RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 MYT1LQ9UL68 1186 aa12.23□□□□□ -0.45
RTN4-214ENST00000486085 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
RTN4-214ENST00000486085 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
RTN4-214ENST00000486085 MTMR2Q13614 643 aa12.22□□□□□ -0.45
RTN4-214ENST00000486085 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
RTN4-214ENST00000486085 FLIIQ13045 1269 aa12.21□□□□□ -0.45
RTN4-214ENST00000486085 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
RTN4-214ENST00000486085 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
RTN4-214ENST00000486085 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
RTN4-214ENST00000486085 AP1G2O75843 785 aa12.18□□□□□ -0.46
RTN4-214ENST00000486085 Q3C1V9 767 aa12.18□□□□□ -0.46
RTN4-214ENST00000486085 NR1I2O75469 434 aa12.17□□□□□ -0.46
RTN4-214ENST00000486085 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
RTN4-214ENST00000486085 COPS2P61201 443 aa12.16□□□□□ -0.46
RTN4-214ENST00000486085 TSC1Q92574 1164 aa12.16□□□□□ -0.46
RTN4-214ENST00000486085 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
RTN4-214ENST00000486085 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
RTN4-214ENST00000486085 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
RTN4-214ENST00000486085 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
RTN4-214ENST00000486085 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
RTN4-214ENST00000486085 CFAP99D6REC4 459 aa12.14□□□□□ -0.47
RTN4-214ENST00000486085 MCM6Q14566 821 aa12.14□□□□□ -0.47
RTN4-214ENST00000486085 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
RTN4-214ENST00000486085 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
RTN4-214ENST00000486085 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
RTN4-214ENST00000486085 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
RTN4-214ENST00000486085 RETREG3Q86VR2 466 aa12.12□□□□□ -0.47
RTN4-214ENST00000486085 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
RTN4-214ENST00000486085 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
RTN4-214ENST00000486085 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
RTN4-214ENST00000486085 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
RTN4-214ENST00000486085 THAP11Q96EK4 314 aa12.1□□□□□ -0.47
RTN4-214ENST00000486085 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
RTN4-214ENST00000486085 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
RTN4-214ENST00000486085 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
RTN4-214ENST00000486085 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
RTN4-214ENST00000486085 MTRQ99707 1265 aa12.09□□□□□ -0.47
RTN4-214ENST00000486085 ZPR1O75312 459 aa12.06□□□□□ -0.48
RTN4-214ENST00000486085 SPSB2Q99619 263 aa12.06□□□□□ -0.48
RTN4-214ENST00000486085 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 IL21Q9HBE4 155 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
RTN4-214ENST00000486085 TLL1O43897 1013 aa12.04□□□□□ -0.48
RTN4-214ENST00000486085 LRRN4Q8WUT4 740 aa12.04□□□□□ -0.48
RTN4-214ENST00000486085 POM121Q96HA1 1249 aa12.03□□□□□ -0.48
RTN4-214ENST00000486085 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.49
RTN4-214ENST00000486085 DESI1Q6ICB0 168 aa12.02□□□□□ -0.49
RTN4-214ENST00000486085 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
RTN4-214ENST00000486085 RAD21O60216 631 aa12.01□□□□□ -0.49
RTN4-214ENST00000486085 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
RTN4-214ENST00000486085 ADH1BP00325 375 aa12□□□□□ -0.49
RTN4-214ENST00000486085 JUNDP17535 347 aa12□□□□□ -0.49
RTN4-214ENST00000486085 APBB1O00213 710 aa11.99□□□□□ -0.49
RTN4-214ENST00000486085 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
RTN4-214ENST00000486085 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
RTN4-214ENST00000486085 LYPD8Q6UX82 237 aa11.99□□□□□ -0.49
RTN4-214ENST00000486085 PRDM9Q9NQV7 894 aa11.99□□□□□ -0.49
RTN4-214ENST00000486085 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
RTN4-214ENST00000486085 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
RTN4-214ENST00000486085 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
RTN4-214ENST00000486085 A6NJR5 290 aa11.97□□□□□ -0.49
RTN4-214ENST00000486085 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
RTN4-214ENST00000486085 PRM3Q9NNZ6 103 aa11.97□□□□□ -0.49
RTN4-214ENST00000486085 SOCS7O14512 581 aa11.96□□□□□ -0.49
RTN4-214ENST00000486085 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
RTN4-214ENST00000486085 NR6A1Q15406 480 aa11.95□□□□□ -0.5
RTN4-214ENST00000486085 EPS8L1Q8TE68 723 aa11.95□□□□□ -0.5
RTN4-214ENST00000486085 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
RTN4-214ENST00000486085 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
RTN4-214ENST00000486085 DXOO77932 396 aaKnown RBP11.94□□□□□ -0.5
RTN4-214ENST00000486085 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
RTN4-214ENST00000486085 ABL2P42684 1182 aa11.93□□□□□ -0.5
RTN4-214ENST00000486085 MMP16P51512 607 aa11.93□□□□□ -0.5
RTN4-214ENST00000486085 KCNC4Q03721 635 aa11.93□□□□□ -0.5
RTN4-214ENST00000486085 PTPRNQ16849 979 aa11.93□□□□□ -0.5
RTN4-214ENST00000486085 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
RTN4-214ENST00000486085 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
RTN4-214ENST00000486085 TRAK2O60296 914 aa11.9□□□□□ -0.5
RTN4-214ENST00000486085 S1PR4O95977 384 aa11.9□□□□□ -0.5
RTN4-214ENST00000486085 CTHP32929 405 aa11.9□□□□□ -0.5
RTN4-214ENST00000486085 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
RTN4-214ENST00000486085 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
RTN4-214ENST00000486085 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
RTN4-214ENST00000486085 CCNYL3P0C7X3 344 aa11.89□□□□□ -0.51
RTN4-214ENST00000486085 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
RTN4-214ENST00000486085 F12P00748 615 aaPredicted RBP11.88□□□□□ -0.51
RTN4-214ENST00000486085 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
RTN4-214ENST00000486085 EVA1BQ9NVM1 165 aa11.88□□□□□ -0.51
RTN4-214ENST00000486085 KCNH2Q12809 1159 aa11.86□□□□□ -0.51
RTN4-214ENST00000486085 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
RTN4-214ENST00000486085 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
RTN4-214ENST00000486085 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
RTN4-214ENST00000486085 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
RTN4-214ENST00000486085 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
RTN4-214ENST00000486085 IRF5Q13568 498 aa11.84□□□□□ -0.51
RTN4-214ENST00000486085 GPR37L1O60883 481 aa11.83□□□□□ -0.52
RTN4-214ENST00000486085 PNMA1Q8ND90 353 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms