RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MMP16P51512 607 aa9.56□□□□□ -0.88
HMGN1-218ENST00000490032 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
HMGN1-218ENST00000490032 FDX1P10109 184 aa9.55□□□□□ -0.88
HMGN1-218ENST00000490032 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
HMGN1-218ENST00000490032 FCF1Q9Y324 198 aaKnown RBP9.55□□□□□ -0.88
HMGN1-218ENST00000490032 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
HMGN1-218ENST00000490032 DIXDC1Q155Q3 683 aa9.54□□□□□ -0.88
HMGN1-218ENST00000490032 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
HMGN1-218ENST00000490032 GFRA3O60609 400 aa9.53□□□□□ -0.88
HMGN1-218ENST00000490032 DXOO77932 396 aaKnown RBP9.53□□□□□ -0.88
HMGN1-218ENST00000490032 GJA5P36382 358 aa9.53□□□□□ -0.88
HMGN1-218ENST00000490032 NDUFV2P19404 249 aa9.52□□□□□ -0.89
HMGN1-218ENST00000490032 RPIAP49247 311 aa9.52□□□□□ -0.89
HMGN1-218ENST00000490032 RETREG3Q86VR2 466 aa9.52□□□□□ -0.89
HMGN1-218ENST00000490032 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
HMGN1-218ENST00000490032 TBC1D2Q9BYX2 928 aa9.52□□□□□ -0.89
HMGN1-218ENST00000490032 NRG2O14511 850 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-218ENST00000490032 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
HMGN1-218ENST00000490032 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
HMGN1-218ENST00000490032 RSBN1LQ6PCB5 846 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-218ENST00000490032 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
HMGN1-218ENST00000490032 SPTLC1O15269 473 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 JUNDP17535 347 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 PRR20EP86478 221 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 PRR20CP86479 221 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 PRR20DP86480 221 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 PRR20BP86481 221 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 PRR20AP86496 221 aa9.48□□□□□ -0.89
HMGN1-218ENST00000490032 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
HMGN1-218ENST00000490032 GDF9O60383 454 aa9.47□□□□□ -0.89
HMGN1-218ENST00000490032 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
HMGN1-218ENST00000490032 Q6ZNB5 142 aa9.46□□□□□ -0.9
HMGN1-218ENST00000490032 CD2BP2O95400 341 aaKnown RBP9.45□□□□□ -0.9
HMGN1-218ENST00000490032 MTMR2Q13614 643 aa9.45□□□□□ -0.9
HMGN1-218ENST00000490032 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-218ENST00000490032 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
HMGN1-218ENST00000490032 RIC3Q7Z5B4 369 aa9.44□□□□□ -0.9
HMGN1-218ENST00000490032 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
HMGN1-218ENST00000490032 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
HMGN1-218ENST00000490032 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
HMGN1-218ENST00000490032 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
HMGN1-218ENST00000490032 LCE2BO14633 110 aa9.42□□□□□ -0.9
HMGN1-218ENST00000490032 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
HMGN1-218ENST00000490032 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
HMGN1-218ENST00000490032 TRIM32Q13049 653 aa9.41□□□□□ -0.9
HMGN1-218ENST00000490032 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
HMGN1-218ENST00000490032 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
HMGN1-218ENST00000490032 TNFRSF10AO00220 468 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 HRCP23327 699 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 PTPRNQ16849 979 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 CCDC24Q8N4L8 307 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 ZBTB3Q9H5J0 574 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-218ENST00000490032 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.9
HMGN1-218ENST00000490032 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
HMGN1-218ENST00000490032 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
HMGN1-218ENST00000490032 CCNYL3P0C7X3 344 aa9.38□□□□□ -0.91
HMGN1-218ENST00000490032 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
HMGN1-218ENST00000490032 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
HMGN1-218ENST00000490032 FOXC1Q12948 553 aa9.37□□□□□ -0.91
HMGN1-218ENST00000490032 PTCRAQ6ISU1 281 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-218ENST00000490032 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
HMGN1-218ENST00000490032 WNT7AO00755 349 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 LILRB3O75022 631 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 DGAT1O75907 488 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 DDRGK1Q96HY6 314 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 TOR4AQ9NXH8 423 aa9.36□□□□□ -0.91
HMGN1-218ENST00000490032 WNT7BP56706 349 aa9.35□□□□□ -0.91
HMGN1-218ENST00000490032 QPCTQ16769 361 aa9.35□□□□□ -0.91
HMGN1-218ENST00000490032 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
HMGN1-218ENST00000490032 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
HMGN1-218ENST00000490032 FAM117AQ9C073 453 aa9.35□□□□□ -0.91
HMGN1-218ENST00000490032 SKOR1P84550 965 aa9.34□□□□□ -0.91
HMGN1-218ENST00000490032 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
HMGN1-218ENST00000490032 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
HMGN1-218ENST00000490032 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
HMGN1-218ENST00000490032 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
HMGN1-218ENST00000490032 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
HMGN1-218ENST00000490032 SKIV2LQ15477 1246 aaKnown RBP9.32□□□□□ -0.92
HMGN1-218ENST00000490032 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
HMGN1-218ENST00000490032 CYP4X1Q8N118 509 aa9.31□□□□□ -0.92
HMGN1-218ENST00000490032 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
HMGN1-218ENST00000490032 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
HMGN1-218ENST00000490032 NUTM2BA6NNL0 878 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 NUTM2EB1AL46 878 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 MYT1Q01538 1121 aa9.3□□□□□ -0.92
HMGN1-218ENST00000490032 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 NUTM2AQ8IVF1 878 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-218ENST00000490032 SNIP1Q8TAD8 396 aaKnown RBP9.29□□□□□ -0.92
HMGN1-218ENST00000490032 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-218ENST00000490032 AVPP01185 164 aa9.28□□□□□ -0.92
HMGN1-218ENST00000490032 SH3BP2P78314 561 aa9.28□□□□□ -0.92
HMGN1-218ENST00000490032 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGN1-218ENST00000490032 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
HMGN1-218ENST00000490032 TTC24A2A3L6 582 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-218ENST00000490032 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms