RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
CLIC4-203ENST00000489758 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
CLIC4-203ENST00000489758 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
CLIC4-203ENST00000489758 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.72■■□□□ 1.23
CLIC4-203ENST00000489758 ST20-MTHFSA0A0A6YYL1 179 aa22.72■■□□□ 1.23
CLIC4-203ENST00000489758 EIF4G2P78344 907 aaKnown RBP eCLIP22.71■■□□□ 1.23
CLIC4-203ENST00000489758 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.22
CLIC4-203ENST00000489758 TESK2Q96S53 571 aa22.7■■□□□ 1.22
CLIC4-203ENST00000489758 SBNO2Q9Y2G9 1366 aa22.7■■□□□ 1.22
CLIC4-203ENST00000489758 XIRP1Q702N8 1843 aaKnown RBP22.69■■□□□ 1.22
CLIC4-203ENST00000489758 MINK1Q8N4C8 1332 aaPredicted RBP22.69■■□□□ 1.22
CLIC4-203ENST00000489758 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
CLIC4-203ENST00000489758 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
CLIC4-203ENST00000489758 C19orf44Q9H6X5 657 aa22.68■■□□□ 1.22
CLIC4-203ENST00000489758 C14orf37Q86TY3 774 aa22.67■■□□□ 1.22
CLIC4-203ENST00000489758 QRICH2Q9H0J4 1663 aa22.67■■□□□ 1.22
CLIC4-203ENST00000489758 HIRIP3Q9BW71 556 aaPredicted RBP22.66■■□□□ 1.22
CLIC4-203ENST00000489758 DCCP43146 1447 aa22.65■■□□□ 1.22
CLIC4-203ENST00000489758 MSH6P52701 1360 aa22.65■■□□□ 1.22
CLIC4-203ENST00000489758 CDC42BPGQ6DT37 1551 aa22.65■■□□□ 1.22
CLIC4-203ENST00000489758 TULP4Q9NRJ4 1543 aa22.63■■□□□ 1.21
CLIC4-203ENST00000489758 WASLO00401 505 aaPredicted RBP22.62■■□□□ 1.21
CLIC4-203ENST00000489758 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
CLIC4-203ENST00000489758 ATF3P18847 181 aa22.59■■□□□ 1.21
CLIC4-203ENST00000489758 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
CLIC4-203ENST00000489758 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
CLIC4-203ENST00000489758 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
CLIC4-203ENST00000489758 MST1RQ04912 1400 aa22.57■■□□□ 1.2
CLIC4-203ENST00000489758 ILDR2Q71H61 639 aa22.57■■□□□ 1.2
CLIC4-203ENST00000489758 SLC24A1O60721 1099 aa22.56■■□□□ 1.2
CLIC4-203ENST00000489758 TOM1O60784 492 aa22.56■■□□□ 1.2
CLIC4-203ENST00000489758 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
CLIC4-203ENST00000489758 FMN2Q9NZ56 1722 aa22.55■■□□□ 1.2
CLIC4-203ENST00000489758 TMF1P82094 1093 aa22.55■■□□□ 1.2
CLIC4-203ENST00000489758 ANKARQ7Z5J8 1434 aa22.55■■□□□ 1.2
CLIC4-203ENST00000489758 PRR36Q9H6K5 1346 aa22.55■■□□□ 1.2
CLIC4-203ENST00000489758 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
CLIC4-203ENST00000489758 ATP7BP35670 1465 aa22.54■■□□□ 1.2
CLIC4-203ENST00000489758 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
CLIC4-203ENST00000489758 C11orf95C9JLR9 678 aaPredicted RBP22.53■■□□□ 1.2
CLIC4-203ENST00000489758 NUTM2FA1L443 756 aa22.52■■□□□ 1.2
CLIC4-203ENST00000489758 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
CLIC4-203ENST00000489758 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
CLIC4-203ENST00000489758 USP32Q8NFA0 1604 aa22.52■■□□□ 1.2
CLIC4-203ENST00000489758 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
CLIC4-203ENST00000489758 PUS7Q96PZ0 661 aaKnown RBP22.51■■□□□ 1.19
CLIC4-203ENST00000489758 ATAD2Q6PL18 1390 aa22.47■■□□□ 1.19
CLIC4-203ENST00000489758 HSPA1LP34931 641 aa22.46■■□□□ 1.19
CLIC4-203ENST00000489758 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
CLIC4-203ENST00000489758 ORAI2Q96SN7 254 aa22.46■■□□□ 1.19
CLIC4-203ENST00000489758 CCDC61Q9Y6R9 512 aa22.46■■□□□ 1.19
CLIC4-203ENST00000489758 SOCS7O14512 581 aa22.45■■□□□ 1.18
CLIC4-203ENST00000489758 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
CLIC4-203ENST00000489758 KIF7Q2M1P5 1343 aa22.45■■□□□ 1.18
CLIC4-203ENST00000489758 ESCO1Q5FWF5 840 aa22.44■■□□□ 1.18
CLIC4-203ENST00000489758 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
CLIC4-203ENST00000489758 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
CLIC4-203ENST00000489758 WASHC2AQ641Q2 1341 aa22.43■■□□□ 1.18
CLIC4-203ENST00000489758 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
CLIC4-203ENST00000489758 CCDC7Q96M83 1385 aa22.41■■□□□ 1.18
CLIC4-203ENST00000489758 CABP1Q9NZU7 370 aa22.41■■□□□ 1.18
CLIC4-203ENST00000489758 PHF8Q9UPP1 1060 aa22.41■■□□□ 1.18
CLIC4-203ENST00000489758 PMFBP1Q8TBY8 1022 aa22.39■■□□□ 1.17
CLIC4-203ENST00000489758 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
CLIC4-203ENST00000489758 NINLQ9Y2I6 1382 aa22.38■■□□□ 1.17
CLIC4-203ENST00000489758 SLC12A5Q9H2X9 1139 aa22.38■■□□□ 1.17
CLIC4-203ENST00000489758 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
CLIC4-203ENST00000489758 ACEP12821 1306 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 CD163L1Q9NR16 1453 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 RGPD8O14715 1765 aaPredicted RBP22.36■■□□□ 1.17
CLIC4-203ENST00000489758 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
CLIC4-203ENST00000489758 CPSF1Q10570 1443 aaKnown RBP22.35■■□□□ 1.17
CLIC4-203ENST00000489758 FOXO3O43524 673 aa22.35■■□□□ 1.17
CLIC4-203ENST00000489758 MYOM1P52179 1685 aa22.35■■□□□ 1.17
CLIC4-203ENST00000489758 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
CLIC4-203ENST00000489758 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
CLIC4-203ENST00000489758 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
CLIC4-203ENST00000489758 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
CLIC4-203ENST00000489758 AHDC1Q5TGY3 1603 aaPredicted RBP22.31■■□□□ 1.16
CLIC4-203ENST00000489758 PXDNQ92626 1479 aa22.31■■□□□ 1.16
CLIC4-203ENST00000489758 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
CLIC4-203ENST00000489758 ANKRD36BQ8N2N9 1353 aa22.31■■□□□ 1.16
CLIC4-203ENST00000489758 MED1Q15648 1581 aaPredicted RBP22.3■■□□□ 1.16
CLIC4-203ENST00000489758 NHSL1Q5SYE7 1610 aa22.29■■□□□ 1.16
CLIC4-203ENST00000489758 TERF2IPQ9NYB0 399 aa22.29■■□□□ 1.16
CLIC4-203ENST00000489758 USP6P35125 1406 aa22.29■■□□□ 1.16
CLIC4-203ENST00000489758 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
CLIC4-203ENST00000489758 XPCQ01831 940 aaPredicted RBP22.28■■□□□ 1.16
CLIC4-203ENST00000489758 ZNF692Q9BU19 519 aaPredicted RBP22.28■■□□□ 1.16
CLIC4-203ENST00000489758 SSH2Q76I76 1423 aa22.28■■□□□ 1.16
CLIC4-203ENST00000489758 PSME1Q06323 249 aa22.27■■□□□ 1.16
CLIC4-203ENST00000489758 KRT28Q7Z3Y7 464 aa22.27■■□□□ 1.16
CLIC4-203ENST00000489758 HDGFL2Q7Z4V5 671 aaPredicted RBP22.27■■□□□ 1.16
CLIC4-203ENST00000489758 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
CLIC4-203ENST00000489758 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
CLIC4-203ENST00000489758 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
CLIC4-203ENST00000489758 PANK3Q9H999 370 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms