RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 TMEM94Q12767 1356 aa8.61□□□□□ -1.03
MACF1-221ENST00000487656 TSHZ2Q9NRE2 1034 aa8.61□□□□□ -1.03
MACF1-221ENST00000487656 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
MACF1-221ENST00000487656 LMTK2Q8IWU2 1503 aa8.6□□□□□ -1.03
MACF1-221ENST00000487656 RYDENQ9NUL5 291 aaKnown RBP8.6□□□□□ -1.03
MACF1-221ENST00000487656 RGS17Q9UGC6 210 aaPredicted RBP8.6□□□□□ -1.03
MACF1-221ENST00000487656 MSH6P52701 1360 aa8.6□□□□□ -1.03
MACF1-221ENST00000487656 TET3O43151 1660 aa8.59□□□□□ -1.03
MACF1-221ENST00000487656 GTPBP6O43824 516 aaPredicted RBP8.59□□□□□ -1.03
MACF1-221ENST00000487656 PPP1R15AO75807 674 aaPredicted RBP8.59□□□□□ -1.03
MACF1-221ENST00000487656 FAM50AQ14320 339 aaKnown RBP8.59□□□□□ -1.03
MACF1-221ENST00000487656 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
MACF1-221ENST00000487656 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
MACF1-221ENST00000487656 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
MACF1-221ENST00000487656 NOS1P29475 1434 aa8.59□□□□□ -1.03
MACF1-221ENST00000487656 MAP3K13O43283 966 aa8.58□□□□□ -1.04
MACF1-221ENST00000487656 PSEN1P49768 467 aa8.58□□□□□ -1.04
MACF1-221ENST00000487656 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.58□□□□□ -1.04
MACF1-221ENST00000487656 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
MACF1-221ENST00000487656 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
MACF1-221ENST00000487656 RPRD2Q5VT52 1461 aaKnown RBP8.57□□□□□ -1.04
MACF1-221ENST00000487656 CHD2O14647 1828 aaKnown RBP8.57□□□□□ -1.04
MACF1-221ENST00000487656 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 ADGRB3O60242 1522 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 MYO5BQ9ULV0 1848 aa8.57□□□□□ -1.04
MACF1-221ENST00000487656 ANKRD50Q9ULJ7 1429 aa8.56□□□□□ -1.04
MACF1-221ENST00000487656 POTEAQ6S8J7 498 aa8.56□□□□□ -1.04
MACF1-221ENST00000487656 PLEKHG1Q9ULL1 1385 aa8.56□□□□□ -1.04
MACF1-221ENST00000487656 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
MACF1-221ENST00000487656 PHLPP1O60346 1717 aa8.55□□□□□ -1.04
MACF1-221ENST00000487656 JCADQ9P266 1359 aa8.55□□□□□ -1.04
MACF1-221ENST00000487656 NWD1Q149M9 1564 aa8.55□□□□□ -1.04
MACF1-221ENST00000487656 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
MACF1-221ENST00000487656 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
MACF1-221ENST00000487656 ATF3P18847 181 aa8.54□□□□□ -1.04
MACF1-221ENST00000487656 C19orf44Q9H6X5 657 aa8.54□□□□□ -1.04
MACF1-221ENST00000487656 GCC2Q8IWJ2 1684 aa8.53□□□□□ -1.04
MACF1-221ENST00000487656 CADPS2Q86UW7 1296 aa8.53□□□□□ -1.04
MACF1-221ENST00000487656 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
MACF1-221ENST00000487656 TMEM131LA2VDJ0 1609 aa8.53□□□□□ -1.04
MACF1-221ENST00000487656 ZFYVE9O95405 1425 aa8.53□□□□□ -1.04
MACF1-221ENST00000487656 C19orf67A6NJJ6 358 aa8.52□□□□□ -1.05
MACF1-221ENST00000487656 MEX3CQ5U5Q3 659 aaKnown RBP8.52□□□□□ -1.05
MACF1-221ENST00000487656 ZNF772Q68DY9 489 aaPredicted RBP8.52□□□□□ -1.05
MACF1-221ENST00000487656 SPATA31A6Q5VVP1 1343 aa8.52□□□□□ -1.05
MACF1-221ENST00000487656 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
MACF1-221ENST00000487656 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
MACF1-221ENST00000487656 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
MACF1-221ENST00000487656 E9PCH4 1651 aa8.49□□□□□ -1.05
MACF1-221ENST00000487656 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.49□□□□□ -1.05
MACF1-221ENST00000487656 UNC13BO14795 1591 aa8.49□□□□□ -1.05
MACF1-221ENST00000487656 DIP2AQ14689 1571 aa8.49□□□□□ -1.05
MACF1-221ENST00000487656 NUP155O75694 1391 aa8.48□□□□□ -1.05
MACF1-221ENST00000487656 ROCK1Q13464 1354 aa8.48□□□□□ -1.05
MACF1-221ENST00000487656 ADAMTS13Q76LX8 1427 aa8.48□□□□□ -1.05
MACF1-221ENST00000487656 COL16A1Q07092 1604 aaPredicted RBP8.48□□□□□ -1.05
MACF1-221ENST00000487656 CABP2Q9NPB3 220 aa8.48□□□□□ -1.05
MACF1-221ENST00000487656 TRPM2O94759 1503 aa8.48□□□□□ -1.05
MACF1-221ENST00000487656 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
MACF1-221ENST00000487656 RXRBP28702 533 aa8.47□□□□□ -1.05
MACF1-221ENST00000487656 ITGAEP38570 1179 aa8.47□□□□□ -1.05
MACF1-221ENST00000487656 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
MACF1-221ENST00000487656 SHPRHQ149N8 1683 aa8.46□□□□□ -1.05
MACF1-221ENST00000487656 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 NUTM2EB1AL46 878 aaPredicted RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 BRINP3Q76B58 766 aa8.46□□□□□ -1.06
MACF1-221ENST00000487656 NUTM2AQ8IVF1 878 aaPredicted RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
MACF1-221ENST00000487656 LRRC59Q96AG4 307 aaKnown RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 AHDC1Q5TGY3 1603 aaPredicted RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 SETD1AO15047 1707 aaKnown RBP8.46□□□□□ -1.06
MACF1-221ENST00000487656 HAX1O00165 279 aa8.45□□□□□ -1.06
MACF1-221ENST00000487656 EFCAB3Q8N7B9 438 aa8.45□□□□□ -1.06
MACF1-221ENST00000487656 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
MACF1-221ENST00000487656 DCCP43146 1447 aa8.45□□□□□ -1.06
MACF1-221ENST00000487656 SOX12O15370 315 aa8.44□□□□□ -1.06
MACF1-221ENST00000487656 MS4A3Q96HJ5 214 aa8.44□□□□□ -1.06
MACF1-221ENST00000487656 MFRPQ9BY79 579 aa8.44□□□□□ -1.06
MACF1-221ENST00000487656 PTPRUQ92729 1446 aa8.44□□□□□ -1.06
MACF1-221ENST00000487656 LRP6O75581 1613 aa8.43□□□□□ -1.06
MACF1-221ENST00000487656 NLRP6P59044 892 aa8.43□□□□□ -1.06
MACF1-221ENST00000487656 GOLGA2Q08379 1002 aa8.43□□□□□ -1.06
MACF1-221ENST00000487656 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
MACF1-221ENST00000487656 SPHKAPQ2M3C7 1700 aa8.43□□□□□ -1.06
MACF1-221ENST00000487656 AFF2P51816 1311 aa8.42□□□□□ -1.06
MACF1-221ENST00000487656 SETD5Q9C0A6 1442 aa8.42□□□□□ -1.06
MACF1-221ENST00000487656 SETBP1Q9Y6X0 1596 aa8.42□□□□□ -1.06
MACF1-221ENST00000487656 KIF1BO60333 1816 aa8.42□□□□□ -1.06
MACF1-221ENST00000487656 METP08581 1390 aa8.41□□□□□ -1.06
MACF1-221ENST00000487656 QTRT2Q9H974 415 aaKnown RBP8.41□□□□□ -1.06
MACF1-221ENST00000487656 XRN1Q8IZH2 1706 aaKnown RBP8.4□□□□□ -1.06
MACF1-221ENST00000487656 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.06
MACF1-221ENST00000487656 ASXL1Q8IXJ9 1541 aa8.4□□□□□ -1.06
MACF1-221ENST00000487656 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.06
MACF1-221ENST00000487656 MST1RQ04912 1400 aa8.4□□□□□ -1.06
MACF1-221ENST00000487656 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
MACF1-221ENST00000487656 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms