RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MORN1Q5T089 497 aa7.34□□□□□ -1.23
RTN4-213ENST00000485749 FUT2Q10981 343 aa7.33□□□□□ -1.24
RTN4-213ENST00000485749 Q3C1V9 767 aa7.33□□□□□ -1.24
RTN4-213ENST00000485749 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
RTN4-213ENST00000485749 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
RTN4-213ENST00000485749 GCGRP47871 477 aa7.32□□□□□ -1.24
RTN4-213ENST00000485749 FOXC1Q12948 553 aa7.32□□□□□ -1.24
RTN4-213ENST00000485749 KRI1Q8N9T8 703 aaKnown RBP7.32□□□□□ -1.24
RTN4-213ENST00000485749 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
RTN4-213ENST00000485749 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
RTN4-213ENST00000485749 CTC1Q2NKJ3 1217 aa7.31□□□□□ -1.24
RTN4-213ENST00000485749 MSS51Q4VC12 460 aa7.31□□□□□ -1.24
RTN4-213ENST00000485749 KDM4CQ9H3R0 1056 aa7.31□□□□□ -1.24
RTN4-213ENST00000485749 PLA2G2CQ5R387 149 aa7.3□□□□□ -1.24
RTN4-213ENST00000485749 IL27Q8NEV9 243 aa7.3□□□□□ -1.24
RTN4-213ENST00000485749 THAP11Q96EK4 314 aa7.3□□□□□ -1.24
RTN4-213ENST00000485749 SLC27A5Q9Y2P5 690 aa7.3□□□□□ -1.24
RTN4-213ENST00000485749 TRIM66O15016 1216 aa7.29□□□□□ -1.24
RTN4-213ENST00000485749 CRIPAKQ8N1N5 446 aa7.29□□□□□ -1.24
RTN4-213ENST00000485749 GPBP1L1Q9HC44 474 aaPredicted RBP7.29□□□□□ -1.24
RTN4-213ENST00000485749 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
RTN4-213ENST00000485749 PDE4DQ08499 809 aa7.28□□□□□ -1.24
RTN4-213ENST00000485749 BRICD5Q6PL45 260 aa7.28□□□□□ -1.24
RTN4-213ENST00000485749 PKD2L1Q9P0L9 805 aa7.28□□□□□ -1.24
RTN4-213ENST00000485749 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
RTN4-213ENST00000485749 AXIN1O15169 862 aa7.27□□□□□ -1.25
RTN4-213ENST00000485749 GPR37O15354 613 aa7.27□□□□□ -1.25
RTN4-213ENST00000485749 AVPP01185 164 aa7.27□□□□□ -1.25
RTN4-213ENST00000485749 FECHP22830 423 aa7.27□□□□□ -1.25
RTN4-213ENST00000485749 REPIN1Q9BWE0 567 aaKnown RBP7.27□□□□□ -1.25
RTN4-213ENST00000485749 USP46P62068 366 aa7.26□□□□□ -1.25
RTN4-213ENST00000485749 TOR4AQ9NXH8 423 aa7.26□□□□□ -1.25
RTN4-213ENST00000485749 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
RTN4-213ENST00000485749 ST8SIA5O15466 376 aa7.24□□□□□ -1.25
RTN4-213ENST00000485749 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
RTN4-213ENST00000485749 FLIIQ13045 1269 aa7.24□□□□□ -1.25
RTN4-213ENST00000485749 MAP2K5Q13163 448 aa7.24□□□□□ -1.25
RTN4-213ENST00000485749 WNT7AO00755 349 aa7.23□□□□□ -1.25
RTN4-213ENST00000485749 KDM4AO75164 1064 aa7.23□□□□□ -1.25
RTN4-213ENST00000485749 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
RTN4-213ENST00000485749 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
RTN4-213ENST00000485749 CD46P15529 392 aa7.22□□□□□ -1.25
RTN4-213ENST00000485749 MMP16P51512 607 aa7.22□□□□□ -1.25
RTN4-213ENST00000485749 TRIM32Q13049 653 aa7.22□□□□□ -1.25
RTN4-213ENST00000485749 TREML4Q6UXN2 200 aa7.22□□□□□ -1.25
RTN4-213ENST00000485749 SNIP1Q8TAD8 396 aaKnown RBP7.22□□□□□ -1.25
RTN4-213ENST00000485749 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
RTN4-213ENST00000485749 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
RTN4-213ENST00000485749 RNF19BQ6ZMZ0 732 aa7.21□□□□□ -1.26
RTN4-213ENST00000485749 NLRP7Q8WX94 980 aa7.21□□□□□ -1.26
RTN4-213ENST00000485749 PRDM9Q9NQV7 894 aa7.21□□□□□ -1.26
RTN4-213ENST00000485749 MINK1Q8N4C8 1332 aaPredicted RBP7.21□□□□□ -1.26
RTN4-213ENST00000485749 POTECB2RU33 542 aa7.2□□□□□ -1.26
RTN4-213ENST00000485749 PHOX2BQ99453 314 aa7.2□□□□□ -1.26
RTN4-213ENST00000485749 SENP2Q9HC62 589 aa7.2□□□□□ -1.26
RTN4-213ENST00000485749 GOPCQ9HD26 462 aa7.2□□□□□ -1.26
RTN4-213ENST00000485749 IRF6O14896 467 aa7.18□□□□□ -1.26
RTN4-213ENST00000485749 DXOO77932 396 aaKnown RBP7.18□□□□□ -1.26
RTN4-213ENST00000485749 HRCP23327 699 aa7.18□□□□□ -1.26
RTN4-213ENST00000485749 CLCN1P35523 988 aa7.18□□□□□ -1.26
RTN4-213ENST00000485749 WNT7BP56706 349 aa7.18□□□□□ -1.26
RTN4-213ENST00000485749 WFS1O76024 890 aa7.17□□□□□ -1.26
RTN4-213ENST00000485749 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
RTN4-213ENST00000485749 KIFC2Q96AC6 838 aa7.17□□□□□ -1.26
RTN4-213ENST00000485749 FAM117AQ9C073 453 aa7.17□□□□□ -1.26
RTN4-213ENST00000485749 MDM2Q00987 491 aaPredicted RBP7.16□□□□□ -1.26
RTN4-213ENST00000485749 AMHR2Q16671 573 aa7.16□□□□□ -1.26
RTN4-213ENST00000485749 NUTM1Q86Y26 1132 aa7.16□□□□□ -1.26
RTN4-213ENST00000485749 C1orf115Q9H7X2 142 aa7.16□□□□□ -1.26
RTN4-213ENST00000485749 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
RTN4-213ENST00000485749 GMPR2Q9P2T1 348 aaKnown RBP7.16□□□□□ -1.26
RTN4-213ENST00000485749 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
RTN4-213ENST00000485749 A6NJR5 290 aa7.15□□□□□ -1.26
RTN4-213ENST00000485749 HOXA2O43364 376 aa7.15□□□□□ -1.26
RTN4-213ENST00000485749 INSM1Q01101 510 aaPredicted RBP7.15□□□□□ -1.26
RTN4-213ENST00000485749 MRGPRX2Q96LB1 330 aa7.15□□□□□ -1.26
RTN4-213ENST00000485749 SMPD1P17405 629 aa7.14□□□□□ -1.27
RTN4-213ENST00000485749 CCDC102AQ96A19 550 aa7.14□□□□□ -1.27
RTN4-213ENST00000485749 ATP13A2Q9NQ11 1180 aa7.14□□□□□ -1.27
RTN4-213ENST00000485749 APBB1O00213 710 aa7.13□□□□□ -1.27
RTN4-213ENST00000485749 JUNDP17535 347 aa7.13□□□□□ -1.27
RTN4-213ENST00000485749 RETREG3Q86VR2 466 aa7.13□□□□□ -1.27
RTN4-213ENST00000485749 PDIA4P13667 645 aaKnown RBP7.12□□□□□ -1.27
RTN4-213ENST00000485749 RC3H1Q5TC82 1133 aaKnown RBP7.12□□□□□ -1.27
RTN4-213ENST00000485749 ARID3AQ99856 593 aa7.12□□□□□ -1.27
RTN4-213ENST00000485749 DACH1Q9UI36 760 aa7.12□□□□□ -1.27
RTN4-213ENST00000485749 TRIM47Q96LD4 638 aa7.11□□□□□ -1.27
RTN4-213ENST00000485749 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
RTN4-213ENST00000485749 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
RTN4-213ENST00000485749 J3QL48 77 aa7.1□□□□□ -1.27
RTN4-213ENST00000485749 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
RTN4-213ENST00000485749 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
RTN4-213ENST00000485749 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
RTN4-213ENST00000485749 FAM217BQ9NTX9 383 aaPredicted RBP7.1□□□□□ -1.27
RTN4-213ENST00000485749 ALDH1A1P00352 501 aa7.09□□□□□ -1.27
RTN4-213ENST00000485749 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
RTN4-213ENST00000485749 PARP9Q8IXQ6 854 aa7.09□□□□□ -1.27
RTN4-213ENST00000485749 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
RTN4-213ENST00000485749 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
RTN4-213ENST00000485749 WIPF1O43516 503 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms