RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.97■■■□□ 2.07
DDR1-245ENST00000484556 SPHKAPQ2M3C7 1700 aa27.96■■■□□ 2.07
DDR1-245ENST00000484556 NEXMIFQ5QGS0 1516 aa27.93■■■□□ 2.06
DDR1-245ENST00000484556 RALGAPBQ86X10 1494 aa27.93■■■□□ 2.06
DDR1-245ENST00000484556 ROBO2Q9HCK4 1378 aa27.91■■■□□ 2.06
DDR1-245ENST00000484556 PXDNQ92626 1479 aa27.9■■■□□ 2.06
DDR1-245ENST00000484556 NUP155O75694 1391 aa27.9■■■□□ 2.06
DDR1-245ENST00000484556 PSDA5PKW4 1024 aaPredicted RBP27.88■■■□□ 2.05
DDR1-245ENST00000484556 XPCQ01831 940 aaPredicted RBP27.88■■■□□ 2.05
DDR1-245ENST00000484556 SF3B2Q13435 895 aaKnown RBP27.88■■■□□ 2.05
DDR1-245ENST00000484556 NPHP3Q7Z494 1330 aa27.85■■■□□ 2.05
DDR1-245ENST00000484556 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
DDR1-245ENST00000484556 SLIT2O94813 1529 aa27.83■■■□□ 2.05
DDR1-245ENST00000484556 UNC5CLQ8IV45 518 aa27.83■■■□□ 2.05
DDR1-245ENST00000484556 ESCO1Q5FWF5 840 aa27.82■■■□□ 2.04
DDR1-245ENST00000484556 HRCP23327 699 aa27.8■■■□□ 2.04
DDR1-245ENST00000484556 SEPT12Q8IYM1 358 aa27.79■■■□□ 2.04
DDR1-245ENST00000484556 CDC42BPGQ6DT37 1551 aa27.78■■■□□ 2.04
DDR1-245ENST00000484556 FOXO3O43524 673 aa27.78■■■□□ 2.04
DDR1-245ENST00000484556 USP32Q8NFA0 1604 aa27.77■■■□□ 2.04
DDR1-245ENST00000484556 KIF1BO60333 1816 aa27.76■■■□□ 2.04
DDR1-245ENST00000484556 ROCK1Q13464 1354 aa27.76■■■□□ 2.03
DDR1-245ENST00000484556 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
DDR1-245ENST00000484556 PRAG1Q86YV5 1406 aa27.75■■■□□ 2.03
DDR1-245ENST00000484556 PLCH1Q4KWH8 1693 aa27.72■■■□□ 2.03
DDR1-245ENST00000484556 NUTM2FA1L443 756 aa27.71■■■□□ 2.03
DDR1-245ENST00000484556 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
DDR1-245ENST00000484556 BAG6P46379 1132 aa27.69■■■□□ 2.02
DDR1-245ENST00000484556 CCDC9Q9Y3X0 531 aaKnown RBP27.68■■■□□ 2.02
DDR1-245ENST00000484556 LRPPRCP42704 1394 aaKnown RBP27.67■■■□□ 2.02
DDR1-245ENST00000484556 VPS72Q15906 364 aa27.66■■■□□ 2.02
DDR1-245ENST00000484556 NWD2Q9ULI1 1742 aa27.66■■■□□ 2.02
DDR1-245ENST00000484556 SPATA31A3Q5VYP0 1347 aa27.66■■■□□ 2.02
DDR1-245ENST00000484556 NAIPQ13075 1403 aa27.65■■■□□ 2.02
DDR1-245ENST00000484556 PLEKHG5O94827 1062 aa27.64■■■□□ 2.02
DDR1-245ENST00000484556 R3HDM1Q15032 1099 aaKnown RBP27.64■■■□□ 2.02
DDR1-245ENST00000484556 A0A0G2JS52 829 aa27.63■■■□□ 2.01
DDR1-245ENST00000484556 ITGAEP38570 1179 aa27.63■■■□□ 2.01
DDR1-245ENST00000484556 MYT1Q01538 1121 aa27.63■■■□□ 2.01
DDR1-245ENST00000484556 RGPD1P0DJD0 1748 aa27.62■■■□□ 2.01
DDR1-245ENST00000484556 VGFO15240 615 aaPredicted RBP27.62■■■□□ 2.01
DDR1-245ENST00000484556 HAP1P54257 671 aaPredicted RBP27.62■■■□□ 2.01
DDR1-245ENST00000484556 EN1Q05925 392 aaPredicted RBP27.62■■■□□ 2.01
DDR1-245ENST00000484556 ABCA3Q99758 1704 aa27.61■■■□□ 2.01
DDR1-245ENST00000484556 ONECUT3O60422 494 aaPredicted RBP27.61■■■□□ 2.01
DDR1-245ENST00000484556 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
DDR1-245ENST00000484556 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
DDR1-245ENST00000484556 PPLO60437 1756 aa27.6■■■□□ 2.01
DDR1-245ENST00000484556 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
DDR1-245ENST00000484556 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
DDR1-245ENST00000484556 YY1P25490 414 aa27.57■■■□□ 2
DDR1-245ENST00000484556 KRT28Q7Z3Y7 464 aa27.55■■■□□ 2
DDR1-245ENST00000484556 WAPLQ7Z5K2 1190 aa27.55■■■□□ 2
DDR1-245ENST00000484556 TNS3Q68CZ2 1445 aa27.55■■■□□ 2
DDR1-245ENST00000484556 TNS1Q9HBL0 1735 aaKnown RBP27.55■■■□□ 2
DDR1-245ENST00000484556 FAM182BQ5T319 152 aa27.54■■■□□ 2
DDR1-245ENST00000484556 NRAPQ86VF7 1730 aa27.54■■■□□ 2
DDR1-245ENST00000484556 FAM98CQ17RN3 349 aaKnown RBP27.53■■■□□ 2
DDR1-245ENST00000484556 STK26Q9P289 416 aa27.52■■■□□ 2
DDR1-245ENST00000484556 RGPD8O14715 1765 aaPredicted RBP27.52■■■□□ 2
DDR1-245ENST00000484556 PLEKHH1Q9ULM0 1364 aa27.51■■□□□ 1.99
DDR1-245ENST00000484556 EZH2Q15910 746 aaKnown RBP27.47■■□□□ 1.99
DDR1-245ENST00000484556 TECPR2O15040 1411 aa27.47■■□□□ 1.99
DDR1-245ENST00000484556 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
DDR1-245ENST00000484556 RPGRIP1LQ68CZ1 1315 aa27.46■■□□□ 1.99
DDR1-245ENST00000484556 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
DDR1-245ENST00000484556 DISP2A7MBM2 1401 aa27.46■■□□□ 1.99
DDR1-245ENST00000484556 KNDC1Q76NI1 1749 aa27.46■■□□□ 1.99
DDR1-245ENST00000484556 FAM83GA6ND36 823 aa27.45■■□□□ 1.98
DDR1-245ENST00000484556 ADGRB2O60241 1585 aa27.41■■□□□ 1.98
DDR1-245ENST00000484556 THSD7AQ9UPZ6 1657 aa27.4■■□□□ 1.98
DDR1-245ENST00000484556 PSME1Q06323 249 aa27.4■■□□□ 1.98
DDR1-245ENST00000484556 BTG4Q9NY30 223 aa27.4■■□□□ 1.98
DDR1-245ENST00000484556 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
DDR1-245ENST00000484556 ADGRF5Q8IZF2 1346 aa27.4■■□□□ 1.98
DDR1-245ENST00000484556 SBNO1A3KN83 1393 aa27.38■■□□□ 1.97
DDR1-245ENST00000484556 COL14A1Q05707 1796 aaKnown RBP27.37■■□□□ 1.97
DDR1-245ENST00000484556 ARHGEF10O15013 1369 aa27.37■■□□□ 1.97
DDR1-245ENST00000484556 TMEM132EQ6IEE7 984 aa27.37■■□□□ 1.97
DDR1-245ENST00000484556 NRXN1Q9ULB1 1477 aa27.37■■□□□ 1.97
DDR1-245ENST00000484556 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
DDR1-245ENST00000484556 RRBP1Q9P2E9 1410 aaKnown RBP27.35■■□□□ 1.97
DDR1-245ENST00000484556 CAMKK2Q96RR4 588 aa27.35■■□□□ 1.97
DDR1-245ENST00000484556 RREB1Q92766 1687 aa27.34■■□□□ 1.97
DDR1-245ENST00000484556 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
DDR1-245ENST00000484556 TRIM37O94972 964 aa27.32■■□□□ 1.96
DDR1-245ENST00000484556 SPATA31A5Q5VU36 1347 aa27.32■■□□□ 1.96
DDR1-245ENST00000484556 SPATA31A7Q8IWB4 1347 aa27.32■■□□□ 1.96
DDR1-245ENST00000484556 CAMTA1Q9Y6Y1 1673 aa27.3■■□□□ 1.96
DDR1-245ENST00000484556 TRPM3Q9HCF6 1732 aaPredicted RBP27.3■■□□□ 1.96
DDR1-245ENST00000484556 YTHDC2Q9H6S0 1430 aaKnown RBP27.29■■□□□ 1.96
DDR1-245ENST00000484556 APBA3O96018 575 aa27.27■■□□□ 1.96
DDR1-245ENST00000484556 PMFBP1Q8TBY8 1022 aa27.27■■□□□ 1.96
DDR1-245ENST00000484556 PPP1R1BQ9UD71 204 aaPredicted RBP27.27■■□□□ 1.96
DDR1-245ENST00000484556 ALS2Q96Q42 1657 aa27.27■■□□□ 1.96
DDR1-245ENST00000484556 PARD3Q8TEW0 1356 aa27.25■■□□□ 1.95
DDR1-245ENST00000484556 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
DDR1-245ENST00000484556 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
DDR1-245ENST00000484556 PIK3C2GO75747 1445 aa27.23■■□□□ 1.95
DDR1-245ENST00000484556 DCAF8L1A6NGE4 600 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms