RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 PLSCR2Q9NRY7 297 aa6.47□□□□□ -1.37
SFPQ-210ENST00000490668 RNF17Q9BXT8 1623 aaKnown RBP6.47□□□□□ -1.37
SFPQ-210ENST00000490668 DHX29Q7Z478 1369 aaKnown RBP6.46□□□□□ -1.37
SFPQ-210ENST00000490668 PRDM15P57071 1507 aaPredicted RBP6.46□□□□□ -1.37
SFPQ-210ENST00000490668 ZC3H13Q5T200 1668 aaKnown RBP6.46□□□□□ -1.37
SFPQ-210ENST00000490668 RIMS1Q86UR5 1692 aaKnown RBP6.46□□□□□ -1.37
SFPQ-210ENST00000490668 GCC2Q8IWJ2 1684 aa6.46□□□□□ -1.37
SFPQ-210ENST00000490668 IRF6O14896 467 aa6.46□□□□□ -1.38
SFPQ-210ENST00000490668 CACNB1Q02641 598 aaPredicted RBP6.46□□□□□ -1.38
SFPQ-210ENST00000490668 PCMTD1Q96MG8 357 aaPredicted RBP6.46□□□□□ -1.38
SFPQ-210ENST00000490668 CNTLNQ9NXG0 1405 aa6.46□□□□□ -1.38
SFPQ-210ENST00000490668 PTPRKQ15262 1439 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 NCOA1Q15788 1441 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 ANKRD50Q9ULJ7 1429 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 E9PSI1 815 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 ITGAEP38570 1179 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 MLECQ14165 292 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 ESF1Q9H501 851 aaKnown RBP6.45□□□□□ -1.38
SFPQ-210ENST00000490668 CHIC2Q9UKJ5 165 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 DEPDC5O75140 1603 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 MROH2AA6NES4 1674 aa6.45□□□□□ -1.38
SFPQ-210ENST00000490668 MROH1Q8NDA8 1641 aa6.44□□□□□ -1.38
SFPQ-210ENST00000490668 SOX12O15370 315 aa6.44□□□□□ -1.38
SFPQ-210ENST00000490668 RRP7BPQ9NSQ0 103 aa6.44□□□□□ -1.38
SFPQ-210ENST00000490668 PTPRMP28827 1452 aa6.44□□□□□ -1.38
SFPQ-210ENST00000490668 UNC13BO14795 1591 aa6.44□□□□□ -1.38
SFPQ-210ENST00000490668 HFM1A2PYH4 1435 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 CLTCQ00610 1675 aaKnown RBP6.43□□□□□ -1.38
SFPQ-210ENST00000490668 KIF3BO15066 747 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 MS4A1P11836 297 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 GGT6Q6P531 493 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 SPDYE1Q8NFV5 336 aaPredicted RBP6.43□□□□□ -1.38
SFPQ-210ENST00000490668 OXER1Q8TDS5 423 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 FBXW7Q969H0 707 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 MS4A4AQ96JQ5 239 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 PUS7Q96PZ0 661 aaKnown RBP6.43□□□□□ -1.38
SFPQ-210ENST00000490668 KANK1Q14678 1352 aa6.43□□□□□ -1.38
SFPQ-210ENST00000490668 ABCC3O15438 1527 aa6.42□□□□□ -1.38
SFPQ-210ENST00000490668 HSP90B1P14625 803 aaKnown RBP6.42□□□□□ -1.38
SFPQ-210ENST00000490668 PDIA6Q15084 440 aa6.42□□□□□ -1.38
SFPQ-210ENST00000490668 CAMSAP1Q5T5Y3 1602 aa6.42□□□□□ -1.38
SFPQ-210ENST00000490668 KDM4FA0A1W2PPD8 638 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 DPYSL4O14531 572 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 PRR29P0C7W0 189 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 SH3D19Q5HYK7 790 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 ZNF579Q8NAF0 562 aaKnown RBP6.41□□□□□ -1.38
SFPQ-210ENST00000490668 COG6Q9Y2V7 657 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 C3P01024 1663 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 CEP152O94986 1710 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 NAIPQ13075 1403 aa6.41□□□□□ -1.38
SFPQ-210ENST00000490668 LMTK2Q8IWU2 1503 aa6.4□□□□□ -1.38
SFPQ-210ENST00000490668 VWDEQ8N2E2 1590 aa6.4□□□□□ -1.38
SFPQ-210ENST00000490668 IQGAP3Q86VI3 1631 aa6.4□□□□□ -1.38
SFPQ-210ENST00000490668 HMGB1P09429 215 aaKnown RBP6.4□□□□□ -1.38
SFPQ-210ENST00000490668 CDK11BP21127 795 aaKnown RBP6.4□□□□□ -1.38
SFPQ-210ENST00000490668 GIGYF2Q6Y7W6 1299 aaKnown RBP6.4□□□□□ -1.38
SFPQ-210ENST00000490668 REPIN1Q9BWE0 567 aaKnown RBP6.4□□□□□ -1.38
SFPQ-210ENST00000490668 CABP2Q9NPB3 220 aa6.4□□□□□ -1.38
SFPQ-210ENST00000490668 EMILIN3Q9NT22 766 aa6.4□□□□□ -1.38
SFPQ-210ENST00000490668 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.39
SFPQ-210ENST00000490668 NPATQ14207 1427 aa6.4□□□□□ -1.39
SFPQ-210ENST00000490668 PZPP20742 1482 aa6.4□□□□□ -1.39
SFPQ-210ENST00000490668 EFCAB6Q5THR3 1501 aa6.4□□□□□ -1.39
SFPQ-210ENST00000490668 TET3O43151 1660 aa6.39□□□□□ -1.39
SFPQ-210ENST00000490668 SPDYE16A6NNV3 312 aaPredicted RBP6.39□□□□□ -1.39
SFPQ-210ENST00000490668 PPP1R15AO75807 674 aaPredicted RBP6.39□□□□□ -1.39
SFPQ-210ENST00000490668 FECHP22830 423 aa6.39□□□□□ -1.39
SFPQ-210ENST00000490668 MYT1Q01538 1121 aa6.39□□□□□ -1.39
SFPQ-210ENST00000490668 MYO3AQ8NEV4 1616 aa6.39□□□□□ -1.39
SFPQ-210ENST00000490668 PREX1Q8TCU6 1659 aa6.39□□□□□ -1.39
SFPQ-210ENST00000490668 TTLL12Q14166 644 aaPredicted RBP6.38□□□□□ -1.39
SFPQ-210ENST00000490668 TSPYL2Q9H2G4 693 aaPredicted RBP6.38□□□□□ -1.39
SFPQ-210ENST00000490668 ZMYM3Q14202 1370 aa6.38□□□□□ -1.39
SFPQ-210ENST00000490668 UHRF1BP1Q6BDS2 1440 aa6.38□□□□□ -1.39
SFPQ-210ENST00000490668 RPRD2Q5VT52 1461 aaKnown RBP6.38□□□□□ -1.39
SFPQ-210ENST00000490668 ZNF142P52746 1687 aaPredicted RBP6.37□□□□□ -1.39
SFPQ-210ENST00000490668 SPATA31D1Q6ZQQ2 1576 aa6.37□□□□□ -1.39
SFPQ-210ENST00000490668 ERVK-7P63135 1459 aa6.37□□□□□ -1.39
SFPQ-210ENST00000490668 ARHGAP31Q2M1Z3 1444 aa6.37□□□□□ -1.39
SFPQ-210ENST00000490668 ACIN1Q9UKV3 1341 aaKnown RBP6.37□□□□□ -1.39
SFPQ-210ENST00000490668 GNPATO15228 680 aa6.37□□□□□ -1.39
SFPQ-210ENST00000490668 EIF5BO60841 1220 aaKnown RBP6.37□□□□□ -1.39
SFPQ-210ENST00000490668 PPP1R15BQ5SWA1 713 aa6.37□□□□□ -1.39
SFPQ-210ENST00000490668 SETD5Q9C0A6 1442 aa6.36□□□□□ -1.39
SFPQ-210ENST00000490668 NUP155O75694 1391 aa6.36□□□□□ -1.39
SFPQ-210ENST00000490668 TNRQ92752 1358 aa6.36□□□□□ -1.39
SFPQ-210ENST00000490668 CLEC11AQ9Y240 323 aa6.36□□□□□ -1.39
SFPQ-210ENST00000490668 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
SFPQ-210ENST00000490668 CEP170BQ9Y4F5 1589 aaPredicted RBP6.35□□□□□ -1.39
SFPQ-210ENST00000490668 LMTK3Q96Q04 1460 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 NLRP1Q9C000 1473 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 RAB3GAP2Q9H2M9 1393 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 NUTM2FA1L443 756 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 SPDYE5A6NIY4 337 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 KCNA1Q09470 495 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 SKIV2LQ15477 1246 aaKnown RBP6.35□□□□□ -1.39
SFPQ-210ENST00000490668 PROCA1Q8NCQ7 364 aaPredicted RBP6.35□□□□□ -1.39
SFPQ-210ENST00000490668 ZNF330Q9Y3S2 320 aaPredicted RBP6.35□□□□□ -1.39
SFPQ-210ENST00000490668 E9PCH4 1651 aa6.35□□□□□ -1.39
SFPQ-210ENST00000490668 PATL2C9JE40 543 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms