RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
RAB4A-204ENST00000489342 C6orf229H3BNL8 230 aa10.17□□□□□ -0.78
RAB4A-204ENST00000489342 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
RAB4A-204ENST00000489342 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
RAB4A-204ENST00000489342 RIC3Q7Z5B4 369 aa10.15□□□□□ -0.78
RAB4A-204ENST00000489342 USB1Q9BQ65 265 aaKnown RBP10.15□□□□□ -0.78
RAB4A-204ENST00000489342 FAM117AQ9C073 453 aa10.15□□□□□ -0.78
RAB4A-204ENST00000489342 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
RAB4A-204ENST00000489342 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
RAB4A-204ENST00000489342 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
RAB4A-204ENST00000489342 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
RAB4A-204ENST00000489342 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
RAB4A-204ENST00000489342 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
RAB4A-204ENST00000489342 RGS20O76081 388 aa10.13□□□□□ -0.79
RAB4A-204ENST00000489342 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
RAB4A-204ENST00000489342 MSS51Q4VC12 460 aa10.13□□□□□ -0.79
RAB4A-204ENST00000489342 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
RAB4A-204ENST00000489342 MTMR2Q13614 643 aa10.12□□□□□ -0.79
RAB4A-204ENST00000489342 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
RAB4A-204ENST00000489342 PRDM9Q9NQV7 894 aa10.12□□□□□ -0.79
RAB4A-204ENST00000489342 BICRAQ9NZM4 1560 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 SPTLC1O15269 473 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 GJA5P36382 358 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
RAB4A-204ENST00000489342 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 POLR3EQ9NVU0 708 aa10.11□□□□□ -0.79
RAB4A-204ENST00000489342 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
RAB4A-204ENST00000489342 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
RAB4A-204ENST00000489342 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
RAB4A-204ENST00000489342 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
RAB4A-204ENST00000489342 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
RAB4A-204ENST00000489342 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
RAB4A-204ENST00000489342 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
RAB4A-204ENST00000489342 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
RAB4A-204ENST00000489342 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
RAB4A-204ENST00000489342 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
RAB4A-204ENST00000489342 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
RAB4A-204ENST00000489342 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 JUNDP17535 347 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 SKIV2LQ15477 1246 aaKnown RBP10.06□□□□□ -0.8
RAB4A-204ENST00000489342 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
RAB4A-204ENST00000489342 HRCP23327 699 aa10.05□□□□□ -0.8
RAB4A-204ENST00000489342 MMP16P51512 607 aa10.05□□□□□ -0.8
RAB4A-204ENST00000489342 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
RAB4A-204ENST00000489342 CABLES1Q8TDN4 633 aa10.05□□□□□ -0.8
RAB4A-204ENST00000489342 TSC1Q92574 1164 aa10.05□□□□□ -0.8
RAB4A-204ENST00000489342 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
RAB4A-204ENST00000489342 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
RAB4A-204ENST00000489342 SLC19A1P41440 591 aa10.04□□□□□ -0.8
RAB4A-204ENST00000489342 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
RAB4A-204ENST00000489342 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
RAB4A-204ENST00000489342 CC2D2AQ9P2K1 1620 aa10.02□□□□□ -0.81
RAB4A-204ENST00000489342 QPCTQ16769 361 aa10.01□□□□□ -0.81
RAB4A-204ENST00000489342 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
RAB4A-204ENST00000489342 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
RAB4A-204ENST00000489342 LILRB3O75022 631 aa10□□□□□ -0.81
RAB4A-204ENST00000489342 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
RAB4A-204ENST00000489342 CFAP99D6REC4 459 aa9.99□□□□□ -0.81
RAB4A-204ENST00000489342 PROCA1Q8NCQ7 364 aaPredicted RBP9.99□□□□□ -0.81
RAB4A-204ENST00000489342 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
RAB4A-204ENST00000489342 DESI1Q6ICB0 168 aa9.98□□□□□ -0.81
RAB4A-204ENST00000489342 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
RAB4A-204ENST00000489342 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
RAB4A-204ENST00000489342 CCNYL3P0C7X3 344 aa9.97□□□□□ -0.81
RAB4A-204ENST00000489342 RPIAP49247 311 aa9.97□□□□□ -0.81
RAB4A-204ENST00000489342 PTPRNQ16849 979 aa9.97□□□□□ -0.81
RAB4A-204ENST00000489342 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
RAB4A-204ENST00000489342 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
RAB4A-204ENST00000489342 IRX2Q9BZI1 471 aaPredicted RBP9.96□□□□□ -0.82
RAB4A-204ENST00000489342 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
RAB4A-204ENST00000489342 CTHP32929 405 aa9.95□□□□□ -0.82
RAB4A-204ENST00000489342 ZNF697Q5TEC3 545 aa9.95□□□□□ -0.82
RAB4A-204ENST00000489342 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
RAB4A-204ENST00000489342 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
RAB4A-204ENST00000489342 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
RAB4A-204ENST00000489342 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
RAB4A-204ENST00000489342 TRIM32Q13049 653 aa9.92□□□□□ -0.82
RAB4A-204ENST00000489342 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
RAB4A-204ENST00000489342 KCNH2Q12809 1159 aa9.91□□□□□ -0.82
RAB4A-204ENST00000489342 SCRIBQ14160 1630 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 GFRA3O60609 400 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 AP1G2O75843 785 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 FOXC1Q12948 553 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 PPP2R2DQ66LE6 453 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
RAB4A-204ENST00000489342 EIF4G1Q04637 1599 aaKnown RBP9.89□□□□□ -0.83
RAB4A-204ENST00000489342 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
RAB4A-204ENST00000489342 PTCRAQ6ISU1 281 aaPredicted RBP9.89□□□□□ -0.83
RAB4A-204ENST00000489342 PDZRN3Q9UPQ7 1066 aa9.89□□□□□ -0.83
RAB4A-204ENST00000489342 RFC5P40937 340 aa9.88□□□□□ -0.83
RAB4A-204ENST00000489342 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
RAB4A-204ENST00000489342 TNFRSF10AO00220 468 aa9.87□□□□□ -0.83
RAB4A-204ENST00000489342 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
RAB4A-204ENST00000489342 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
RAB4A-204ENST00000489342 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
RAB4A-204ENST00000489342 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms