RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
SREBF1-213ENST00000485080 PRAM1Q96QH2 718 aa25.54■■□□□ 1.68
SREBF1-213ENST00000485080 NBPF1Q3BBV0 1214 aa25.53■■□□□ 1.68
SREBF1-213ENST00000485080 TRAK1Q9UPV9 953 aa25.53■■□□□ 1.68
SREBF1-213ENST00000485080 TIMELESSQ9UNS1 1208 aa25.51■■□□□ 1.67
SREBF1-213ENST00000485080 POGKQ9P215 609 aa25.5■■□□□ 1.67
SREBF1-213ENST00000485080 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
SREBF1-213ENST00000485080 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
SREBF1-213ENST00000485080 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
SREBF1-213ENST00000485080 BRINP3Q76B58 766 aa25.48■■□□□ 1.67
SREBF1-213ENST00000485080 ARHGEF28Q8N1W1 1705 aaKnown RBP25.46■■□□□ 1.67
SREBF1-213ENST00000485080 GPRASP1Q5JY77 1395 aa25.46■■□□□ 1.67
SREBF1-213ENST00000485080 ADGRB2O60241 1585 aa25.46■■□□□ 1.67
SREBF1-213ENST00000485080 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-213ENST00000485080 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
SREBF1-213ENST00000485080 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
SREBF1-213ENST00000485080 ROCK2O75116 1388 aaKnown RBP25.42■■□□□ 1.66
SREBF1-213ENST00000485080 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
SREBF1-213ENST00000485080 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
SREBF1-213ENST00000485080 ANKARQ7Z5J8 1434 aa25.37■■□□□ 1.65
SREBF1-213ENST00000485080 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
SREBF1-213ENST00000485080 ORAI2Q96SN7 254 aa25.37■■□□□ 1.65
SREBF1-213ENST00000485080 PHLPP1O60346 1717 aa25.37■■□□□ 1.65
SREBF1-213ENST00000485080 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-213ENST00000485080 EIF3AQ14152 1382 aaKnown RBP25.36■■□□□ 1.65
SREBF1-213ENST00000485080 WASLO00401 505 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-213ENST00000485080 MINK1Q8N4C8 1332 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-213ENST00000485080 CENPJQ9HC77 1338 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-213ENST00000485080 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
SREBF1-213ENST00000485080 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-213ENST00000485080 CARD11Q9BXL7 1154 aa25.31■■□□□ 1.64
SREBF1-213ENST00000485080 TULP4Q9NRJ4 1543 aa25.31■■□□□ 1.64
SREBF1-213ENST00000485080 SOS2Q07890 1332 aaPredicted RBP25.31■■□□□ 1.64
SREBF1-213ENST00000485080 JCADQ9P266 1359 aa25.31■■□□□ 1.64
SREBF1-213ENST00000485080 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
SREBF1-213ENST00000485080 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
SREBF1-213ENST00000485080 USP32Q8NFA0 1604 aa25.28■■□□□ 1.64
SREBF1-213ENST00000485080 KIF1AQ12756 1690 aa25.28■■□□□ 1.64
SREBF1-213ENST00000485080 LRRC59Q96AG4 307 aaKnown RBP25.27■■□□□ 1.64
SREBF1-213ENST00000485080 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
SREBF1-213ENST00000485080 PHF8Q9UPP1 1060 aa25.26■■□□□ 1.63
SREBF1-213ENST00000485080 PRR36Q9H6K5 1346 aa25.26■■□□□ 1.63
SREBF1-213ENST00000485080 SBNO2Q9Y2G9 1366 aa25.26■■□□□ 1.63
SREBF1-213ENST00000485080 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
SREBF1-213ENST00000485080 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
SREBF1-213ENST00000485080 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
SREBF1-213ENST00000485080 ATP7BP35670 1465 aa25.23■■□□□ 1.63
SREBF1-213ENST00000485080 PXDNQ92626 1479 aa25.23■■□□□ 1.63
SREBF1-213ENST00000485080 FOXO3O43524 673 aa25.23■■□□□ 1.63
SREBF1-213ENST00000485080 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
SREBF1-213ENST00000485080 NUDT16Q96DE0 195 aaKnown RBP25.22■■□□□ 1.63
SREBF1-213ENST00000485080 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
SREBF1-213ENST00000485080 CCDC61Q9Y6R9 512 aa25.2■■□□□ 1.62
SREBF1-213ENST00000485080 MED1Q15648 1581 aaPredicted RBP25.18■■□□□ 1.62
SREBF1-213ENST00000485080 EVC2Q86UK5 1308 aa25.18■■□□□ 1.62
SREBF1-213ENST00000485080 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
SREBF1-213ENST00000485080 PNPLA6Q8IY17 1366 aa25.17■■□□□ 1.62
SREBF1-213ENST00000485080 PLEKHG3A1L390 1219 aa25.16■■□□□ 1.62
SREBF1-213ENST00000485080 SLC24A1O60721 1099 aa25.15■■□□□ 1.62
SREBF1-213ENST00000485080 KRT28Q7Z3Y7 464 aa25.15■■□□□ 1.62
SREBF1-213ENST00000485080 TOPAZ1Q8N9V7 1692 aa25.15■■□□□ 1.62
SREBF1-213ENST00000485080 SRPK2P78362 688 aaKnown RBP25.14■■□□□ 1.62
SREBF1-213ENST00000485080 PSME1Q06323 249 aa25.14■■□□□ 1.62
SREBF1-213ENST00000485080 PMFBP1Q8TBY8 1022 aa25.14■■□□□ 1.62
SREBF1-213ENST00000485080 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
SREBF1-213ENST00000485080 POLR3AO14802 1390 aaPredicted RBP25.13■■□□□ 1.61
SREBF1-213ENST00000485080 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
SREBF1-213ENST00000485080 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
SREBF1-213ENST00000485080 USP47Q96K76 1375 aa25.11■■□□□ 1.61
SREBF1-213ENST00000485080 XPCQ01831 940 aaPredicted RBP25.11■■□□□ 1.61
SREBF1-213ENST00000485080 PUS7Q96PZ0 661 aaKnown RBP25.11■■□□□ 1.61
SREBF1-213ENST00000485080 TESK2Q96S53 571 aa25.11■■□□□ 1.61
SREBF1-213ENST00000485080 ST20-MTHFSA0A0A6YYL1 179 aa25.1■■□□□ 1.61
SREBF1-213ENST00000485080 NGDNQ8NEJ9 315 aaKnown RBP25.1■■□□□ 1.61
SREBF1-213ENST00000485080 COL22A1Q8NFW1 1626 aaPredicted RBP25.1■■□□□ 1.61
SREBF1-213ENST00000485080 DISP3Q9P2K9 1392 aa25.08■■□□□ 1.61
SREBF1-213ENST00000485080 TNS3Q68CZ2 1445 aa25.08■■□□□ 1.61
SREBF1-213ENST00000485080 ATAD2Q6PL18 1390 aa25.07■■□□□ 1.6
SREBF1-213ENST00000485080 PPIP5K1Q6PFW1 1433 aa25.07■■□□□ 1.6
SREBF1-213ENST00000485080 LRP6O75581 1613 aa25.07■■□□□ 1.6
SREBF1-213ENST00000485080 ACEP12821 1306 aa25.06■■□□□ 1.6
SREBF1-213ENST00000485080 TRPM3Q9HCF6 1732 aaPredicted RBP25.05■■□□□ 1.6
SREBF1-213ENST00000485080 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
SREBF1-213ENST00000485080 BRD4O60885 1362 aaPredicted RBP25.04■■□□□ 1.6
SREBF1-213ENST00000485080 CABP1Q9NZU7 370 aa25.03■■□□□ 1.6
SREBF1-213ENST00000485080 ALS2Q96Q42 1657 aa25■■□□□ 1.59
SREBF1-213ENST00000485080 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
SREBF1-213ENST00000485080 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-213ENST00000485080 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-213ENST00000485080 NUTM2AQ8IVF1 878 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-213ENST00000485080 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-213ENST00000485080 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
SREBF1-213ENST00000485080 TMF1P82094 1093 aa24.96■■□□□ 1.59
SREBF1-213ENST00000485080 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.59
SREBF1-213ENST00000485080 MEX3CQ5U5Q3 659 aaKnown RBP24.95■■□□□ 1.58
SREBF1-213ENST00000485080 USP6P35125 1406 aa24.95■■□□□ 1.58
SREBF1-213ENST00000485080 SSH2Q76I76 1423 aa24.95■■□□□ 1.58
SREBF1-213ENST00000485080 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
SREBF1-213ENST00000485080 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
SREBF1-213ENST00000485080 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms