RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 ARAP1Q96P48 1450 aa10.02□□□□□ -0.81
PDCD4-209ENST00000489049 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
PDCD4-209ENST00000489049 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
PDCD4-209ENST00000489049 LCE2BO14633 110 aa10.01□□□□□ -0.81
PDCD4-209ENST00000489049 TLL1O43897 1013 aa10.01□□□□□ -0.81
PDCD4-209ENST00000489049 OATP04181 439 aa10.01□□□□□ -0.81
PDCD4-209ENST00000489049 SLC10A3P09131 477 aa10.01□□□□□ -0.81
PDCD4-209ENST00000489049 ARHGAP35Q9NRY4 1499 aa10.01□□□□□ -0.81
PDCD4-209ENST00000489049 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
PDCD4-209ENST00000489049 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
PDCD4-209ENST00000489049 WDR62O43379 1518 aa10□□□□□ -0.81
PDCD4-209ENST00000489049 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
PDCD4-209ENST00000489049 VSIG10Q8N0Z9 540 aa9.99□□□□□ -0.81
PDCD4-209ENST00000489049 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDCD4-209ENST00000489049 RNF223E7ERA6 249 aa9.98□□□□□ -0.81
PDCD4-209ENST00000489049 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
PDCD4-209ENST00000489049 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
PDCD4-209ENST00000489049 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
PDCD4-209ENST00000489049 TDRD9Q8NDG6 1382 aaKnown RBP9.97□□□□□ -0.81
PDCD4-209ENST00000489049 GPR37O15354 613 aa9.96□□□□□ -0.82
PDCD4-209ENST00000489049 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
PDCD4-209ENST00000489049 FMN1Q68DA7 1419 aa9.96□□□□□ -0.82
PDCD4-209ENST00000489049 GNPATO15228 680 aa9.95□□□□□ -0.82
PDCD4-209ENST00000489049 FECHP22830 423 aa9.95□□□□□ -0.82
PDCD4-209ENST00000489049 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
PDCD4-209ENST00000489049 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
PDCD4-209ENST00000489049 NR1I2O75469 434 aa9.94□□□□□ -0.82
PDCD4-209ENST00000489049 S1PR4O95977 384 aa9.94□□□□□ -0.82
PDCD4-209ENST00000489049 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
PDCD4-209ENST00000489049 ANKLE1Q8NAG6 615 aa9.94□□□□□ -0.82
PDCD4-209ENST00000489049 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
PDCD4-209ENST00000489049 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
PDCD4-209ENST00000489049 ADH1BP00325 375 aa9.93□□□□□ -0.82
PDCD4-209ENST00000489049 SLC19A1P41440 591 aa9.93□□□□□ -0.82
PDCD4-209ENST00000489049 CASKIN1Q8WXD9 1431 aa9.92□□□□□ -0.82
PDCD4-209ENST00000489049 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
PDCD4-209ENST00000489049 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
PDCD4-209ENST00000489049 RANGAP1P46060 587 aaPredicted RBP9.9□□□□□ -0.82
PDCD4-209ENST00000489049 TRIM67Q6ZTA4 783 aa9.9□□□□□ -0.82
PDCD4-209ENST00000489049 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.83
PDCD4-209ENST00000489049 CLSPNQ9HAW4 1339 aa9.89□□□□□ -0.83
PDCD4-209ENST00000489049 PUS10Q3MIT2 529 aaKnown RBP9.89□□□□□ -0.83
PDCD4-209ENST00000489049 SPRYD7Q5W111 196 aa9.89□□□□□ -0.83
PDCD4-209ENST00000489049 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
PDCD4-209ENST00000489049 CCER1Q8TC90 406 aaPredicted RBP9.89□□□□□ -0.83
PDCD4-209ENST00000489049 DAXXQ9UER7 740 aaPredicted RBP9.89□□□□□ -0.83
PDCD4-209ENST00000489049 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
PDCD4-209ENST00000489049 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
PDCD4-209ENST00000489049 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
PDCD4-209ENST00000489049 SAMD9Q5K651 1589 aa9.88□□□□□ -0.83
PDCD4-209ENST00000489049 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
PDCD4-209ENST00000489049 PBRM1Q86U86 1689 aa9.88□□□□□ -0.83
PDCD4-209ENST00000489049 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
PDCD4-209ENST00000489049 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
PDCD4-209ENST00000489049 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
PDCD4-209ENST00000489049 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
PDCD4-209ENST00000489049 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
PDCD4-209ENST00000489049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDCD4-209ENST00000489049 LRRC9Q6ZRR7 1453 aa9.86□□□□□ -0.83
PDCD4-209ENST00000489049 GPIHBP1Q8IV16 184 aa9.86□□□□□ -0.83
PDCD4-209ENST00000489049 KIAA0586Q9BVV6 1533 aa9.86□□□□□ -0.83
PDCD4-209ENST00000489049 DDX11L8A8MPP1 907 aa9.85□□□□□ -0.83
PDCD4-209ENST00000489049 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
PDCD4-209ENST00000489049 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
PDCD4-209ENST00000489049 IQGAP2Q13576 1575 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 UGGT2Q9NYU1 1516 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 PLA2G2CQ5R387 149 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
PDCD4-209ENST00000489049 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 SPSB2Q99619 263 aa9.84□□□□□ -0.83
PDCD4-209ENST00000489049 PRR20EP86478 221 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 PRR20CP86479 221 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 PRR20DP86480 221 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 PRR20BP86481 221 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 PRR20AP86496 221 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 MORN1Q5T089 497 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 BCANQ96GW7 911 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
PDCD4-209ENST00000489049 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
PDCD4-209ENST00000489049 FUT2Q10981 343 aa9.82□□□□□ -0.84
PDCD4-209ENST00000489049 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
PDCD4-209ENST00000489049 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
PDCD4-209ENST00000489049 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
PDCD4-209ENST00000489049 TTBK1Q5TCY1 1321 aaPredicted RBP9.81□□□□□ -0.84
PDCD4-209ENST00000489049 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
PDCD4-209ENST00000489049 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
PDCD4-209ENST00000489049 GRIN2AQ12879 1464 aa9.8□□□□□ -0.84
PDCD4-209ENST00000489049 SNAPC4Q5SXM2 1469 aa9.8□□□□□ -0.84
PDCD4-209ENST00000489049 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
PDCD4-209ENST00000489049 GCGRP47871 477 aa9.8□□□□□ -0.84
PDCD4-209ENST00000489049 THAP11Q96EK4 314 aa9.8□□□□□ -0.84
PDCD4-209ENST00000489049 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
PDCD4-209ENST00000489049 SOCS7O14512 581 aa9.79□□□□□ -0.84
PDCD4-209ENST00000489049 GDF9O60383 454 aa9.79□□□□□ -0.84
PDCD4-209ENST00000489049 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
PDCD4-209ENST00000489049 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
PDCD4-209ENST00000489049 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
PDCD4-209ENST00000489049 MTUS2Q5JR59 1369 aa9.77□□□□□ -0.84
PDCD4-209ENST00000489049 TNFRSF10AO00220 468 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms