RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 PNPLA6Q8IY17 1366 aa29.93■■■□□ 2.38
TRIM8-204ENST00000487927 ABCC11Q96J66 1382 aa29.93■■■□□ 2.38
TRIM8-204ENST00000487927 NUTM2BA6NNL0 878 aaPredicted RBP29.93■■■□□ 2.38
TRIM8-204ENST00000487927 NUTM2EB1AL46 878 aaPredicted RBP29.93■■■□□ 2.38
TRIM8-204ENST00000487927 NUTM2AQ8IVF1 878 aaPredicted RBP29.93■■■□□ 2.38
TRIM8-204ENST00000487927 MYOM2P54296 1465 aa29.93■■■□□ 2.38
TRIM8-204ENST00000487927 WAPLQ7Z5K2 1190 aa29.91■■■□□ 2.38
TRIM8-204ENST00000487927 PCGF6Q9BYE7 350 aa29.91■■■□□ 2.38
TRIM8-204ENST00000487927 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
TRIM8-204ENST00000487927 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.38
TRIM8-204ENST00000487927 SOS2Q07890 1332 aaPredicted RBP29.89■■■□□ 2.38
TRIM8-204ENST00000487927 ZNF772Q68DY9 489 aaPredicted RBP29.87■■■□□ 2.37
TRIM8-204ENST00000487927 C14orf93Q9H972 538 aaKnown RBP29.87■■■□□ 2.37
TRIM8-204ENST00000487927 FMN2Q9NZ56 1722 aa29.84■■■□□ 2.37
TRIM8-204ENST00000487927 CFAP70Q5T0N1 1121 aa29.83■■■□□ 2.37
TRIM8-204ENST00000487927 ESCO1Q5FWF5 840 aa29.81■■■□□ 2.36
TRIM8-204ENST00000487927 AFF2P51816 1311 aa29.8■■■□□ 2.36
TRIM8-204ENST00000487927 HRCP23327 699 aa29.8■■■□□ 2.36
TRIM8-204ENST00000487927 PXDNQ92626 1479 aa29.8■■■□□ 2.36
TRIM8-204ENST00000487927 COL22A1Q8NFW1 1626 aaPredicted RBP29.79■■■□□ 2.36
TRIM8-204ENST00000487927 SIRT1Q96EB6 747 aa29.79■■■□□ 2.36
TRIM8-204ENST00000487927 DHX57Q6P158 1386 aaKnown RBP29.77■■■□□ 2.36
TRIM8-204ENST00000487927 NUTM2FA1L443 756 aa29.77■■■□□ 2.36
TRIM8-204ENST00000487927 NPHP3Q7Z494 1330 aa29.76■■■□□ 2.36
TRIM8-204ENST00000487927 ADGRB1O14514 1584 aa29.75■■■□□ 2.35
TRIM8-204ENST00000487927 C8orf37Q96NL8 207 aa29.75■■■□□ 2.35
TRIM8-204ENST00000487927 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
TRIM8-204ENST00000487927 FOXO3O43524 673 aa29.73■■■□□ 2.35
TRIM8-204ENST00000487927 KIF1AQ12756 1690 aa29.72■■■□□ 2.35
TRIM8-204ENST00000487927 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
TRIM8-204ENST00000487927 RXRBP28702 533 aa29.71■■■□□ 2.35
TRIM8-204ENST00000487927 ADAMTS2O95450 1211 aa29.7■■■□□ 2.35
TRIM8-204ENST00000487927 XPCQ01831 940 aaPredicted RBP29.7■■■□□ 2.35
TRIM8-204ENST00000487927 CDK12Q9NYV4 1490 aaPredicted RBP29.69■■■□□ 2.34
TRIM8-204ENST00000487927 PRAM1Q96QH2 718 aa29.69■■■□□ 2.34
TRIM8-204ENST00000487927 DCAF11Q8TEB1 546 aa29.67■■■□□ 2.34
TRIM8-204ENST00000487927 KDM2AQ9Y2K7 1162 aa29.67■■■□□ 2.34
TRIM8-204ENST00000487927 MARF1Q9Y4F3 1742 aaKnown RBP29.66■■■□□ 2.34
TRIM8-204ENST00000487927 SAFB2Q14151 953 aaKnown RBP eCLIP29.65■■■□□ 2.34
TRIM8-204ENST00000487927 NGLY1Q96IV0 654 aa29.65■■■□□ 2.34
TRIM8-204ENST00000487927 QTRT2Q9H974 415 aaKnown RBP29.64■■■□□ 2.34
TRIM8-204ENST00000487927 ADGRB2O60241 1585 aa29.64■■■□□ 2.33
TRIM8-204ENST00000487927 USP32Q8NFA0 1604 aa29.63■■■□□ 2.33
TRIM8-204ENST00000487927 POGKQ9P215 609 aa29.6■■■□□ 2.33
TRIM8-204ENST00000487927 RGS12O14924 1447 aa29.6■■■□□ 2.33
TRIM8-204ENST00000487927 RBM6P78332 1123 aaKnown RBP29.59■■■□□ 2.33
TRIM8-204ENST00000487927 STAC3Q96MF2 364 aa29.59■■■□□ 2.33
TRIM8-204ENST00000487927 TRAK1Q9UPV9 953 aa29.59■■■□□ 2.33
TRIM8-204ENST00000487927 SPATA31A3Q5VYP0 1347 aa29.58■■■□□ 2.33
TRIM8-204ENST00000487927 FNBP4Q8N3X1 1017 aaPredicted RBP29.58■■■□□ 2.33
TRIM8-204ENST00000487927 PHF8Q9UPP1 1060 aa29.58■■■□□ 2.33
TRIM8-204ENST00000487927 KRT28Q7Z3Y7 464 aa29.56■■■□□ 2.32
TRIM8-204ENST00000487927 UPF1Q92900 1129 aaKnown RBP eCLIP29.56■■■□□ 2.32
TRIM8-204ENST00000487927 USP21Q9UK80 565 aa29.56■■■□□ 2.32
TRIM8-204ENST00000487927 ANKARQ7Z5J8 1434 aa29.55■■■□□ 2.32
TRIM8-204ENST00000487927 ARHGEF28Q8N1W1 1705 aaKnown RBP29.55■■■□□ 2.32
TRIM8-204ENST00000487927 ATRNO75882 1429 aa29.53■■■□□ 2.32
TRIM8-204ENST00000487927 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
TRIM8-204ENST00000487927 TNS3Q68CZ2 1445 aa29.52■■■□□ 2.32
TRIM8-204ENST00000487927 BCL9LQ86UU0 1499 aa29.51■■■□□ 2.31
TRIM8-204ENST00000487927 MINK1Q8N4C8 1332 aaPredicted RBP29.5■■■□□ 2.31
TRIM8-204ENST00000487927 TRPC5Q9UL62 973 aaPredicted RBP29.5■■■□□ 2.31
TRIM8-204ENST00000487927 TULP4Q9NRJ4 1543 aa29.48■■■□□ 2.31
TRIM8-204ENST00000487927 ABCA3Q99758 1704 aa29.48■■■□□ 2.31
TRIM8-204ENST00000487927 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.48■■■□□ 2.31
TRIM8-204ENST00000487927 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
TRIM8-204ENST00000487927 PRR36Q9H6K5 1346 aa29.47■■■□□ 2.31
TRIM8-204ENST00000487927 PSME1Q06323 249 aa29.47■■■□□ 2.31
TRIM8-204ENST00000487927 PMFBP1Q8TBY8 1022 aa29.47■■■□□ 2.31
TRIM8-204ENST00000487927 SBNO1A3KN83 1393 aa29.47■■■□□ 2.31
TRIM8-204ENST00000487927 TRPM3Q9HCF6 1732 aaPredicted RBP29.46■■■□□ 2.31
TRIM8-204ENST00000487927 WASLO00401 505 aaPredicted RBP29.44■■■□□ 2.3
TRIM8-204ENST00000487927 SLIT2O94813 1529 aa29.43■■■□□ 2.3
TRIM8-204ENST00000487927 EIF3AQ14152 1382 aaKnown RBP29.42■■■□□ 2.3
TRIM8-204ENST00000487927 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
TRIM8-204ENST00000487927 CABLES1Q8TDN4 633 aa29.4■■■□□ 2.3
TRIM8-204ENST00000487927 ARHGEF10O15013 1369 aa29.39■■■□□ 2.3
TRIM8-204ENST00000487927 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
TRIM8-204ENST00000487927 ITSN1Q15811 1721 aa29.38■■■□□ 2.29
TRIM8-204ENST00000487927 ATP7BP35670 1465 aa29.37■■■□□ 2.29
TRIM8-204ENST00000487927 LMOD2Q6P5Q4 547 aa29.36■■■□□ 2.29
TRIM8-204ENST00000487927 GLI3P10071 1580 aa29.35■■■□□ 2.29
TRIM8-204ENST00000487927 PLEKHG5O94827 1062 aa29.35■■■□□ 2.29
TRIM8-204ENST00000487927 UNC5CLQ8IV45 518 aa29.35■■■□□ 2.29
TRIM8-204ENST00000487927 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
TRIM8-204ENST00000487927 NWD2Q9ULI1 1742 aa29.34■■■□□ 2.29
TRIM8-204ENST00000487927 NBPF1Q3BBV0 1214 aa29.34■■■□□ 2.29
TRIM8-204ENST00000487927 HAP1P54257 671 aaPredicted RBP29.33■■■□□ 2.29
TRIM8-204ENST00000487927 GPRASP1Q5JY77 1395 aa29.33■■■□□ 2.29
TRIM8-204ENST00000487927 CRYBG1Q9Y4K1 1723 aa29.32■■■□□ 2.28
TRIM8-204ENST00000487927 TOPAZ1Q8N9V7 1692 aa29.32■■■□□ 2.28
TRIM8-204ENST00000487927 RALGAPBQ86X10 1494 aa29.32■■■□□ 2.28
TRIM8-204ENST00000487927 ATAD2Q6PL18 1390 aa29.31■■■□□ 2.28
TRIM8-204ENST00000487927 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
TRIM8-204ENST00000487927 NGDNQ8NEJ9 315 aaKnown RBP29.28■■■□□ 2.28
TRIM8-204ENST00000487927 CDK19Q9BWU1 502 aa29.28■■■□□ 2.28
TRIM8-204ENST00000487927 BRWD3Q6RI45 1802 aa29.25■■■□□ 2.27
TRIM8-204ENST00000487927 FAM83GA6ND36 823 aa29.25■■■□□ 2.27
TRIM8-204ENST00000487927 L3MBTL2Q969R5 705 aa29.25■■■□□ 2.27
TRIM8-204ENST00000487927 NRAPQ86VF7 1730 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms