04	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	CCDC144A	A2RUR9	1427 aa		29.03	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	ADGRF5	Q8IZF2	1346 aa		29.02	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	ABCC11	Q96J66	1382 aa		29.01	■■■□□ 2.24
CDK5RAP2-218	ENST00000491334	TECPR2	O15040	1411 aa		29	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	PPL	O60437	1756 aa		29	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	BAG6	P46379	1132 aa		28.99	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	TMEM132E	Q6IEE7	984 aa		28.98	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	CABLES1	Q8TDN4	633 aa		28.98	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	BRWD3	Q6RI45	1802 aa		28.97	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	RGL3	Q3MIN7	710 aa		28.97	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	PHF8	Q9UPP1	1060 aa		28.96	■■■□□ 2.23
CDK5RAP2-218	ENST00000491334	PSD	A5PKW4	1024 aa	Predicted RBP	28.95	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	PLEKHG5	O94827	1062 aa		28.95	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	PLEKHH1	Q9ULM0	1364 aa		28.95	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	RRBP1	Q9P2E9	1410 aa	Known RBP	28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	USP32	Q8NFA0	1604 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334		A0A0G2JS52	829 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	HRC	P23327	699 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	MYT1	Q01538	1121 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	LMOD2	Q6P5Q4	547 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	SIRT1	Q96EB6	747 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	LRP5	O75197	1615 aa		28.94	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	ANKRD30B	Q9BXX2	1392 aa		28.93	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	TNS3	Q68CZ2	1445 aa		28.92	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	KIF1A	Q12756	1690 aa		28.92	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	FAM83G	A6ND36	823 aa		28.91	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	SBNO1	A3KN83	1393 aa		28.89	■■■□□ 2.22
CDK5RAP2-218	ENST00000491334	ARHGEF10	O15013	1369 aa		28.88	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	FMN2	Q9NZ56	1722 aa		28.88	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	FAM98C	Q17RN3	349 aa	Known RBP	28.86	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.86	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	NWD2	Q9ULI1	1742 aa		28.85	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	EN1	Q05925	392 aa	Predicted RBP	28.84	■■■□□ 2.21
CDK5RAP2-218	ENST00000491334	BTG4	Q9NY30	223 aa		28.82	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	SPATA31E1	Q6ZUB1	1445 aa		28.81	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	KNDC1	Q76NI1	1749 aa		28.8	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	PLCH1	Q4KWH8	1693 aa		28.8	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	PIK3C2G	O75747	1445 aa		28.79	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	C14orf93	Q9H972	538 aa	Known RBP	28.79	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	NRXN1	Q9ULB1	1477 aa		28.78	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	DHX57	Q6P158	1386 aa	Known RBP	28.78	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	R3HDM1	Q15032	1099 aa	Known RBP	28.78	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	PMFBP1	Q8TBY8	1022 aa		28.78	■■■□□ 2.2
CDK5RAP2-218	ENST00000491334	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	PRAM1	Q96QH2	718 aa		28.75	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	FAM182B	Q5T319	152 aa		28.74	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	RGPD8	O14715	1765 aa	Predicted RBP	28.74	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	POGK	Q9P215	609 aa		28.73	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	MPHOSPH9	Q99550	1183 aa		28.72	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	SPATA31A5	Q5VU36	1347 aa		28.71	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	SPATA31A7	Q8IWB4	1347 aa		28.71	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	CFAP70	Q5T0N1	1121 aa		28.71	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	IFT172	Q9UG01	1749 aa		28.7	■■■□□ 2.19
CDK5RAP2-218	ENST00000491334	GPRASP1	Q5JY77	1395 aa		28.69	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	ANKAR	Q7Z5J8	1434 aa		28.69	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	EZH2	Q15910	746 aa	Known RBP	28.68	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	DISP2	A7MBM2	1401 aa		28.68	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	ABCA3	Q99758	1704 aa		28.67	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	RGPD1	P0DJD0	1748 aa		28.66	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	FAM196A	Q6ZSG2	479 aa		28.65	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	CAMKK2	Q96RR4	588 aa		28.64	■■■□□ 2.18
CDK5RAP2-218	ENST00000491334	PRDM11	Q9NQV5	511 aa		28.63	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	NRAP	Q86VF7	1730 aa		28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms