RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TYW1BQ6NUM6 668 aa14.04□□□□□ -0.16
TNRC6B-208ENST00000489500 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
TNRC6B-208ENST00000489500 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
TNRC6B-208ENST00000489500 ABCC1P33527 1531 aa14.04□□□□□ -0.16
TNRC6B-208ENST00000489500 BHMG1C9JSJ3 638 aaPredicted RBP14.03□□□□□ -0.16
TNRC6B-208ENST00000489500 HCSTQ9UBK5 93 aa14.03□□□□□ -0.16
TNRC6B-208ENST00000489500 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
TNRC6B-208ENST00000489500 COL9A1P20849 921 aa14.02□□□□□ -0.17
TNRC6B-208ENST00000489500 CFDP1Q9UEE9 299 aaPredicted RBP14.02□□□□□ -0.17
TNRC6B-208ENST00000489500 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
TNRC6B-208ENST00000489500 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
TNRC6B-208ENST00000489500 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 CEP162Q5TB80 1403 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 DDX12PQ92771 950 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 FBXW7Q969H0 707 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
TNRC6B-208ENST00000489500 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
TNRC6B-208ENST00000489500 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
TNRC6B-208ENST00000489500 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
TNRC6B-208ENST00000489500 SPAG9O60271 1321 aaKnown RBP13.98□□□□□ -0.17
TNRC6B-208ENST00000489500 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
TNRC6B-208ENST00000489500 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 KIDINS220Q9ULH0 1771 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 E2F4Q16254 413 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 PROX2Q3B8N5 592 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
TNRC6B-208ENST00000489500 SAMD9LQ8IVG5 1584 aa13.96□□□□□ -0.17
TNRC6B-208ENST00000489500 AGLP35573 1532 aa13.96□□□□□ -0.17
TNRC6B-208ENST00000489500 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■□ 21.1
TNRC6B-208ENST00000489500 EPAS1Q99814 870 aa13.96□□□□□ -0.17
TNRC6B-208ENST00000489500 SUPT6HQ7KZ85 1726 aaKnown RBP13.95□□□□□ -0.18
TNRC6B-208ENST00000489500 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
TNRC6B-208ENST00000489500 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
TNRC6B-208ENST00000489500 PDIA6Q15084 440 aa13.94□□□□□ -0.18
TNRC6B-208ENST00000489500 C6orf132Q5T0Z8 1188 aa13.94□□□□□ -0.18
TNRC6B-208ENST00000489500 WDR70Q9NW82 654 aa13.94□□□□□ -0.18
TNRC6B-208ENST00000489500 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
TNRC6B-208ENST00000489500 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
TNRC6B-208ENST00000489500 ATP7AQ04656 1500 aa13.92□□□□□ -0.18
TNRC6B-208ENST00000489500 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
TNRC6B-208ENST00000489500 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
TNRC6B-208ENST00000489500 UHRF1BP1Q6BDS2 1440 aa13.91□□□□□ -0.18
TNRC6B-208ENST00000489500 PTPN5P54829 565 aa13.91□□□□□ -0.18
TNRC6B-208ENST00000489500 PLA2G2EQ9NZK7 142 aa13.91□□□□□ -0.18
TNRC6B-208ENST00000489500 TIAM1Q13009 1591 aa13.91□□□□□ -0.18
TNRC6B-208ENST00000489500 CEBPAP49715 358 aaPredicted RBP13.9□□□□□ -0.18
TNRC6B-208ENST00000489500 HSPA2P54652 639 aa13.9□□□□□ -0.18
TNRC6B-208ENST00000489500 C3P01024 1663 aa13.9□□□□□ -0.18
TNRC6B-208ENST00000489500 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
TNRC6B-208ENST00000489500 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
TNRC6B-208ENST00000489500 NBR1Q14596 966 aa13.89□□□□□ -0.19
TNRC6B-208ENST00000489500 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
TNRC6B-208ENST00000489500 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
TNRC6B-208ENST00000489500 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 A2MP01023 1474 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 WNT2BQ93097 391 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
TNRC6B-208ENST00000489500 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
TNRC6B-208ENST00000489500 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
TNRC6B-208ENST00000489500 KIAA1468Q9P260 1216 aa13.86□□□□□ -0.19
TNRC6B-208ENST00000489500 RTEL1-TNFRSF6BF6WH68 1400 aa13.86□□□□□ -0.19
TNRC6B-208ENST00000489500 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
TNRC6B-208ENST00000489500 TSPY4P0CV99 314 aa13.85□□□□□ -0.19
TNRC6B-208ENST00000489500 TSPY10P0CW01 314 aa13.85□□□□□ -0.19
TNRC6B-208ENST00000489500 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
TNRC6B-208ENST00000489500 TSR1Q2NL82 804 aaKnown RBP13.85□□□□□ -0.19
TNRC6B-208ENST00000489500 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
TNRC6B-208ENST00000489500 GGT6Q6P531 493 aa13.84□□□□□ -0.19
TNRC6B-208ENST00000489500 CLTCQ00610 1675 aaKnown RBP13.83□□□□□ -0.2
TNRC6B-208ENST00000489500 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
TNRC6B-208ENST00000489500 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
TNRC6B-208ENST00000489500 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
TNRC6B-208ENST00000489500 ZMYM3Q14202 1370 aa13.83□□□□□ -0.2
TNRC6B-208ENST00000489500 NPATQ14207 1427 aa13.82□□□□□ -0.2
TNRC6B-208ENST00000489500 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
TNRC6B-208ENST00000489500 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
TNRC6B-208ENST00000489500 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
TNRC6B-208ENST00000489500 MAP3K7O43318 606 aa13.82□□□□□ -0.2
TNRC6B-208ENST00000489500 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
TNRC6B-208ENST00000489500 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
TNRC6B-208ENST00000489500 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
TNRC6B-208ENST00000489500 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
TNRC6B-208ENST00000489500 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
TNRC6B-208ENST00000489500 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
TNRC6B-208ENST00000489500 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
TNRC6B-208ENST00000489500 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
TNRC6B-208ENST00000489500 KIF3BO15066 747 aa13.77□□□□□ -0.21
TNRC6B-208ENST00000489500 CERKQ8TCT0 537 aa13.77□□□□□ -0.21
TNRC6B-208ENST00000489500 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
TNRC6B-208ENST00000489500 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
TNRC6B-208ENST00000489500 PTPRTO14522 1441 aa13.75□□□□□ -0.21
TNRC6B-208ENST00000489500 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
TNRC6B-208ENST00000489500 ANKK1Q8NFD2 765 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms