RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 COL22A1Q8NFW1 1626 aaPredicted RBP28.14■■■□□ 2.09
PLXNA3-206ENST00000491066 NPHP3Q7Z494 1330 aa28.13■■■□□ 2.09
PLXNA3-206ENST00000491066 RRBP1Q9P2E9 1410 aaKnown RBP28.12■■■□□ 2.09
PLXNA3-206ENST00000491066 ESCO1Q5FWF5 840 aa28.12■■■□□ 2.09
PLXNA3-206ENST00000491066 MYOM2P54296 1465 aa28.1■■■□□ 2.09
PLXNA3-206ENST00000491066 FOXD1Q16676 465 aa28.09■■■□□ 2.09
PLXNA3-206ENST00000491066 SLC4A1APQ9BWU0 796 aaKnown RBP28.08■■■□□ 2.09
PLXNA3-206ENST00000491066 CCDC125Q86Z20 511 aa28.07■■■□□ 2.08
PLXNA3-206ENST00000491066 BCL9LQ86UU0 1499 aa28.07■■■□□ 2.08
PLXNA3-206ENST00000491066 FOXO3O43524 673 aa28.06■■■□□ 2.08
PLXNA3-206ENST00000491066 PXDNQ92626 1479 aa28.06■■■□□ 2.08
PLXNA3-206ENST00000491066 CDC42BPGQ6DT37 1551 aa28.06■■■□□ 2.08
PLXNA3-206ENST00000491066 PPLO60437 1756 aa28.05■■■□□ 2.08
PLXNA3-206ENST00000491066 ZRANB1Q9UGI0 708 aa28.05■■■□□ 2.08
PLXNA3-206ENST00000491066 LRPPRCP42704 1394 aaKnown RBP28.04■■■□□ 2.08
PLXNA3-206ENST00000491066 GJD4Q96KN9 370 aaPredicted RBP28.03■■■□□ 2.08
PLXNA3-206ENST00000491066 EP400Q96L91 3159 aa28.02■■■□□ 2.08
PLXNA3-206ENST00000491066 XPCQ01831 940 aaPredicted RBP28.01■■■□□ 2.07
PLXNA3-206ENST00000491066 ADGRF5Q8IZF2 1346 aa28■■■□□ 2.07
PLXNA3-206ENST00000491066 WAPLQ7Z5K2 1190 aa27.99■■■□□ 2.07
PLXNA3-206ENST00000491066 TECPR2O15040 1411 aa27.99■■■□□ 2.07
PLXNA3-206ENST00000491066 STK26Q9P289 416 aa27.98■■■□□ 2.07
PLXNA3-206ENST00000491066 MARF1Q9Y4F3 1742 aaKnown RBP27.96■■■□□ 2.07
PLXNA3-206ENST00000491066 ABCC11Q96J66 1382 aa27.96■■■□□ 2.07
PLXNA3-206ENST00000491066 NUTM2FA1L443 756 aa27.95■■■□□ 2.06
PLXNA3-206ENST00000491066 UNC5CLQ8IV45 518 aa27.94■■■□□ 2.06
PLXNA3-206ENST00000491066 RGL3Q3MIN7 710 aa27.93■■■□□ 2.06
PLXNA3-206ENST00000491066 ANKRD30BQ9BXX2 1392 aa27.93■■■□□ 2.06
PLXNA3-206ENST00000491066 SPATA31A3Q5VYP0 1347 aa27.92■■■□□ 2.06
PLXNA3-206ENST00000491066 CCDC144AA2RUR9 1427 aa27.91■■■□□ 2.06
PLXNA3-206ENST00000491066 TMEM132EQ6IEE7 984 aa27.9■■■□□ 2.06
PLXNA3-206ENST00000491066 SLIT2O94813 1529 aa27.9■■■□□ 2.06
PLXNA3-206ENST00000491066 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
PLXNA3-206ENST00000491066 PLEKHH1Q9ULM0 1364 aa27.89■■■□□ 2.06
PLXNA3-206ENST00000491066 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.05
PLXNA3-206ENST00000491066 KRT28Q7Z3Y7 464 aa27.88■■■□□ 2.05
PLXNA3-206ENST00000491066 RALGAPBQ86X10 1494 aa27.88■■■□□ 2.05
PLXNA3-206ENST00000491066 SIRT1Q96EB6 747 aa27.87■■■□□ 2.05
PLXNA3-206ENST00000491066 BLMP54132 1417 aaPredicted RBP27.85■■■□□ 2.05
PLXNA3-206ENST00000491066 GLI3P10071 1580 aa27.85■■■□□ 2.05
PLXNA3-206ENST00000491066 KNDC1Q76NI1 1749 aa27.84■■■□□ 2.05
PLXNA3-206ENST00000491066 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
PLXNA3-206ENST00000491066 PIK3C2GO75747 1445 aa27.84■■■□□ 2.05
PLXNA3-206ENST00000491066 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
PLXNA3-206ENST00000491066 KIF1AQ12756 1690 aa27.82■■■□□ 2.04
PLXNA3-206ENST00000491066 PSME1Q06323 249 aa27.82■■■□□ 2.04
PLXNA3-206ENST00000491066 MPHOSPH9Q99550 1183 aa27.82■■■□□ 2.04
PLXNA3-206ENST00000491066 IFT172Q9UG01 1749 aa27.81■■■□□ 2.04
PLXNA3-206ENST00000491066 VPS72Q15906 364 aa27.8■■■□□ 2.04
PLXNA3-206ENST00000491066 PHF8Q9UPP1 1060 aa27.8■■■□□ 2.04
PLXNA3-206ENST00000491066 USP32Q8NFA0 1604 aa27.79■■■□□ 2.04
PLXNA3-206ENST00000491066 ONECUT3O60422 494 aaPredicted RBP27.79■■■□□ 2.04
PLXNA3-206ENST00000491066 SEPT12Q8IYM1 358 aa27.79■■■□□ 2.04
PLXNA3-206ENST00000491066 HAP1P54257 671 aaPredicted RBP27.78■■■□□ 2.04
PLXNA3-206ENST00000491066 C14orf93Q9H972 538 aaKnown RBP27.78■■■□□ 2.04
PLXNA3-206ENST00000491066 TNS3Q68CZ2 1445 aa27.77■■■□□ 2.04
PLXNA3-206ENST00000491066 SF3B2Q13435 895 aaKnown RBP27.76■■■□□ 2.03
PLXNA3-206ENST00000491066 DEFB132Q7Z7B7 95 aa27.76■■■□□ 2.03
PLXNA3-206ENST00000491066 CABLES1Q8TDN4 633 aa27.76■■■□□ 2.03
PLXNA3-206ENST00000491066 SBNO1A3KN83 1393 aa27.75■■■□□ 2.03
PLXNA3-206ENST00000491066 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
PLXNA3-206ENST00000491066 BRWD3Q6RI45 1802 aa27.72■■■□□ 2.03
PLXNA3-206ENST00000491066 NRXN1Q9ULB1 1477 aa27.71■■■□□ 2.03
PLXNA3-206ENST00000491066 ARHGEF10O15013 1369 aa27.71■■■□□ 2.03
PLXNA3-206ENST00000491066 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.02
PLXNA3-206ENST00000491066 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
PLXNA3-206ENST00000491066 CCDC9Q9Y3X0 531 aaKnown RBP27.7■■■□□ 2.02
PLXNA3-206ENST00000491066 RGPD8O14715 1765 aaPredicted RBP27.69■■■□□ 2.02
PLXNA3-206ENST00000491066 NWD2Q9ULI1 1742 aa27.69■■■□□ 2.02
PLXNA3-206ENST00000491066 FAM83GA6ND36 823 aa27.68■■■□□ 2.02
PLXNA3-206ENST00000491066 LMOD2Q6P5Q4 547 aa27.68■■■□□ 2.02
PLXNA3-206ENST00000491066 PRAM1Q96QH2 718 aa27.68■■■□□ 2.02
PLXNA3-206ENST00000491066 PLEKHG5O94827 1062 aa27.67■■■□□ 2.02
PLXNA3-206ENST00000491066 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
PLXNA3-206ENST00000491066 SAFB2Q14151 953 aaKnown RBP eCLIP27.64■■■□□ 2.02
PLXNA3-206ENST00000491066 ACIN1Q9UKV3 1341 aaKnown RBP27.64■■■□□ 2.01
PLXNA3-206ENST00000491066 PMFBP1Q8TBY8 1022 aa27.63■■■□□ 2.01
PLXNA3-206ENST00000491066 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
PLXNA3-206ENST00000491066 POGKQ9P215 609 aa27.62■■■□□ 2.01
PLXNA3-206ENST00000491066 ABCA3Q99758 1704 aa27.6■■■□□ 2.01
PLXNA3-206ENST00000491066 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
PLXNA3-206ENST00000491066 BAG6P46379 1132 aa27.59■■■□□ 2.01
PLXNA3-206ENST00000491066 BTG4Q9NY30 223 aa27.58■■■□□ 2.01
PLXNA3-206ENST00000491066 A0A0G2JS52 829 aa27.57■■■□□ 2
PLXNA3-206ENST00000491066 MYT1Q01538 1121 aa27.57■■■□□ 2
PLXNA3-206ENST00000491066 FAM98CQ17RN3 349 aaKnown RBP27.57■■■□□ 2
PLXNA3-206ENST00000491066 LRP5O75197 1615 aa27.56■■■□□ 2
PLXNA3-206ENST00000491066 ADGRB2O60241 1585 aa27.54■■■□□ 2
PLXNA3-206ENST00000491066 GPRASP1Q5JY77 1395 aa27.54■■■□□ 2
PLXNA3-206ENST00000491066 NRAPQ86VF7 1730 aa27.53■■■□□ 2
PLXNA3-206ENST00000491066 TRPM3Q9HCF6 1732 aaPredicted RBP27.52■■■□□ 2
PLXNA3-206ENST00000491066 PSDA5PKW4 1024 aaPredicted RBP27.51■■□□□ 1.99
PLXNA3-206ENST00000491066 HRCP23327 699 aa27.51■■□□□ 1.99
PLXNA3-206ENST00000491066 TRAK1Q9UPV9 953 aa27.51■■□□□ 1.99
PLXNA3-206ENST00000491066 EIF3AQ14152 1382 aaKnown RBP27.5■■□□□ 1.99
PLXNA3-206ENST00000491066 SPATA31A5Q5VU36 1347 aa27.5■■□□□ 1.99
PLXNA3-206ENST00000491066 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
PLXNA3-206ENST00000491066 HIRIP3Q9BW71 556 aaPredicted RBP27.5■■□□□ 1.99
PLXNA3-206ENST00000491066 PRR36Q9H6K5 1346 aa27.49■■□□□ 1.99
PLXNA3-206ENST00000491066 ADGRB1O14514 1584 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms