RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
APTX-228ENST00000486724 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
APTX-228ENST00000486724 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
APTX-228ENST00000486724 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.29
APTX-228ENST00000486724 C1QTNF8P60827 252 aa13.27□□□□□ -0.29
APTX-228ENST00000486724 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
APTX-228ENST00000486724 UTRNP46939 3433 aa13.27□□□□□ -0.29
APTX-228ENST00000486724 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
APTX-228ENST00000486724 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
APTX-228ENST00000486724 ABCC5O15440 1437 aa13.24□□□□□ -0.29
APTX-228ENST00000486724 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
APTX-228ENST00000486724 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
APTX-228ENST00000486724 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
APTX-228ENST00000486724 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
APTX-228ENST00000486724 PXDNQ92626 1479 aa13.23□□□□□ -0.29
APTX-228ENST00000486724 VPS72Q15906 364 aa13.23□□□□□ -0.29
APTX-228ENST00000486724 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
APTX-228ENST00000486724 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
APTX-228ENST00000486724 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
APTX-228ENST00000486724 METP08581 1390 aa13.22□□□□□ -0.29
APTX-228ENST00000486724 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
APTX-228ENST00000486724 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
APTX-228ENST00000486724 A0A0G2JS52 829 aa13.21□□□□□ -0.29
APTX-228ENST00000486724 MYT1Q01538 1121 aa13.21□□□□□ -0.29
APTX-228ENST00000486724 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
APTX-228ENST00000486724 ADGRL2O95490 1459 aa13.21□□□□□ -0.3
APTX-228ENST00000486724 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.3
APTX-228ENST00000486724 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
APTX-228ENST00000486724 ANKRD30AQ9BXX3 1397 aa13.2□□□□□ -0.3
APTX-228ENST00000486724 DAPK1P53355 1430 aa13.19□□□□□ -0.3
APTX-228ENST00000486724 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
APTX-228ENST00000486724 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
APTX-228ENST00000486724 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
APTX-228ENST00000486724 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
APTX-228ENST00000486724 RREB1Q92766 1687 aa13.15□□□□□ -0.3
APTX-228ENST00000486724 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
APTX-228ENST00000486724 E9PCH4 1651 aa13.15□□□□□ -0.31
APTX-228ENST00000486724 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
APTX-228ENST00000486724 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
APTX-228ENST00000486724 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
APTX-228ENST00000486724 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
APTX-228ENST00000486724 FOXO3O43524 673 aa13.13□□□□□ -0.31
APTX-228ENST00000486724 KCNQ2O43526 872 aa13.13□□□□□ -0.31
APTX-228ENST00000486724 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
APTX-228ENST00000486724 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
APTX-228ENST00000486724 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
APTX-228ENST00000486724 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
APTX-228ENST00000486724 CHD4Q14839 1912 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
APTX-228ENST00000486724 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
APTX-228ENST00000486724 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
APTX-228ENST00000486724 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
APTX-228ENST00000486724 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
APTX-228ENST00000486724 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
APTX-228ENST00000486724 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
APTX-228ENST00000486724 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
APTX-228ENST00000486724 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
APTX-228ENST00000486724 TRIM37O94972 964 aa13.07□□□□□ -0.32
APTX-228ENST00000486724 APBA3O96018 575 aa13.07□□□□□ -0.32
APTX-228ENST00000486724 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
APTX-228ENST00000486724 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
APTX-228ENST00000486724 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
APTX-228ENST00000486724 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
APTX-228ENST00000486724 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
APTX-228ENST00000486724 MYOM1P52179 1685 aa13.04□□□□□ -0.32
APTX-228ENST00000486724 LOC105371045A0A1W2PR82 267 aa13.03□□□□□ -0.32
APTX-228ENST00000486724 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
APTX-228ENST00000486724 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
APTX-228ENST00000486724 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
APTX-228ENST00000486724 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
APTX-228ENST00000486724 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
APTX-228ENST00000486724 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
APTX-228ENST00000486724 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
APTX-228ENST00000486724 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
APTX-228ENST00000486724 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
APTX-228ENST00000486724 NAIPQ13075 1403 aa13□□□□□ -0.33
APTX-228ENST00000486724 PLEKHG5O94827 1062 aa13□□□□□ -0.33
APTX-228ENST00000486724 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
APTX-228ENST00000486724 ARHGEF10O15013 1369 aa12.99□□□□□ -0.33
APTX-228ENST00000486724 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
APTX-228ENST00000486724 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
APTX-228ENST00000486724 FMN2Q9NZ56 1722 aa12.98□□□□□ -0.33
APTX-228ENST00000486724 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
APTX-228ENST00000486724 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
APTX-228ENST00000486724 PSME1Q06323 249 aa12.97□□□□□ -0.33
APTX-228ENST00000486724 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
APTX-228ENST00000486724 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
APTX-228ENST00000486724 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
APTX-228ENST00000486724 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
APTX-228ENST00000486724 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
APTX-228ENST00000486724 PTGER2P43116 358 aa12.95□□□□□ -0.34
APTX-228ENST00000486724 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
APTX-228ENST00000486724 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
APTX-228ENST00000486724 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
APTX-228ENST00000486724 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
APTX-228ENST00000486724 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms