RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
C9orf16-202ENST00000486420 POGKQ9P215 609 aa17.64■□□□□ 0.41
C9orf16-202ENST00000486420 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
C9orf16-202ENST00000486420 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
C9orf16-202ENST00000486420 COL16A1Q07092 1604 aaPredicted RBP17.63■□□□□ 0.41
C9orf16-202ENST00000486420 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
C9orf16-202ENST00000486420 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
C9orf16-202ENST00000486420 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
C9orf16-202ENST00000486420 ILDR2Q71H61 639 aa17.6■□□□□ 0.41
C9orf16-202ENST00000486420 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
C9orf16-202ENST00000486420 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
C9orf16-202ENST00000486420 CDC42BPGQ6DT37 1551 aa17.59■□□□□ 0.41
C9orf16-202ENST00000486420 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
C9orf16-202ENST00000486420 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
C9orf16-202ENST00000486420 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
C9orf16-202ENST00000486420 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.4
C9orf16-202ENST00000486420 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
C9orf16-202ENST00000486420 SHPRHQ149N8 1683 aa17.57■□□□□ 0.4
C9orf16-202ENST00000486420 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
C9orf16-202ENST00000486420 MST1RQ04912 1400 aa17.55■□□□□ 0.4
C9orf16-202ENST00000486420 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
C9orf16-202ENST00000486420 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
C9orf16-202ENST00000486420 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
C9orf16-202ENST00000486420 JCADQ9P266 1359 aa17.53■□□□□ 0.4
C9orf16-202ENST00000486420 SOCS7O14512 581 aa17.53■□□□□ 0.4
C9orf16-202ENST00000486420 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
C9orf16-202ENST00000486420 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
C9orf16-202ENST00000486420 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
C9orf16-202ENST00000486420 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
C9orf16-202ENST00000486420 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
C9orf16-202ENST00000486420 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
C9orf16-202ENST00000486420 PLEKHH1Q9ULM0 1364 aa17.49■□□□□ 0.39
C9orf16-202ENST00000486420 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
C9orf16-202ENST00000486420 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
C9orf16-202ENST00000486420 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
C9orf16-202ENST00000486420 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
C9orf16-202ENST00000486420 FMN2Q9NZ56 1722 aa17.46■□□□□ 0.39
C9orf16-202ENST00000486420 SPATA31A6Q5VVP1 1343 aa17.46■□□□□ 0.38
C9orf16-202ENST00000486420 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.38
C9orf16-202ENST00000486420 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
C9orf16-202ENST00000486420 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
C9orf16-202ENST00000486420 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
C9orf16-202ENST00000486420 KIF1AQ12756 1690 aa17.44■□□□□ 0.38
C9orf16-202ENST00000486420 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
C9orf16-202ENST00000486420 ESCO1Q5FWF5 840 aa17.43■□□□□ 0.38
C9orf16-202ENST00000486420 LRP6O75581 1613 aa17.43■□□□□ 0.38
C9orf16-202ENST00000486420 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
C9orf16-202ENST00000486420 LRRC59Q96AG4 307 aaKnown RBP17.41■□□□□ 0.38
C9orf16-202ENST00000486420 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
C9orf16-202ENST00000486420 PSME1Q06323 249 aa17.4■□□□□ 0.38
C9orf16-202ENST00000486420 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
C9orf16-202ENST00000486420 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
C9orf16-202ENST00000486420 USP47Q96K76 1375 aa17.4■□□□□ 0.38
C9orf16-202ENST00000486420 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
C9orf16-202ENST00000486420 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
C9orf16-202ENST00000486420 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
C9orf16-202ENST00000486420 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
C9orf16-202ENST00000486420 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
C9orf16-202ENST00000486420 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
C9orf16-202ENST00000486420 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
C9orf16-202ENST00000486420 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
C9orf16-202ENST00000486420 RGS17Q9UGC6 210 aaPredicted RBP17.37■□□□□ 0.37
C9orf16-202ENST00000486420 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
C9orf16-202ENST00000486420 TMF1P82094 1093 aa17.36■□□□□ 0.37
C9orf16-202ENST00000486420 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
C9orf16-202ENST00000486420 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
C9orf16-202ENST00000486420 SOS2Q07890 1332 aaPredicted RBP17.35■□□□□ 0.37
C9orf16-202ENST00000486420 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
C9orf16-202ENST00000486420 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
C9orf16-202ENST00000486420 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
C9orf16-202ENST00000486420 ATP7BP35670 1465 aa17.34■□□□□ 0.37
C9orf16-202ENST00000486420 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
C9orf16-202ENST00000486420 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
C9orf16-202ENST00000486420 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
C9orf16-202ENST00000486420 FOXO3O43524 673 aa17.32■□□□□ 0.36
C9orf16-202ENST00000486420 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
C9orf16-202ENST00000486420 RGPD8O14715 1765 aaPredicted RBP17.32■□□□□ 0.36
C9orf16-202ENST00000486420 PXDNQ92626 1479 aa17.31■□□□□ 0.36
C9orf16-202ENST00000486420 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
C9orf16-202ENST00000486420 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
C9orf16-202ENST00000486420 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
C9orf16-202ENST00000486420 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
C9orf16-202ENST00000486420 KRT28Q7Z3Y7 464 aa17.3■□□□□ 0.36
C9orf16-202ENST00000486420 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
C9orf16-202ENST00000486420 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
C9orf16-202ENST00000486420 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
C9orf16-202ENST00000486420 PRR36Q9H6K5 1346 aa17.29■□□□□ 0.36
C9orf16-202ENST00000486420 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
C9orf16-202ENST00000486420 TESK2Q96S53 571 aa17.29■□□□□ 0.36
C9orf16-202ENST00000486420 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
C9orf16-202ENST00000486420 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
C9orf16-202ENST00000486420 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
C9orf16-202ENST00000486420 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
C9orf16-202ENST00000486420 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
C9orf16-202ENST00000486420 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
C9orf16-202ENST00000486420 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
C9orf16-202ENST00000486420 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
C9orf16-202ENST00000486420 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
C9orf16-202ENST00000486420 ACEP12821 1306 aa17.25■□□□□ 0.35
C9orf16-202ENST00000486420 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms