RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 NEUROD1Q13562 356 aa32.41■■■□□ 2.78
CDHR3-212ENST00000487084 SAFB2Q14151 953 aaKnown RBP eCLIP32.41■■■□□ 2.78
CDHR3-212ENST00000487084 SIRT1Q96EB6 747 aa32.4■■■□□ 2.78
CDHR3-212ENST00000487084 PRAM1Q96QH2 718 aa32.4■■■□□ 2.78
CDHR3-212ENST00000487084 PHF23Q9BUL5 403 aaPredicted RBP32.4■■■□□ 2.78
CDHR3-212ENST00000487084 TRAK1Q9UPV9 953 aa32.39■■■□□ 2.78
CDHR3-212ENST00000487084 JCADQ9P266 1359 aa32.39■■■□□ 2.78
CDHR3-212ENST00000487084 POGKQ9P215 609 aa32.38■■■□□ 2.77
CDHR3-212ENST00000487084 NUTM2FA1L443 756 aa32.37■■■□□ 2.77
CDHR3-212ENST00000487084 DDX17Q92841 729 aaKnown RBP32.37■■■□□ 2.77
CDHR3-212ENST00000487084 ORAI2Q96SN7 254 aa32.37■■■□□ 2.77
CDHR3-212ENST00000487084 DLC1Q96QB1 1528 aa32.36■■■□□ 2.77
CDHR3-212ENST00000487084 L3MBTL2Q969R5 705 aa32.33■■■□□ 2.77
CDHR3-212ENST00000487084 ESCO1Q5FWF5 840 aa32.32■■■□□ 2.76
CDHR3-212ENST00000487084 NHSL1Q5SYE7 1610 aa32.32■■■□□ 2.76
CDHR3-212ENST00000487084 ILDR2Q71H61 639 aa32.3■■■□□ 2.76
CDHR3-212ENST00000487084 LRRC59Q96AG4 307 aaKnown RBP32.25■■■□□ 2.75
CDHR3-212ENST00000487084 FMN2Q9NZ56 1722 aa32.25■■■□□ 2.75
CDHR3-212ENST00000487084 MINK1Q8N4C8 1332 aaPredicted RBP32.25■■■□□ 2.75
CDHR3-212ENST00000487084 HIRIP3Q9BW71 556 aaPredicted RBP32.24■■■□□ 2.75
CDHR3-212ENST00000487084 NBPF1Q3BBV0 1214 aa32.23■■■□□ 2.75
CDHR3-212ENST00000487084 SPATA31A6Q5VVP1 1343 aa32.23■■■□□ 2.75
CDHR3-212ENST00000487084 KIAA1210Q9ULL0 1709 aa32.23■■■□□ 2.75
CDHR3-212ENST00000487084 SHPRHQ149N8 1683 aa32.22■■■□□ 2.75
CDHR3-212ENST00000487084 NPHP3Q7Z494 1330 aa32.19■■■□□ 2.74
CDHR3-212ENST00000487084 ARHGEF28Q8N1W1 1705 aaKnown RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 NUTM2BA6NNL0 878 aaPredicted RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 NUTM2EB1AL46 878 aaPredicted RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 FOXO3O43524 673 aa32.18■■■□□ 2.74
CDHR3-212ENST00000487084 MEX3CQ5U5Q3 659 aaKnown RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 NUTM2AQ8IVF1 878 aaPredicted RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 SOS2Q07890 1332 aaPredicted RBP32.18■■■□□ 2.74
CDHR3-212ENST00000487084 ADGRB2O60241 1585 aa32.17■■■□□ 2.74
CDHR3-212ENST00000487084 LRP6O75581 1613 aa32.16■■■□□ 2.74
CDHR3-212ENST00000487084 XPCQ01831 940 aaPredicted RBP32.16■■■□□ 2.74
CDHR3-212ENST00000487084 PNPLA6Q8IY17 1366 aa32.15■■■□□ 2.74
CDHR3-212ENST00000487084 PCGF6Q9BYE7 350 aa32.14■■■□□ 2.74
CDHR3-212ENST00000487084 TONSLQ96HA7 1378 aa32.13■■■□□ 2.73
CDHR3-212ENST00000487084 RGS17Q9UGC6 210 aaPredicted RBP32.11■■■□□ 2.73
CDHR3-212ENST00000487084 PHF8Q9UPP1 1060 aa32.11■■■□□ 2.73
CDHR3-212ENST00000487084 KIF1AQ12756 1690 aa32.11■■■□□ 2.73
CDHR3-212ENST00000487084 ANKARQ7Z5J8 1434 aa32.1■■■□□ 2.73
CDHR3-212ENST00000487084 WASLO00401 505 aaPredicted RBP32.1■■■□□ 2.73
CDHR3-212ENST00000487084 PXDNQ92626 1479 aa32.1■■■□□ 2.73
CDHR3-212ENST00000487084 EIF3AQ14152 1382 aaKnown RBP32.09■■■□□ 2.73
CDHR3-212ENST00000487084 RGPD8O14715 1765 aaPredicted RBP32.08■■■□□ 2.73
CDHR3-212ENST00000487084 ROCK2O75116 1388 aaKnown RBP32.07■■■□□ 2.72
CDHR3-212ENST00000487084 TRPM1Q7Z4N2 1603 aa32.06■■■□□ 2.72
CDHR3-212ENST00000487084 TULP4Q9NRJ4 1543 aa32.05■■■□□ 2.72
CDHR3-212ENST00000487084 USP32Q8NFA0 1604 aa32.05■■■□□ 2.72
CDHR3-212ENST00000487084 PMFBP1Q8TBY8 1022 aa32.05■■■□□ 2.72
CDHR3-212ENST00000487084 PRR36Q9H6K5 1346 aa32.03■■■□□ 2.72
CDHR3-212ENST00000487084 NBPF8Q3BBV2 869 aa32.03■■■□□ 2.72
CDHR3-212ENST00000487084 KRT28Q7Z3Y7 464 aa32.03■■■□□ 2.72
CDHR3-212ENST00000487084 CENPJQ9HC77 1338 aaPredicted RBP32.02■■■□□ 2.72
CDHR3-212ENST00000487084 PSME1Q06323 249 aa31.99■■■□□ 2.71
CDHR3-212ENST00000487084 POTEAQ6S8J7 498 aa31.99■■■□□ 2.71
CDHR3-212ENST00000487084 CDK19Q9BWU1 502 aa31.99■■■□□ 2.71
CDHR3-212ENST00000487084 ADAMTS2O95450 1211 aa31.98■■■□□ 2.71
CDHR3-212ENST00000487084 NUDT16Q96DE0 195 aaKnown RBP31.96■■■□□ 2.71
CDHR3-212ENST00000487084 C8orf37Q96NL8 207 aa31.96■■■□□ 2.71
CDHR3-212ENST00000487084 SPATA31A3Q5VYP0 1347 aa31.96■■■□□ 2.71
CDHR3-212ENST00000487084 SOCS7O14512 581 aa31.94■■■□□ 2.7
CDHR3-212ENST00000487084 ATP7BP35670 1465 aa31.94■■■□□ 2.7
CDHR3-212ENST00000487084 COL22A1Q8NFW1 1626 aaPredicted RBP31.93■■■□□ 2.7
CDHR3-212ENST00000487084 ZNF772Q68DY9 489 aaPredicted RBP31.93■■■□□ 2.7
CDHR3-212ENST00000487084 QRICH2Q9H0J4 1663 aa31.92■■■□□ 2.7
CDHR3-212ENST00000487084 LMOD2Q6P5Q4 547 aa31.92■■■□□ 2.7
CDHR3-212ENST00000487084 NGDNQ8NEJ9 315 aaKnown RBP31.92■■■□□ 2.7
CDHR3-212ENST00000487084 AFF2P51816 1311 aa31.92■■■□□ 2.7
CDHR3-212ENST00000487084 TNS3Q68CZ2 1445 aa31.92■■■□□ 2.7
CDHR3-212ENST00000487084 SRPK2P78362 688 aaKnown RBP31.91■■■□□ 2.7
CDHR3-212ENST00000487084 GPRASP1Q5JY77 1395 aa31.91■■■□□ 2.7
CDHR3-212ENST00000487084 PLEKHG5O94827 1062 aa31.89■■■□□ 2.7
CDHR3-212ENST00000487084 CARD11Q9BXL7 1154 aa31.89■■■□□ 2.7
CDHR3-212ENST00000487084 SBNO1A3KN83 1393 aa31.89■■■□□ 2.7
CDHR3-212ENST00000487084 NGLY1Q96IV0 654 aa31.88■■■□□ 2.69
CDHR3-212ENST00000487084 ITSN1Q15811 1721 aa31.88■■■□□ 2.69
CDHR3-212ENST00000487084 RALGAPBQ86X10 1494 aa31.87■■■□□ 2.69
CDHR3-212ENST00000487084 CABP2Q9NPB3 220 aa31.86■■■□□ 2.69
CDHR3-212ENST00000487084 CCDC61Q9Y6R9 512 aa31.85■■■□□ 2.69
CDHR3-212ENST00000487084 ARHGEF10O15013 1369 aa31.83■■■□□ 2.69
CDHR3-212ENST00000487084 HAP1P54257 671 aaPredicted RBP31.83■■■□□ 2.69
CDHR3-212ENST00000487084 EVC2Q86UK5 1308 aa31.81■■■□□ 2.68
CDHR3-212ENST00000487084 TOPAZ1Q8N9V7 1692 aa31.81■■■□□ 2.68
CDHR3-212ENST00000487084 PAK3O75914 559 aaPredicted RBP31.81■■■□□ 2.68
CDHR3-212ENST00000487084 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
CDHR3-212ENST00000487084 CLSPNQ9HAW4 1339 aa31.78■■■□□ 2.68
CDHR3-212ENST00000487084 TRPM3Q9HCF6 1732 aaPredicted RBP31.78■■■□□ 2.68
CDHR3-212ENST00000487084 PPIP5K1Q6PFW1 1433 aa31.78■■■□□ 2.68
CDHR3-212ENST00000487084 ACEP12821 1306 aa31.77■■■□□ 2.68
CDHR3-212ENST00000487084 PLEKHG3A1L390 1219 aa31.76■■■□□ 2.67
CDHR3-212ENST00000487084 CCER1Q8TC90 406 aaPredicted RBP31.76■■■□□ 2.67
CDHR3-212ENST00000487084 USP21Q9UK80 565 aa31.76■■■□□ 2.67
CDHR3-212ENST00000487084 POLR3AO14802 1390 aaPredicted RBP31.75■■■□□ 2.67
CDHR3-212ENST00000487084 RXRBP28702 533 aa31.74■■■□□ 2.67
CDHR3-212ENST00000487084 QTRT2Q9H974 415 aaKnown RBP31.74■■■□□ 2.67
CDHR3-212ENST00000487084 ALS2Q96Q42 1657 aa31.71■■■□□ 2.67
CDHR3-212ENST00000487084 FNBP4Q8N3X1 1017 aaPredicted RBP31.71■■■□□ 2.67
CDHR3-212ENST00000487084 MARF1Q9Y4F3 1742 aaKnown RBP31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms