RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, human

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP1-213	ENST00000485112	PRAM1	Q96QH2	718 aa		32.59	■■■□□ 2.81
CLASP1-213	ENST00000485112	PLEKHH1	Q9ULM0	1364 aa		32.58	■■■□□ 2.81
CLASP1-213	ENST00000485112	NBPF8	Q3BBV2	869 aa		32.56	■■■□□ 2.8
CLASP1-213	ENST00000485112	NALCN	Q8IZF0	1738 aa		32.55	■■■□□ 2.8
CLASP1-213	ENST00000485112	ROCK2	O75116	1388 aa	Known RBP	32.54	■■■□□ 2.8
CLASP1-213	ENST00000485112	TRPM1	Q7Z4N2	1603 aa		32.51	■■■□□ 2.79
CLASP1-213	ENST00000485112	MST1R	Q04912	1400 aa		32.5	■■■□□ 2.79
CLASP1-213	ENST00000485112	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.49	■■■□□ 2.79
CLASP1-213	ENST00000485112	CDC42BPG	Q6DT37	1551 aa		32.49	■■■□□ 2.79
CLASP1-213	ENST00000485112	GPRASP1	Q5JY77	1395 aa		32.46	■■■□□ 2.79
CLASP1-213	ENST00000485112	RALGAPB	Q86X10	1494 aa		32.44	■■■□□ 2.78
CLASP1-213	ENST00000485112	HSPA1L	P34931	641 aa		32.43	■■■□□ 2.78
CLASP1-213	ENST00000485112	C1orf167	Q5SNV9	1468 aa		32.42	■■■□□ 2.78
CLASP1-213	ENST00000485112	ROBO1	Q9Y6N7	1651 aa		32.42	■■■□□ 2.78
CLASP1-213	ENST00000485112	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.42	■■■□□ 2.78
CLASP1-213	ENST00000485112	CARD11	Q9BXL7	1154 aa		32.41	■■■□□ 2.78
CLASP1-213	ENST00000485112	BRINP3	Q76B58	766 aa		32.4	■■■□□ 2.78
CLASP1-213	ENST00000485112	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.4	■■■□□ 2.78
CLASP1-213	ENST00000485112	EIF3A	Q14152	1382 aa	Known RBP	32.4	■■■□□ 2.78
CLASP1-213	ENST00000485112	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.39	■■■□□ 2.78
CLASP1-213	ENST00000485112	ADGRB2	O60241	1585 aa		32.37	■■■□□ 2.77
CLASP1-213	ENST00000485112	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.36	■■■□□ 2.77
CLASP1-213	ENST00000485112	WASL	O00401	505 aa	Predicted RBP	32.34	■■■□□ 2.77
CLASP1-213	ENST00000485112	NUTM2F	A1L443	756 aa		32.31	■■■□□ 2.76
CLASP1-213	ENST00000485112	ESCO1	Q5FWF5	840 aa		32.31	■■■□□ 2.76
CLASP1-213	ENST00000485112	ORAI2	Q96SN7	254 aa		32.31	■■■□□ 2.76
CLASP1-213	ENST00000485112	FMN2	Q9NZ56	1722 aa		32.31	■■■□□ 2.76
CLASP1-213	ENST00000485112	ANKAR	Q7Z5J8	1434 aa		32.29	■■■□□ 2.76
CLASP1-213	ENST00000485112	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.27	■■■□□ 2.76
CLASP1-213	ENST00000485112	CDK19	Q9BWU1	502 aa		32.24	■■■□□ 2.75
CLASP1-213	ENST00000485112	TULP4	Q9NRJ4	1543 aa		32.23	■■■□□ 2.75
CLASP1-213	ENST00000485112	PHLPP1	O60346	1717 aa		32.22	■■■□□ 2.75
CLASP1-213	ENST00000485112	NPHP3	Q7Z494	1330 aa		32.21	■■■□□ 2.75
CLASP1-213	ENST00000485112	QRICH2	Q9H0J4	1663 aa		32.21	■■■□□ 2.75
CLASP1-213	ENST00000485112	PHF8	Q9UPP1	1060 aa		32.2	■■■□□ 2.75
CLASP1-213	ENST00000485112	SBNO2	Q9Y2G9	1366 aa		32.19	■■■□□ 2.74
CLASP1-213	ENST00000485112	EVC2	Q86UK5	1308 aa		32.19	■■■□□ 2.74
CLASP1-213	ENST00000485112	NHSL1	Q5SYE7	1610 aa		32.18	■■■□□ 2.74
CLASP1-213	ENST00000485112	SRPK2	P78362	688 aa	Known RBP	32.17	■■■□□ 2.74
CLASP1-213	ENST00000485112	NUDT16	Q96DE0	195 aa	Known RBP	32.17	■■■□□ 2.74
CLASP1-213	ENST00000485112	PRR36	Q9H6K5	1346 aa		32.17	■■■□□ 2.74
CLASP1-213	ENST00000485112	FOXO3	O43524	673 aa		32.16	■■■□□ 2.74
CLASP1-213	ENST00000485112	SLC24A1	O60721	1099 aa		32.16	■■■□□ 2.74
CLASP1-213	ENST00000485112	LRRC59	Q96AG4	307 aa	Known RBP	32.16	■■■□□ 2.74
CLASP1-213	ENST00000485112	COL16A1	Q07092	1604 aa	Predicted RBP	32.15	■■■□□ 2.74
CLASP1-213	ENST00000485112	KIF1A	Q12756	1690 aa		32.15	■■■□□ 2.74
CLASP1-213	ENST00000485112	DDX17	Q92841	729 aa	Known RBP	32.15	■■■□□ 2.74
CLASP1-213	ENST00000485112	SOS2	Q07890	1332 aa	Predicted RBP	32.15	■■■□□ 2.74
CLASP1-213	ENST00000485112	JCAD	Q9P266	1359 aa		32.15	■■■□□ 2.74
CLASP1-213	ENST00000485112	USP32	Q8NFA0	1604 aa		32.13	■■■□□ 2.73
CLASP1-213	ENST00000485112	CCDC61	Q9Y6R9	512 aa		32.13	■■■□□ 2.73
CLASP1-213	ENST00000485112	ATP7B	P35670	1465 aa		32.12	■■■□□ 2.73
CLASP1-213	ENST00000485112	USP47	Q96K76	1375 aa		32.12	■■■□□ 2.73
CLASP1-213	ENST00000485112	ST20-MTHFS	A0A0A6YYL1	179 aa		32.11	■■■□□ 2.73
CLASP1-213	ENST00000485112	CABP2	Q9NPB3	220 aa		32.1	■■■□□ 2.73
CLASP1-213	ENST00000485112	PMFBP1	Q8TBY8	1022 aa		32.09	■■■□□ 2.73
CLASP1-213	ENST00000485112	PSME1	Q06323	249 aa		32.07	■■■□□ 2.72
CLASP1-213	ENST00000485112	KRT28	Q7Z3Y7	464 aa		32.06	■■■□□ 2.72
CLASP1-213	ENST00000485112	RGPD8	O14715	1765 aa	Predicted RBP	32.06	■■■□□ 2.72
CLASP1-213	ENST00000485112	PXDN	Q92626	1479 aa		32.05	■■■□□ 2.72
CLASP1-213	ENST00000485112	NGDN	Q8NEJ9	315 aa	Known RBP	32.05	■■■□□ 2.72
CLASP1-213	ENST00000485112	PLEKHG3	A1L390	1219 aa		32.04	■■■□□ 2.72
CLASP1-213	ENST00000485112	ITSN1	Q15811	1721 aa		32.03	■■■□□ 2.72
CLASP1-213	ENST00000485112	XPC	Q01831	940 aa	Predicted RBP	32.03	■■■□□ 2.72
CLASP1-213	ENST00000485112	TESK2	Q96S53	571 aa		32.03	■■■□□ 2.72
CLASP1-213	ENST00000485112	SPATA31A6	Q5VVP1	1343 aa		32.02	■■■□□ 2.72
CLASP1-213	ENST00000485112	ATAD2	Q6PL18	1390 aa		32.02	■■■□□ 2.72
CLASP1-213	ENST00000485112	PUS7	Q96PZ0	661 aa	Known RBP	32.01	■■■□□ 2.71
CLASP1-213	ENST00000485112	PPIP5K1	Q6PFW1	1433 aa		32	■■■□□ 2.71
CLASP1-213	ENST00000485112	SBNO1	A3KN83	1393 aa		31.98	■■■□□ 2.71
CLASP1-213	ENST00000485112	PNPLA6	Q8IY17	1366 aa		31.98	■■■□□ 2.71
CLASP1-213	ENST00000485112	POLR3A	O14802	1390 aa	Predicted RBP	31.97	■■■□□ 2.71
CLASP1-213	ENST00000485112	SHPRH	Q149N8	1683 aa		31.97	■■■□□ 2.71
CLASP1-213	ENST00000485112	TOPAZ1	Q8N9V7	1692 aa		31.97	■■■□□ 2.71
CLASP1-213	ENST00000485112	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.97	■■■□□ 2.71
CLASP1-213	ENST00000485112	TMF1	P82094	1093 aa		31.97	■■■□□ 2.71
CLASP1-213	ENST00000485112	CABP1	Q9NZU7	370 aa		31.96	■■■□□ 2.71
CLASP1-213	ENST00000485112	ACE	P12821	1306 aa		31.96	■■■□□ 2.71
CLASP1-213	ENST00000485112	SPATA31A3	Q5VYP0	1347 aa		31.96	■■■□□ 2.71
CLASP1-213	ENST00000485112	TNS3	Q68CZ2	1445 aa		31.92	■■■□□ 2.7
CLASP1-213	ENST00000485112	CDCA8	Q53HL2	280 aa		31.92	■■■□□ 2.7
CLASP1-213	ENST00000485112	MED1	Q15648	1581 aa	Predicted RBP	31.9	■■■□□ 2.7
CLASP1-213	ENST00000485112	ARHGEF10	O15013	1369 aa		31.9	■■■□□ 2.7
CLASP1-213	ENST00000485112	BRD4	O60885	1362 aa	Predicted RBP	31.88	■■■□□ 2.69
CLASP1-213	ENST00000485112	HSPA5	P11021	654 aa	Known RBP	31.87	■■■□□ 2.69
CLASP1-213	ENST00000485112	ZNF692	Q9BU19	519 aa	Predicted RBP	31.87	■■■□□ 2.69
CLASP1-213	ENST00000485112	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.86	■■■□□ 2.69
CLASP1-213	ENST00000485112	NUTM2E	B1AL46	878 aa	Predicted RBP	31.86	■■■□□ 2.69
CLASP1-213	ENST00000485112	PAK3	O75914	559 aa	Predicted RBP	31.86	■■■□□ 2.69
CLASP1-213	ENST00000485112	LMOD2	Q6P5Q4	547 aa		31.86	■■■□□ 2.69
CLASP1-213	ENST00000485112	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.86	■■■□□ 2.69
CLASP1-213	ENST00000485112	DISP3	Q9P2K9	1392 aa		31.84	■■■□□ 2.69
CLASP1-213	ENST00000485112	NINL	Q9Y2I6	1382 aa		31.84	■■■□□ 2.69
CLASP1-213	ENST00000485112	TMC1	Q8TDI8	760 aa		31.84	■■■□□ 2.69
CLASP1-213	ENST00000485112	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.84	■■■□□ 2.69
CLASP1-213	ENST00000485112	MEX3C	Q5U5Q3	659 aa	Known RBP	31.83	■■■□□ 2.69
CLASP1-213	ENST00000485112	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.81	■■■□□ 2.68
CLASP1-213	ENST00000485112	PHF23	Q9BUL5	403 aa	Predicted RBP	31.81	■■■□□ 2.68
CLASP1-213	ENST00000485112	LRP6	O75581	1613 aa		31.8	■■■□□ 2.68
CLASP1-213	ENST00000485112	USP6	P35125	1406 aa		31.8	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 126 ms