RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
SRRM1-213ENST00000485441 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
SRRM1-213ENST00000485441 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
SRRM1-213ENST00000485441 MORN1Q5T089 497 aa9.9□□□□□ -0.82
SRRM1-213ENST00000485441 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
SRRM1-213ENST00000485441 ARID3AQ99856 593 aa9.89□□□□□ -0.83
SRRM1-213ENST00000485441 TRIM34Q9BYJ4 488 aa9.89□□□□□ -0.83
SRRM1-213ENST00000485441 GPR37L1O60883 481 aa9.88□□□□□ -0.83
SRRM1-213ENST00000485441 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
SRRM1-213ENST00000485441 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.88□□□□□ -0.83
SRRM1-213ENST00000485441 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
SRRM1-213ENST00000485441 KMT5BQ4FZB7 885 aa9.87□□□□□ -0.83
SRRM1-213ENST00000485441 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
SRRM1-213ENST00000485441 HMX1Q9NP08 348 aaPredicted RBP9.87□□□□□ -0.83
SRRM1-213ENST00000485441 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
SRRM1-213ENST00000485441 SLC27A5Q9Y2P5 690 aa9.86□□□□□ -0.83
SRRM1-213ENST00000485441 ZNF330Q9Y3S2 320 aaPredicted RBP9.86□□□□□ -0.83
SRRM1-213ENST00000485441 SOWAHBA6NEL2 793 aa9.85□□□□□ -0.83
SRRM1-213ENST00000485441 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
SRRM1-213ENST00000485441 IRF5Q13568 498 aa9.85□□□□□ -0.83
SRRM1-213ENST00000485441 PUS10Q3MIT2 529 aaKnown RBP9.85□□□□□ -0.83
SRRM1-213ENST00000485441 LRRN4Q8WUT4 740 aa9.85□□□□□ -0.83
SRRM1-213ENST00000485441 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
SRRM1-213ENST00000485441 RNF40O75150 1001 aa9.84□□□□□ -0.83
SRRM1-213ENST00000485441 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
SRRM1-213ENST00000485441 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
SRRM1-213ENST00000485441 ABL2P42684 1182 aa9.82□□□□□ -0.84
SRRM1-213ENST00000485441 APLP1P51693 650 aa9.82□□□□□ -0.84
SRRM1-213ENST00000485441 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
SRRM1-213ENST00000485441 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-213ENST00000485441 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
SRRM1-213ENST00000485441 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-213ENST00000485441 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
SRRM1-213ENST00000485441 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
SRRM1-213ENST00000485441 ANKK1Q8NFD2 765 aa9.81□□□□□ -0.84
SRRM1-213ENST00000485441 EPS8L1Q8TE68 723 aa9.81□□□□□ -0.84
SRRM1-213ENST00000485441 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
SRRM1-213ENST00000485441 POM121CA8CG34 1229 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 BCAMP50895 628 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 PPP4CP60510 307 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 Q3C1V9 767 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 THAP11Q96EK4 314 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 PRR14Q9BWN1 585 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
SRRM1-213ENST00000485441 SERPINA10Q9UK55 444 aa9.8□□□□□ -0.84
SRRM1-213ENST00000485441 BLOC1S3Q6QNY0 202 aa9.79□□□□□ -0.84
SRRM1-213ENST00000485441 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
SRRM1-213ENST00000485441 SCUBE3Q8IX30 993 aa9.79□□□□□ -0.84
SRRM1-213ENST00000485441 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
SRRM1-213ENST00000485441 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
SRRM1-213ENST00000485441 TSC1Q92574 1164 aa9.77□□□□□ -0.85
SRRM1-213ENST00000485441 WNT2BQ93097 391 aa9.77□□□□□ -0.85
SRRM1-213ENST00000485441 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
SRRM1-213ENST00000485441 WWC1Q8IX03 1113 aa9.76□□□□□ -0.85
SRRM1-213ENST00000485441 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
SRRM1-213ENST00000485441 NR6A1Q15406 480 aa9.75□□□□□ -0.85
SRRM1-213ENST00000485441 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
SRRM1-213ENST00000485441 USB1Q9BQ65 265 aaKnown RBP9.75□□□□□ -0.85
SRRM1-213ENST00000485441 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
SRRM1-213ENST00000485441 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
SRRM1-213ENST00000485441 WBP1LQ9NX94 342 aa9.74□□□□□ -0.85
SRRM1-213ENST00000485441 GLMNQ92990 594 aa9.73□□□□□ -0.85
SRRM1-213ENST00000485441 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
SRRM1-213ENST00000485441 CALR3Q96L12 384 aaKnown RBP9.72□□□□□ -0.85
SRRM1-213ENST00000485441 NR1I2O75469 434 aa9.71□□□□□ -0.86
SRRM1-213ENST00000485441 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
SRRM1-213ENST00000485441 HDGFL1Q5TGJ6 251 aa9.71□□□□□ -0.86
SRRM1-213ENST00000485441 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
SRRM1-213ENST00000485441 ALG2Q9H553 416 aa9.71□□□□□ -0.86
SRRM1-213ENST00000485441 F12P00748 615 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-213ENST00000485441 VAC14Q08AM6 782 aa9.7□□□□□ -0.86
SRRM1-213ENST00000485441 FAM160A2Q8N612 972 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-213ENST00000485441 POTEMA6NI47 508 aa9.69□□□□□ -0.86
SRRM1-213ENST00000485441 JUNDP17535 347 aa9.68□□□□□ -0.86
SRRM1-213ENST00000485441 PTPRNQ16849 979 aa9.67□□□□□ -0.86
SRRM1-213ENST00000485441 MSS51Q4VC12 460 aa9.67□□□□□ -0.86
SRRM1-213ENST00000485441 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
SRRM1-213ENST00000485441 MMP16P51512 607 aa9.65□□□□□ -0.86
SRRM1-213ENST00000485441 SRPK2P78362 688 aaKnown RBP9.65□□□□□ -0.86
SRRM1-213ENST00000485441 SPSB2Q99619 263 aa9.64□□□□□ -0.87
SRRM1-213ENST00000485441 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
SRRM1-213ENST00000485441 SOX11P35716 441 aa9.63□□□□□ -0.87
SRRM1-213ENST00000485441 POTEGQ6S5H5 508 aa9.63□□□□□ -0.87
SRRM1-213ENST00000485441 NYAP1Q6ZVC0 841 aa9.63□□□□□ -0.87
SRRM1-213ENST00000485441 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
SRRM1-213ENST00000485441 MAP10Q9P2G4 905 aa9.63□□□□□ -0.87
SRRM1-213ENST00000485441 FKBPLQ9UIM3 349 aa9.63□□□□□ -0.87
SRRM1-213ENST00000485441 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
SRRM1-213ENST00000485441 COPS2P61201 443 aa9.62□□□□□ -0.87
SRRM1-213ENST00000485441 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
SRRM1-213ENST00000485441 ZPR1O75312 459 aa9.61□□□□□ -0.87
SRRM1-213ENST00000485441 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
SRRM1-213ENST00000485441 NR1H3Q13133 447 aa9.61□□□□□ -0.87
SRRM1-213ENST00000485441 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
SRRM1-213ENST00000485441 PPP1R12CQ9BZL4 782 aa9.61□□□□□ -0.87
SRRM1-213ENST00000485441 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
SRRM1-213ENST00000485441 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms