RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 AMOTL2Q9Y2J4 779 aa20.27■□□□□ 0.84
LRIF1-202ENST00000485275 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
LRIF1-202ENST00000485275 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
LRIF1-202ENST00000485275 MINK1Q8N4C8 1332 aaPredicted RBP20.25■□□□□ 0.83
LRIF1-202ENST00000485275 KCNA6P17658 529 aa20.24■□□□□ 0.83
LRIF1-202ENST00000485275 POGKQ9P215 609 aa20.24■□□□□ 0.83
LRIF1-202ENST00000485275 ADGRB2O60241 1585 aa20.24■□□□□ 0.83
LRIF1-202ENST00000485275 SIRT1Q96EB6 747 aa20.23■□□□□ 0.83
LRIF1-202ENST00000485275 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
LRIF1-202ENST00000485275 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
LRIF1-202ENST00000485275 CABP2Q9NPB3 220 aa20.16■□□□□ 0.82
LRIF1-202ENST00000485275 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
LRIF1-202ENST00000485275 CDCA8Q53HL2 280 aa20.15■□□□□ 0.82
LRIF1-202ENST00000485275 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.82
LRIF1-202ENST00000485275 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.81
LRIF1-202ENST00000485275 CDK19Q9BWU1 502 aa20.13■□□□□ 0.81
LRIF1-202ENST00000485275 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
LRIF1-202ENST00000485275 ATP7BP35670 1465 aa20.12■□□□□ 0.81
LRIF1-202ENST00000485275 TOPAZ1Q8N9V7 1692 aa20.12■□□□□ 0.81
LRIF1-202ENST00000485275 WASLO00401 505 aaPredicted RBP20.11■□□□□ 0.81
LRIF1-202ENST00000485275 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
LRIF1-202ENST00000485275 MIER1Q8N108 512 aa20.11■□□□□ 0.81
LRIF1-202ENST00000485275 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
LRIF1-202ENST00000485275 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
LRIF1-202ENST00000485275 FMN2Q9NZ56 1722 aa20.1■□□□□ 0.81
LRIF1-202ENST00000485275 XIRP1Q702N8 1843 aaKnown RBP20.09■□□□□ 0.81
LRIF1-202ENST00000485275 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
LRIF1-202ENST00000485275 CD163L1Q9NR16 1453 aa20.09■□□□□ 0.81
LRIF1-202ENST00000485275 PANK3Q9H999 370 aa20.09■□□□□ 0.81
LRIF1-202ENST00000485275 ADGRL3Q9HAR2 1447 aa20.08■□□□□ 0.81
LRIF1-202ENST00000485275 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.81
LRIF1-202ENST00000485275 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.81
LRIF1-202ENST00000485275 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.8
LRIF1-202ENST00000485275 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.8
LRIF1-202ENST00000485275 ZNF335Q9H4Z2 1342 aaPredicted RBP20.07■□□□□ 0.8
LRIF1-202ENST00000485275 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
LRIF1-202ENST00000485275 CARD14Q9BXL6 1004 aa20.03■□□□□ 0.8
LRIF1-202ENST00000485275 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
LRIF1-202ENST00000485275 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
LRIF1-202ENST00000485275 PPIP5K1Q6PFW1 1433 aa20.03■□□□□ 0.8
LRIF1-202ENST00000485275 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
LRIF1-202ENST00000485275 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
LRIF1-202ENST00000485275 NUTM2FA1L443 756 aa20.02■□□□□ 0.8
LRIF1-202ENST00000485275 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
LRIF1-202ENST00000485275 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.79
LRIF1-202ENST00000485275 ITSN1Q15811 1721 aa20.02■□□□□ 0.79
LRIF1-202ENST00000485275 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
LRIF1-202ENST00000485275 CABP1Q9NZU7 370 aa20■□□□□ 0.79
LRIF1-202ENST00000485275 AKAP12Q02952 1782 aa20■□□□□ 0.79
LRIF1-202ENST00000485275 NSD3Q9BZ95 1437 aa19.99■□□□□ 0.79
LRIF1-202ENST00000485275 MON2Q7Z3U7 1717 aa19.99■□□□□ 0.79
LRIF1-202ENST00000485275 ANKARQ7Z5J8 1434 aa19.98■□□□□ 0.79
LRIF1-202ENST00000485275 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
LRIF1-202ENST00000485275 PRKRIP1Q9H875 184 aaPredicted RBP19.98■□□□□ 0.79
LRIF1-202ENST00000485275 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
LRIF1-202ENST00000485275 ANP32CO43423 234 aa19.97■□□□□ 0.79
LRIF1-202ENST00000485275 AMER1Q5JTC6 1135 aaPredicted RBP19.97■□□□□ 0.79
LRIF1-202ENST00000485275 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
LRIF1-202ENST00000485275 NRKQ7Z2Y5 1582 aa19.96■□□□□ 0.79
LRIF1-202ENST00000485275 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
LRIF1-202ENST00000485275 NCOA3Q9Y6Q9 1424 aa19.96■□□□□ 0.79
LRIF1-202ENST00000485275 C14orf37Q86TY3 774 aa19.94■□□□□ 0.78
LRIF1-202ENST00000485275 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
LRIF1-202ENST00000485275 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
LRIF1-202ENST00000485275 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
LRIF1-202ENST00000485275 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
LRIF1-202ENST00000485275 DCCP43146 1447 aa19.92■□□□□ 0.78
LRIF1-202ENST00000485275 C19orf44Q9H6X5 657 aa19.91■□□□□ 0.78
LRIF1-202ENST00000485275 MST1RQ04912 1400 aa19.91■□□□□ 0.78
LRIF1-202ENST00000485275 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
LRIF1-202ENST00000485275 KIF20BQ96Q89 1820 aa19.91■□□□□ 0.78
LRIF1-202ENST00000485275 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
LRIF1-202ENST00000485275 KTN1Q86UP2 1357 aaKnown RBP19.9■□□□□ 0.78
LRIF1-202ENST00000485275 TERF2IPQ9NYB0 399 aa19.9■□□□□ 0.78
LRIF1-202ENST00000485275 POLR3AO14802 1390 aaPredicted RBP19.9■□□□□ 0.78
LRIF1-202ENST00000485275 ACEP12821 1306 aa19.89■□□□□ 0.78
LRIF1-202ENST00000485275 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
LRIF1-202ENST00000485275 ANKRD26Q9UPS8 1709 aa19.89■□□□□ 0.77
LRIF1-202ENST00000485275 C1orf167Q5SNV9 1468 aa19.89■□□□□ 0.77
LRIF1-202ENST00000485275 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
LRIF1-202ENST00000485275 CCDC184Q52MB2 194 aa19.88■□□□□ 0.77
LRIF1-202ENST00000485275 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
LRIF1-202ENST00000485275 USP6P35125 1406 aa19.87■□□□□ 0.77
LRIF1-202ENST00000485275 EDC4Q6P2E9 1401 aaKnown RBP19.87■□□□□ 0.77
LRIF1-202ENST00000485275 SSH2Q76I76 1423 aa19.87■□□□□ 0.77
LRIF1-202ENST00000485275 MSH6P52701 1360 aa19.86■□□□□ 0.77
LRIF1-202ENST00000485275 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
LRIF1-202ENST00000485275 CGNL1Q0VF96 1302 aa19.84■□□□□ 0.77
LRIF1-202ENST00000485275 KIF1AQ12756 1690 aa19.83■□□□□ 0.77
LRIF1-202ENST00000485275 RALBP1Q15311 655 aa19.83■□□□□ 0.76
LRIF1-202ENST00000485275 PIK3C2AO00443 1686 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 FYB1O15117 783 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 ESCO1Q5FWF5 840 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.82■□□□□ 0.763e-7■■■■□ 23.6
LRIF1-202ENST00000485275 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 NSD2O96028 1365 aa19.82■□□□□ 0.76
LRIF1-202ENST00000485275 ATF3P18847 181 aa19.81■□□□□ 0.76
LRIF1-202ENST00000485275 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
LRIF1-202ENST00000485275 GGNBP2Q9H3C7 697 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms