RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
COPS7B-221ENST00000488111 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
COPS7B-221ENST00000488111 POLR1AO95602 1720 aaPredicted RBP18.53■□□□□ 0.56
COPS7B-221ENST00000488111 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
COPS7B-221ENST00000488111 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
COPS7B-221ENST00000488111 DEKP35659 375 aaKnown RBP18.52■□□□□ 0.56
COPS7B-221ENST00000488111 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
COPS7B-221ENST00000488111 SBNO2Q9Y2G9 1366 aa18.52■□□□□ 0.55
COPS7B-221ENST00000488111 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
COPS7B-221ENST00000488111 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
COPS7B-221ENST00000488111 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
COPS7B-221ENST00000488111 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
COPS7B-221ENST00000488111 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
COPS7B-221ENST00000488111 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
COPS7B-221ENST00000488111 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
COPS7B-221ENST00000488111 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
COPS7B-221ENST00000488111 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
COPS7B-221ENST00000488111 KCNA6P17658 529 aa18.47■□□□□ 0.55
COPS7B-221ENST00000488111 TECPR2O15040 1411 aa18.47■□□□□ 0.55
COPS7B-221ENST00000488111 PANK3Q9H999 370 aa18.47■□□□□ 0.55
COPS7B-221ENST00000488111 SRPK2P78362 688 aaKnown RBP18.46■□□□□ 0.55
COPS7B-221ENST00000488111 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
COPS7B-221ENST00000488111 DIP2AQ14689 1571 aa18.46■□□□□ 0.55
COPS7B-221ENST00000488111 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
COPS7B-221ENST00000488111 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
COPS7B-221ENST00000488111 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
COPS7B-221ENST00000488111 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
COPS7B-221ENST00000488111 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
COPS7B-221ENST00000488111 FAM135BQ49AJ0 1406 aa18.44■□□□□ 0.54
COPS7B-221ENST00000488111 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
COPS7B-221ENST00000488111 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
COPS7B-221ENST00000488111 CPS1P31327 1500 aa18.43■□□□□ 0.54
COPS7B-221ENST00000488111 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
COPS7B-221ENST00000488111 KNDC1Q76NI1 1749 aa18.42■□□□□ 0.54
COPS7B-221ENST00000488111 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
COPS7B-221ENST00000488111 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-221ENST00000488111 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-221ENST00000488111 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
COPS7B-221ENST00000488111 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
COPS7B-221ENST00000488111 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
COPS7B-221ENST00000488111 PUS7Q96PZ0 661 aaKnown RBP18.37■□□□□ 0.53
COPS7B-221ENST00000488111 MYOM1P52179 1685 aa18.36■□□□□ 0.53
COPS7B-221ENST00000488111 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
COPS7B-221ENST00000488111 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
COPS7B-221ENST00000488111 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
COPS7B-221ENST00000488111 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
COPS7B-221ENST00000488111 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
COPS7B-221ENST00000488111 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
COPS7B-221ENST00000488111 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
COPS7B-221ENST00000488111 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.53
COPS7B-221ENST00000488111 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.53
COPS7B-221ENST00000488111 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
COPS7B-221ENST00000488111 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
COPS7B-221ENST00000488111 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
COPS7B-221ENST00000488111 PRR36Q9H6K5 1346 aa18.31■□□□□ 0.52
COPS7B-221ENST00000488111 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
COPS7B-221ENST00000488111 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
COPS7B-221ENST00000488111 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
COPS7B-221ENST00000488111 A0A1W2PP64 1363 aa18.27■□□□□ 0.52
COPS7B-221ENST00000488111 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.52
COPS7B-221ENST00000488111 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.52
COPS7B-221ENST00000488111 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.51
COPS7B-221ENST00000488111 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.51
COPS7B-221ENST00000488111 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
COPS7B-221ENST00000488111 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
COPS7B-221ENST00000488111 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
COPS7B-221ENST00000488111 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
COPS7B-221ENST00000488111 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
COPS7B-221ENST00000488111 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
COPS7B-221ENST00000488111 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
COPS7B-221ENST00000488111 ZNF335Q9H4Z2 1342 aaPredicted RBP18.25■□□□□ 0.51
COPS7B-221ENST00000488111 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
COPS7B-221ENST00000488111 ATP7BP35670 1465 aa18.25■□□□□ 0.51
COPS7B-221ENST00000488111 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
COPS7B-221ENST00000488111 NBR1Q14596 966 aa18.24■□□□□ 0.51
COPS7B-221ENST00000488111 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
COPS7B-221ENST00000488111 RALBP1Q15311 655 aa18.23■□□□□ 0.51
COPS7B-221ENST00000488111 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
COPS7B-221ENST00000488111 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
COPS7B-221ENST00000488111 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
COPS7B-221ENST00000488111 ADGRL3Q9HAR2 1447 aa18.22■□□□□ 0.51
COPS7B-221ENST00000488111 ANO8Q9HCE9 1232 aaPredicted RBP18.22■□□□□ 0.51
COPS7B-221ENST00000488111 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
COPS7B-221ENST00000488111 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
COPS7B-221ENST00000488111 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
COPS7B-221ENST00000488111 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
COPS7B-221ENST00000488111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
COPS7B-221ENST00000488111 ACEP12821 1306 aa18.19■□□□□ 0.5
COPS7B-221ENST00000488111 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
COPS7B-221ENST00000488111 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
COPS7B-221ENST00000488111 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
COPS7B-221ENST00000488111 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
COPS7B-221ENST00000488111 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
COPS7B-221ENST00000488111 USP32Q8NFA0 1604 aa18.18■□□□□ 0.5
COPS7B-221ENST00000488111 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
COPS7B-221ENST00000488111 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
COPS7B-221ENST00000488111 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
COPS7B-221ENST00000488111 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
COPS7B-221ENST00000488111 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
COPS7B-221ENST00000488111 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms