RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 USP47Q96K76 1375 aa28.75■■■□□ 2.19
PKD1-218ENST00000485120 EIF4G2P78344 907 aaKnown RBP eCLIP28.74■■■□□ 2.19
PKD1-218ENST00000485120 CADPS2Q86UW7 1296 aa28.74■■■□□ 2.19
PKD1-218ENST00000485120 DCCP43146 1447 aa28.73■■■□□ 2.19
PKD1-218ENST00000485120 ATF3P18847 181 aa28.72■■■□□ 2.19
PKD1-218ENST00000485120 SAFB2Q14151 953 aaKnown RBP eCLIP28.72■■■□□ 2.19
PKD1-218ENST00000485120 SBNO2Q9Y2G9 1366 aa28.72■■■□□ 2.19
PKD1-218ENST00000485120 ST20-MTHFSA0A0A6YYL1 179 aa28.7■■■□□ 2.18
PKD1-218ENST00000485120 TOM1O60784 492 aa28.68■■■□□ 2.18
PKD1-218ENST00000485120 MINK1Q8N4C8 1332 aaPredicted RBP28.68■■■□□ 2.18
PKD1-218ENST00000485120 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
PKD1-218ENST00000485120 WASLO00401 505 aaPredicted RBP28.65■■■□□ 2.18
PKD1-218ENST00000485120 TESK2Q96S53 571 aa28.64■■■□□ 2.18
PKD1-218ENST00000485120 EVC2Q86UK5 1308 aa28.63■■■□□ 2.17
PKD1-218ENST00000485120 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
PKD1-218ENST00000485120 HIRIP3Q9BW71 556 aaPredicted RBP28.62■■■□□ 2.17
PKD1-218ENST00000485120 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.61■■■□□ 2.17
PKD1-218ENST00000485120 PUS7Q96PZ0 661 aaKnown RBP28.61■■■□□ 2.17
PKD1-218ENST00000485120 SLAIN2Q9P270 581 aa28.61■■■□□ 2.17
PKD1-218ENST00000485120 ADGRB2O60241 1585 aa28.59■■■□□ 2.17
PKD1-218ENST00000485120 CDC42BPGQ6DT37 1551 aa28.59■■■□□ 2.17
PKD1-218ENST00000485120 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
PKD1-218ENST00000485120 XIRP1Q702N8 1843 aaKnown RBP28.58■■■□□ 2.17
PKD1-218ENST00000485120 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
PKD1-218ENST00000485120 TMF1P82094 1093 aa28.57■■■□□ 2.16
PKD1-218ENST00000485120 CDCA8Q53HL2 280 aa28.56■■■□□ 2.16
PKD1-218ENST00000485120 NALCNQ8IZF0 1738 aa28.55■■■□□ 2.16
PKD1-218ENST00000485120 ANKARQ7Z5J8 1434 aa28.54■■■□□ 2.16
PKD1-218ENST00000485120 MST1RQ04912 1400 aa28.53■■■□□ 2.16
PKD1-218ENST00000485120 SRPK2P78362 688 aaKnown RBP28.53■■■□□ 2.16
PKD1-218ENST00000485120 QRICH2Q9H0J4 1663 aa28.51■■■□□ 2.16
PKD1-218ENST00000485120 CCDC61Q9Y6R9 512 aa28.51■■■□□ 2.15
PKD1-218ENST00000485120 C1orf167Q5SNV9 1468 aa28.51■■■□□ 2.15
PKD1-218ENST00000485120 NUDT16Q96DE0 195 aaKnown RBP28.5■■■□□ 2.15
PKD1-218ENST00000485120 CABP2Q9NPB3 220 aa28.48■■■□□ 2.15
PKD1-218ENST00000485120 ATAD2Q6PL18 1390 aa28.48■■■□□ 2.15
PKD1-218ENST00000485120 TULP4Q9NRJ4 1543 aa28.48■■■□□ 2.15
PKD1-218ENST00000485120 NUTM2FA1L443 756 aa28.45■■■□□ 2.14
PKD1-218ENST00000485120 ESCO1Q5FWF5 840 aa28.45■■■□□ 2.14
PKD1-218ENST00000485120 PRR36Q9H6K5 1346 aa28.44■■■□□ 2.14
PKD1-218ENST00000485120 BRINP3Q76B58 766 aa28.43■■■□□ 2.14
PKD1-218ENST00000485120 PLEKHG3A1L390 1219 aa28.42■■■□□ 2.14
PKD1-218ENST00000485120 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
PKD1-218ENST00000485120 ORAI2Q96SN7 254 aa28.42■■■□□ 2.14
PKD1-218ENST00000485120 PHF8Q9UPP1 1060 aa28.42■■■□□ 2.14
PKD1-218ENST00000485120 FMN2Q9NZ56 1722 aa28.42■■■□□ 2.14
PKD1-218ENST00000485120 DISP3Q9P2K9 1392 aa28.41■■■□□ 2.14
PKD1-218ENST00000485120 PIP4K2BP78356 416 aa28.41■■■□□ 2.14
PKD1-218ENST00000485120 ATP7BP35670 1465 aa28.4■■■□□ 2.14
PKD1-218ENST00000485120 NINLQ9Y2I6 1382 aa28.38■■■□□ 2.13
PKD1-218ENST00000485120 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
PKD1-218ENST00000485120 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
PKD1-218ENST00000485120 ILDR1Q86SU0 546 aaPredicted RBP28.34■■■□□ 2.13
PKD1-218ENST00000485120 NPHP3Q7Z494 1330 aa28.34■■■□□ 2.13
PKD1-218ENST00000485120 PPIP5K1Q6PFW1 1433 aa28.34■■■□□ 2.13
PKD1-218ENST00000485120 NGDNQ8NEJ9 315 aaKnown RBP28.33■■■□□ 2.13
PKD1-218ENST00000485120 ZNF692Q9BU19 519 aaPredicted RBP28.33■■■□□ 2.13
PKD1-218ENST00000485120 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
PKD1-218ENST00000485120 PMFBP1Q8TBY8 1022 aa28.32■■■□□ 2.12
PKD1-218ENST00000485120 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
PKD1-218ENST00000485120 FOXO3O43524 673 aa28.31■■■□□ 2.12
PKD1-218ENST00000485120 POLR3AO14802 1390 aaPredicted RBP28.31■■■□□ 2.12
PKD1-218ENST00000485120 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
PKD1-218ENST00000485120 ACEP12821 1306 aa28.29■■■□□ 2.12
PKD1-218ENST00000485120 PSME1Q06323 249 aa28.29■■■□□ 2.12
PKD1-218ENST00000485120 TERF2IPQ9NYB0 399 aa28.29■■■□□ 2.12
PKD1-218ENST00000485120 KIF7Q2M1P5 1343 aa28.28■■■□□ 2.12
PKD1-218ENST00000485120 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
PKD1-218ENST00000485120 BRD4O60885 1362 aaPredicted RBP28.27■■■□□ 2.12
PKD1-218ENST00000485120 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.11
PKD1-218ENST00000485120 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.11
PKD1-218ENST00000485120 KIF1AQ12756 1690 aa28.26■■■□□ 2.11
PKD1-218ENST00000485120 ROBO1Q9Y6N7 1651 aa28.26■■■□□ 2.11
PKD1-218ENST00000485120 KRT28Q7Z3Y7 464 aa28.25■■■□□ 2.11
PKD1-218ENST00000485120 CCDC7Q96M83 1385 aa28.24■■■□□ 2.11
PKD1-218ENST00000485120 POLR3GLQ9BT43 218 aa28.23■■■□□ 2.11
PKD1-218ENST00000485120 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
PKD1-218ENST00000485120 ITSN1Q15811 1721 aa28.23■■■□□ 2.11
PKD1-218ENST00000485120 WASHC2AQ641Q2 1341 aa28.22■■■□□ 2.11
PKD1-218ENST00000485120 LRRC59Q96AG4 307 aaKnown RBP28.22■■■□□ 2.11
PKD1-218ENST00000485120 TOPAZ1Q8N9V7 1692 aa28.22■■■□□ 2.11
PKD1-218ENST00000485120 AHDC1Q5TGY3 1603 aaPredicted RBP28.21■■■□□ 2.11
PKD1-218ENST00000485120 SBNO1A3KN83 1393 aa28.2■■■□□ 2.1
PKD1-218ENST00000485120 ANKRD36BQ8N2N9 1353 aa28.2■■■□□ 2.1
PKD1-218ENST00000485120 DDX17Q92841 729 aaKnown RBP28.19■■■□□ 2.1
PKD1-218ENST00000485120 HSPA1LP34931 641 aa28.17■■■□□ 2.1
PKD1-218ENST00000485120 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
PKD1-218ENST00000485120 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
PKD1-218ENST00000485120 USP6P35125 1406 aa28.16■■■□□ 2.1
PKD1-218ENST00000485120 PXDNQ92626 1479 aa28.15■■■□□ 2.1
PKD1-218ENST00000485120 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
PKD1-218ENST00000485120 ZNF316A6NFI3 1004 aaPredicted RBP28.15■■■□□ 2.1
PKD1-218ENST00000485120 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.1
PKD1-218ENST00000485120 A0A1W2PP64 1363 aa28.14■■■□□ 2.1
PKD1-218ENST00000485120 SPATA31A3Q5VYP0 1347 aa28.14■■■□□ 2.09
PKD1-218ENST00000485120 XPCQ01831 940 aaPredicted RBP28.13■■■□□ 2.09
PKD1-218ENST00000485120 SSH2Q76I76 1423 aa28.12■■■□□ 2.09
PKD1-218ENST00000485120 TTC21AQ8NDW8 1320 aa28.12■■■□□ 2.09
PKD1-218ENST00000485120 PANK3Q9H999 370 aa28.11■■■□□ 2.09
PKD1-218ENST00000485120 EDC4Q6P2E9 1401 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms