RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
CRNKL1-204ENST00000490910 SNX21Q969T3 373 aa13.71□□□□□ -0.21
CRNKL1-204ENST00000490910 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.21
CRNKL1-204ENST00000490910 NEK4P51957 841 aa13.71□□□□□ -0.22
CRNKL1-204ENST00000490910 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.22
CRNKL1-204ENST00000490910 SMC5Q8IY18 1101 aa13.71□□□□□ -0.22
CRNKL1-204ENST00000490910 NOL7Q9UMY1 257 aaKnown RBP13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
CRNKL1-204ENST00000490910 RIPK4P57078 832 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 KANK1Q14678 1352 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 FGD1P98174 961 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 ABCC5O15440 1437 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
CRNKL1-204ENST00000490910 MCM2P49736 904 aa13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 MTHFSP49914 203 aa13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 ANTXR1Q9H6X2 564 aa13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
CRNKL1-204ENST00000490910 GPS2Q13227 327 aa13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 TPD52L1Q16890 204 aaPredicted RBP13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 KIF20AO95235 890 aa13.67□□□□□ -0.22
CRNKL1-204ENST00000490910 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 TRAK1Q9UPV9 953 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 HECW1Q76N89 1606 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 BECN2A8MW95 431 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 PER1O15534 1290 aaPredicted RBP13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
CRNKL1-204ENST00000490910 GAS2L3Q86XJ1 694 aa13.65□□□□□ -0.22
CRNKL1-204ENST00000490910 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
CRNKL1-204ENST00000490910 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
CRNKL1-204ENST00000490910 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
CRNKL1-204ENST00000490910 ZMYM4Q5VZL5 1548 aa13.65□□□□□ -0.22
CRNKL1-204ENST00000490910 BMP2KLQ5H9B9 411 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
CRNKL1-204ENST00000490910 ERICH4A6NGS2 130 aa13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 INSRP06213 1382 aa13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
CRNKL1-204ENST00000490910 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 FIBPO43427 364 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 TPM4P67936 248 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 LMOD3Q0VAK6 560 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 UGGT2Q9NYU1 1516 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
CRNKL1-204ENST00000490910 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 RLBP1P12271 317 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 ERC2O15083 957 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
CRNKL1-204ENST00000490910 CCDC192P0DO97 292 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 TRIM27P14373 513 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 ZNF445P59923 1031 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 IGSF3O75054 1194 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 NPHP1O15259 732 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
CRNKL1-204ENST00000490910 ADCY5O95622 1261 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms