RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 EP400Q96L91 3159 aa19.85■□□□□ 0.77
UBA3-210ENST00000485424 RXRBP28702 533 aa19.84■□□□□ 0.77
UBA3-210ENST00000485424 RGS12O14924 1447 aa19.84■□□□□ 0.77
UBA3-210ENST00000485424 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
UBA3-210ENST00000485424 RPGRIP1LQ68CZ1 1315 aa19.82■□□□□ 0.76
UBA3-210ENST00000485424 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
UBA3-210ENST00000485424 KIF1AQ12756 1690 aa19.81■□□□□ 0.76
UBA3-210ENST00000485424 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
UBA3-210ENST00000485424 SOS2Q07890 1332 aaPredicted RBP19.79■□□□□ 0.76
UBA3-210ENST00000485424 PXDNQ92626 1479 aa19.79■□□□□ 0.76
UBA3-210ENST00000485424 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
UBA3-210ENST00000485424 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
UBA3-210ENST00000485424 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
UBA3-210ENST00000485424 ABCA3Q99758 1704 aa19.78■□□□□ 0.76
UBA3-210ENST00000485424 TECPR2O15040 1411 aa19.77■□□□□ 0.76
UBA3-210ENST00000485424 MYOM2P54296 1465 aa19.75■□□□□ 0.75
UBA3-210ENST00000485424 BRWD3Q6RI45 1802 aa19.75■□□□□ 0.75
UBA3-210ENST00000485424 ADAMTS2O95450 1211 aa19.74■□□□□ 0.75
UBA3-210ENST00000485424 PIK3C2GO75747 1445 aa19.74■□□□□ 0.75
UBA3-210ENST00000485424 ADGRF5Q8IZF2 1346 aa19.74■□□□□ 0.75
UBA3-210ENST00000485424 RBM6P78332 1123 aaKnown RBP19.73■□□□□ 0.75
UBA3-210ENST00000485424 QTRT2Q9H974 415 aaKnown RBP19.73■□□□□ 0.75
UBA3-210ENST00000485424 PLCH1Q4KWH8 1693 aa19.71■□□□□ 0.75
UBA3-210ENST00000485424 NGLY1Q96IV0 654 aa19.71■□□□□ 0.75
UBA3-210ENST00000485424 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
UBA3-210ENST00000485424 USP32Q8NFA0 1604 aa19.7■□□□□ 0.74
UBA3-210ENST00000485424 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
UBA3-210ENST00000485424 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
UBA3-210ENST00000485424 ATRNO75882 1429 aa19.69■□□□□ 0.74
UBA3-210ENST00000485424 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
UBA3-210ENST00000485424 NWD2Q9ULI1 1742 aa19.68■□□□□ 0.74
UBA3-210ENST00000485424 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
UBA3-210ENST00000485424 RGL3Q3MIN7 710 aa19.67■□□□□ 0.74
UBA3-210ENST00000485424 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
UBA3-210ENST00000485424 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
UBA3-210ENST00000485424 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
UBA3-210ENST00000485424 SRCAPQ6ZRS2 3230 aa19.66■□□□□ 0.74
UBA3-210ENST00000485424 USP21Q9UK80 565 aa19.66■□□□□ 0.74
UBA3-210ENST00000485424 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
UBA3-210ENST00000485424 NRXN1Q9ULB1 1477 aa19.66■□□□□ 0.74
UBA3-210ENST00000485424 STK26Q9P289 416 aa19.65■□□□□ 0.74
UBA3-210ENST00000485424 BCL9LQ86UU0 1499 aa19.65■□□□□ 0.74
UBA3-210ENST00000485424 GLI3P10071 1580 aa19.65■□□□□ 0.74
UBA3-210ENST00000485424 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.73
UBA3-210ENST00000485424 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
UBA3-210ENST00000485424 TRPM3Q9HCF6 1732 aaPredicted RBP19.63■□□□□ 0.73
UBA3-210ENST00000485424 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
UBA3-210ENST00000485424 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
UBA3-210ENST00000485424 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
UBA3-210ENST00000485424 TRPC5Q9UL62 973 aaPredicted RBP19.63■□□□□ 0.73
UBA3-210ENST00000485424 FOXO3O43524 673 aa19.62■□□□□ 0.73
UBA3-210ENST00000485424 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
UBA3-210ENST00000485424 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
UBA3-210ENST00000485424 NRAPQ86VF7 1730 aa19.6■□□□□ 0.73
UBA3-210ENST00000485424 CRYBG1Q9Y4K1 1723 aa19.6■□□□□ 0.73
UBA3-210ENST00000485424 ALS2Q96Q42 1657 aa19.59■□□□□ 0.73
UBA3-210ENST00000485424 DLC1Q96QB1 1528 aa19.59■□□□□ 0.73
UBA3-210ENST00000485424 ITSN1Q15811 1721 aa19.59■□□□□ 0.73
UBA3-210ENST00000485424 SLIT2O94813 1529 aa19.58■□□□□ 0.73
UBA3-210ENST00000485424 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.72
UBA3-210ENST00000485424 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
UBA3-210ENST00000485424 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
UBA3-210ENST00000485424 SPATA31A3Q5VYP0 1347 aa19.55■□□□□ 0.72
UBA3-210ENST00000485424 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
UBA3-210ENST00000485424 RALGAPBQ86X10 1494 aa19.54■□□□□ 0.72
UBA3-210ENST00000485424 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
UBA3-210ENST00000485424 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
UBA3-210ENST00000485424 C14orf93Q9H972 538 aaKnown RBP19.53■□□□□ 0.72
UBA3-210ENST00000485424 SIRT1Q96EB6 747 aa19.52■□□□□ 0.72
UBA3-210ENST00000485424 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
UBA3-210ENST00000485424 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
UBA3-210ENST00000485424 COL14A1Q05707 1796 aaKnown RBP19.5■□□□□ 0.71
UBA3-210ENST00000485424 GJD4Q96KN9 370 aaPredicted RBP19.5■□□□□ 0.71
UBA3-210ENST00000485424 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
UBA3-210ENST00000485424 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
UBA3-210ENST00000485424 PHF8Q9UPP1 1060 aa19.49■□□□□ 0.71
UBA3-210ENST00000485424 ANKARQ7Z5J8 1434 aa19.49■□□□□ 0.71
UBA3-210ENST00000485424 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
UBA3-210ENST00000485424 TULP4Q9NRJ4 1543 aa19.47■□□□□ 0.71
UBA3-210ENST00000485424 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
UBA3-210ENST00000485424 UNC5CLQ8IV45 518 aa19.47■□□□□ 0.71
UBA3-210ENST00000485424 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
UBA3-210ENST00000485424 PHRF1Q9P1Y6 1649 aaKnown RBP19.47■□□□□ 0.71
UBA3-210ENST00000485424 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
UBA3-210ENST00000485424 SAFB2Q14151 953 aaKnown RBP eCLIP19.46■□□□□ 0.71
UBA3-210ENST00000485424 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
UBA3-210ENST00000485424 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
UBA3-210ENST00000485424 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
UBA3-210ENST00000485424 PSME1Q06323 249 aa19.43■□□□□ 0.7
UBA3-210ENST00000485424 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
UBA3-210ENST00000485424 CCDC125Q86Z20 511 aa19.42■□□□□ 0.7
UBA3-210ENST00000485424 TNS1Q9HBL0 1735 aaKnown RBP19.42■□□□□ 0.7
UBA3-210ENST00000485424 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
UBA3-210ENST00000485424 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
UBA3-210ENST00000485424 POGKQ9P215 609 aa19.4■□□□□ 0.7
UBA3-210ENST00000485424 THSD7AQ9UPZ6 1657 aa19.4■□□□□ 0.7
UBA3-210ENST00000485424 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
UBA3-210ENST00000485424 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
UBA3-210ENST00000485424 LRP5O75197 1615 aa19.38■□□□□ 0.69
UBA3-210ENST00000485424 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms