RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LRRC59Q96AG4 307 aaKnown RBP14.6□□□□□ -0.07
SSBP1-212ENST00000489378 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
SSBP1-212ENST00000489378 ADAMTS2O95450 1211 aa14.59□□□□□ -0.07
SSBP1-212ENST00000489378 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
SSBP1-212ENST00000489378 MST1RQ04912 1400 aa14.59□□□□□ -0.07
SSBP1-212ENST00000489378 PTPRUQ92729 1446 aa14.59□□□□□ -0.07
SSBP1-212ENST00000489378 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.07
SSBP1-212ENST00000489378 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
SSBP1-212ENST00000489378 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
SSBP1-212ENST00000489378 DCCP43146 1447 aa14.57□□□□□ -0.08
SSBP1-212ENST00000489378 DAPK1P53355 1430 aa14.55□□□□□ -0.08
SSBP1-212ENST00000489378 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSBP1-212ENST00000489378 USP21Q9UK80 565 aa14.55□□□□□ -0.08
SSBP1-212ENST00000489378 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
SSBP1-212ENST00000489378 RPRD2Q5VT52 1461 aaKnown RBP14.54□□□□□ -0.08
SSBP1-212ENST00000489378 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
SSBP1-212ENST00000489378 TRPC5Q9UL62 973 aaPredicted RBP14.54□□□□□ -0.08
SSBP1-212ENST00000489378 TRPM2O94759 1503 aa14.53□□□□□ -0.08
SSBP1-212ENST00000489378 PTPN23Q9H3S7 1636 aa14.52□□□□□ -0.08
SSBP1-212ENST00000489378 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.09
SSBP1-212ENST00000489378 ATRNO75882 1429 aa14.51□□□□□ -0.09
SSBP1-212ENST00000489378 CCDC125Q86Z20 511 aa14.51□□□□□ -0.09
SSBP1-212ENST00000489378 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
SSBP1-212ENST00000489378 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
SSBP1-212ENST00000489378 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
SSBP1-212ENST00000489378 UNC13BO14795 1591 aa14.5□□□□□ -0.09
SSBP1-212ENST00000489378 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
SSBP1-212ENST00000489378 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
SSBP1-212ENST00000489378 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
SSBP1-212ENST00000489378 LRP5O75197 1615 aa14.47□□□□□ -0.09
SSBP1-212ENST00000489378 NRXN3Q9Y4C0 1643 aa14.47□□□□□ -0.09
SSBP1-212ENST00000489378 PTCH1Q13635 1447 aa14.47□□□□□ -0.09
SSBP1-212ENST00000489378 ADGRL3Q9HAR2 1447 aa14.47□□□□□ -0.09
SSBP1-212ENST00000489378 NALCNQ8IZF0 1738 aa14.46□□□□□ -0.1
SSBP1-212ENST00000489378 LAMC1P11047 1609 aa14.45□□□□□ -0.1
SSBP1-212ENST00000489378 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
SSBP1-212ENST00000489378 C1orf167Q5SNV9 1468 aa14.45□□□□□ -0.1
SSBP1-212ENST00000489378 METP08581 1390 aa14.44□□□□□ -0.1
SSBP1-212ENST00000489378 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
SSBP1-212ENST00000489378 SOS2Q07890 1332 aaPredicted RBP14.44□□□□□ -0.1
SSBP1-212ENST00000489378 BLMP54132 1417 aaPredicted RBP14.43□□□□□ -0.1
SSBP1-212ENST00000489378 ANKRD50Q9ULJ7 1429 aa14.43□□□□□ -0.1
SSBP1-212ENST00000489378 E9PCH4 1651 aa14.43□□□□□ -0.1
SSBP1-212ENST00000489378 ORAI2Q96SN7 254 aa14.42□□□□□ -0.1
SSBP1-212ENST00000489378 ADGRL2O95490 1459 aa14.42□□□□□ -0.1
SSBP1-212ENST00000489378 GJD4Q96KN9 370 aaPredicted RBP14.41□□□□□ -0.1
SSBP1-212ENST00000489378 COL22A1Q8NFW1 1626 aaPredicted RBP14.41□□□□□ -0.1
SSBP1-212ENST00000489378 MYOM2P54296 1465 aa14.4□□□□□ -0.1
SSBP1-212ENST00000489378 BRWD3Q6RI45 1802 aa14.38□□□□□ -0.11
SSBP1-212ENST00000489378 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
SSBP1-212ENST00000489378 GLI3P10071 1580 aa14.38□□□□□ -0.11
SSBP1-212ENST00000489378 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
SSBP1-212ENST00000489378 RALGAPBQ86X10 1494 aa14.36□□□□□ -0.11
SSBP1-212ENST00000489378 HRCP23327 699 aa14.35□□□□□ -0.11
SSBP1-212ENST00000489378 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.34□□□□□ -0.11
SSBP1-212ENST00000489378 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
SSBP1-212ENST00000489378 IQGAP3Q86VI3 1631 aa14.34□□□□□ -0.11
SSBP1-212ENST00000489378 ROBO2Q9HCK4 1378 aa14.32□□□□□ -0.12
SSBP1-212ENST00000489378 SPHKAPQ2M3C7 1700 aa14.32□□□□□ -0.12
SSBP1-212ENST00000489378 PXDNQ92626 1479 aa14.32□□□□□ -0.12
SSBP1-212ENST00000489378 XPCQ01831 940 aaPredicted RBP14.32□□□□□ -0.12
SSBP1-212ENST00000489378 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
SSBP1-212ENST00000489378 UNC5CLQ8IV45 518 aa14.32□□□□□ -0.12
SSBP1-212ENST00000489378 SEPT12Q8IYM1 358 aa14.32□□□□□ -0.12
SSBP1-212ENST00000489378 SLIT2O94813 1529 aa14.31□□□□□ -0.12
SSBP1-212ENST00000489378 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
SSBP1-212ENST00000489378 NPHP3Q7Z494 1330 aa14.29□□□□□ -0.12
SSBP1-212ENST00000489378 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
SSBP1-212ENST00000489378 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-212ENST00000489378 ESCO1Q5FWF5 840 aa14.28□□□□□ -0.12
SSBP1-212ENST00000489378 NEXMIFQ5QGS0 1516 aa14.27□□□□□ -0.12
SSBP1-212ENST00000489378 FOXO3O43524 673 aa14.27□□□□□ -0.12
SSBP1-212ENST00000489378 GABBR2O75899 941 aa14.26□□□□□ -0.13
SSBP1-212ENST00000489378 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
SSBP1-212ENST00000489378 NUP155O75694 1391 aa14.26□□□□□ -0.13
SSBP1-212ENST00000489378 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
SSBP1-212ENST00000489378 YY1P25490 414 aa14.25□□□□□ -0.13
SSBP1-212ENST00000489378 BAG6P46379 1132 aa14.25□□□□□ -0.13
SSBP1-212ENST00000489378 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
SSBP1-212ENST00000489378 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
SSBP1-212ENST00000489378 VPS72Q15906 364 aa14.24□□□□□ -0.13
SSBP1-212ENST00000489378 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
SSBP1-212ENST00000489378 EN1Q05925 392 aaPredicted RBP14.23□□□□□ -0.13
SSBP1-212ENST00000489378 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
SSBP1-212ENST00000489378 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
SSBP1-212ENST00000489378 HFM1A2PYH4 1435 aa14.22□□□□□ -0.13
SSBP1-212ENST00000489378 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
SSBP1-212ENST00000489378 CLTCL1P53675 1640 aa14.21□□□□□ -0.13
SSBP1-212ENST00000489378 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
SSBP1-212ENST00000489378 SPATA31A3Q5VYP0 1347 aa14.21□□□□□ -0.14
SSBP1-212ENST00000489378 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
SSBP1-212ENST00000489378 LRPPRCP42704 1394 aaKnown RBP14.2□□□□□ -0.14
SSBP1-212ENST00000489378 PLCH1Q4KWH8 1693 aa14.19□□□□□ -0.14
SSBP1-212ENST00000489378 A0A0G2JS52 829 aa14.18□□□□□ -0.14
SSBP1-212ENST00000489378 MYT1Q01538 1121 aa14.18□□□□□ -0.14
SSBP1-212ENST00000489378 CABLES1Q8TDN4 633 aa14.18□□□□□ -0.14
SSBP1-212ENST00000489378 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
SSBP1-212ENST00000489378 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
SSBP1-212ENST00000489378 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
SSBP1-212ENST00000489378 FAM182BQ5T319 152 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms