RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
NUDCD3-209ENST00000487118 TECPR2O15040 1411 aa11.86□□□□□ -0.51
NUDCD3-209ENST00000487118 MYOM1P52179 1685 aa11.86□□□□□ -0.51
NUDCD3-209ENST00000487118 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 METP08581 1390 aa11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
NUDCD3-209ENST00000487118 CPS1P31327 1500 aa11.84□□□□□ -0.51
NUDCD3-209ENST00000487118 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
NUDCD3-209ENST00000487118 PRKRIP1Q9H875 184 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-209ENST00000487118 STK26Q9P289 416 aa11.83□□□□□ -0.52
NUDCD3-209ENST00000487118 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
NUDCD3-209ENST00000487118 XIRP1Q702N8 1843 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-209ENST00000487118 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-209ENST00000487118 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-209ENST00000487118 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
NUDCD3-209ENST00000487118 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
NUDCD3-209ENST00000487118 EVC2Q86UK5 1308 aa11.81□□□□□ -0.52
NUDCD3-209ENST00000487118 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-209ENST00000487118 PANK3Q9H999 370 aa11.8□□□□□ -0.52
NUDCD3-209ENST00000487118 ANKLE2Q86XL3 938 aa11.79□□□□□ -0.52
NUDCD3-209ENST00000487118 POGKQ9P215 609 aa11.79□□□□□ -0.52
NUDCD3-209ENST00000487118 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
NUDCD3-209ENST00000487118 BCANQ96GW7 911 aa11.78□□□□□ -0.52
NUDCD3-209ENST00000487118 PIK3R4Q99570 1358 aa11.78□□□□□ -0.52
NUDCD3-209ENST00000487118 PLEKHH1Q9ULM0 1364 aa11.78□□□□□ -0.52
NUDCD3-209ENST00000487118 XRN1Q8IZH2 1706 aaKnown RBP11.77□□□□□ -0.52
NUDCD3-209ENST00000487118 PARD3Q8TEW0 1356 aa11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 NPC1L1Q9UHC9 1359 aa11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.53
NUDCD3-209ENST00000487118 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 RALBP1Q15311 655 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 ROBO2Q9HCK4 1378 aa11.76□□□□□ -0.53
NUDCD3-209ENST00000487118 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUDCD3-209ENST00000487118 WAPLQ7Z5K2 1190 aa11.75□□□□□ -0.53
NUDCD3-209ENST00000487118 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
NUDCD3-209ENST00000487118 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
NUDCD3-209ENST00000487118 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
NUDCD3-209ENST00000487118 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
NUDCD3-209ENST00000487118 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
NUDCD3-209ENST00000487118 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
NUDCD3-209ENST00000487118 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
NUDCD3-209ENST00000487118 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-209ENST00000487118 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-209ENST00000487118 CCDC184Q52MB2 194 aa11.71□□□□□ -0.53
NUDCD3-209ENST00000487118 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
NUDCD3-209ENST00000487118 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
NUDCD3-209ENST00000487118 BRD4O60885 1362 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-209ENST00000487118 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
NUDCD3-209ENST00000487118 YTHDC1Q96MU7 727 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-209ENST00000487118 ATP7BP35670 1465 aa11.7□□□□□ -0.54
NUDCD3-209ENST00000487118 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
NUDCD3-209ENST00000487118 MRS2Q9HD23 443 aa11.69□□□□□ -0.54
NUDCD3-209ENST00000487118 NWD1Q149M9 1564 aa11.69□□□□□ -0.54
NUDCD3-209ENST00000487118 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-209ENST00000487118 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
NUDCD3-209ENST00000487118 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
NUDCD3-209ENST00000487118 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-209ENST00000487118 KCNA6P17658 529 aa11.67□□□□□ -0.54
NUDCD3-209ENST00000487118 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
NUDCD3-209ENST00000487118 NSD2O96028 1365 aa11.67□□□□□ -0.54
NUDCD3-209ENST00000487118 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-209ENST00000487118 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
NUDCD3-209ENST00000487118 CDC42BPGQ6DT37 1551 aa11.66□□□□□ -0.54
NUDCD3-209ENST00000487118 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
NUDCD3-209ENST00000487118 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-209ENST00000487118 CPSF1Q10570 1443 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-209ENST00000487118 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
NUDCD3-209ENST00000487118 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 PPP2R1AP30153 589 aa11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 MEX3CQ5U5Q3 659 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
NUDCD3-209ENST00000487118 ANKARQ7Z5J8 1434 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
NUDCD3-209ENST00000487118 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms