RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 LAMC1P11047 1609 aa41.87■■■■■ 4.29
HLA-C-207ENST00000484378 ORAI2Q96SN7 254 aa41.87■■■■■ 4.29
HLA-C-207ENST00000484378 ABCC11Q96J66 1382 aa41.87■■■■■ 4.29
HLA-C-207ENST00000484378 YTHDC2Q9H6S0 1430 aaKnown RBP41.84■■■■■ 4.29
HLA-C-207ENST00000484378 NRXN1Q9ULB1 1477 aa41.84■■■■■ 4.29
HLA-C-207ENST00000484378 WAPLQ7Z5K2 1190 aa41.83■■■■■ 4.29
HLA-C-207ENST00000484378 PNPLA6Q8IY17 1366 aa41.83■■■■■ 4.29
HLA-C-207ENST00000484378 ZNF772Q68DY9 489 aaPredicted RBP41.81■■■■■ 4.28
HLA-C-207ENST00000484378 PLEKHH1Q9ULM0 1364 aa41.78■■■■■ 4.28
HLA-C-207ENST00000484378 C14orf93Q9H972 538 aaKnown RBP41.78■■■■■ 4.28
HLA-C-207ENST00000484378 SOS2Q07890 1332 aaPredicted RBP41.76■■■■■ 4.28
HLA-C-207ENST00000484378 ESCO1Q5FWF5 840 aa41.74■■■■■ 4.27
HLA-C-207ENST00000484378 CFAP70Q5T0N1 1121 aa41.74■■■■■ 4.27
HLA-C-207ENST00000484378 HRCP23327 699 aa41.73■■■■■ 4.27
HLA-C-207ENST00000484378 DHX57Q6P158 1386 aaKnown RBP41.71■■■■■ 4.27
HLA-C-207ENST00000484378 NPHP3Q7Z494 1330 aa41.69■■■■■ 4.26
HLA-C-207ENST00000484378 NUTM2FA1L443 756 aa41.68■■■■■ 4.26
HLA-C-207ENST00000484378 AFF2P51816 1311 aa41.68■■■■■ 4.26
HLA-C-207ENST00000484378 FMN2Q9NZ56 1722 aa41.67■■■■■ 4.26
HLA-C-207ENST00000484378 SIRT1Q96EB6 747 aa41.66■■■■■ 4.26
HLA-C-207ENST00000484378 C8orf37Q96NL8 207 aa41.65■■■■■ 4.26
HLA-C-207ENST00000484378 PXDNQ92626 1479 aa41.61■■■■■ 4.25
HLA-C-207ENST00000484378 FOXO3O43524 673 aa41.59■■■■■ 4.25
HLA-C-207ENST00000484378 ADAMTS2O95450 1211 aa41.59■■■■■ 4.25
HLA-C-207ENST00000484378 COL22A1Q8NFW1 1626 aaPredicted RBP41.58■■■■■ 4.25
HLA-C-207ENST00000484378 RXRBP28702 533 aa41.57■■■■■ 4.25
HLA-C-207ENST00000484378 DCAF11Q8TEB1 546 aa41.57■■■■■ 4.25
HLA-C-207ENST00000484378 PRAM1Q96QH2 718 aa41.57■■■■■ 4.25
HLA-C-207ENST00000484378 KDM2AQ9Y2K7 1162 aa41.57■■■■■ 4.25
HLA-C-207ENST00000484378 DLC1Q96QB1 1528 aa41.57■■■■■ 4.25
HLA-C-207ENST00000484378 KIF1AQ12756 1690 aa41.56■■■■■ 4.24
HLA-C-207ENST00000484378 ADGRB1O14514 1584 aa41.56■■■■■ 4.24
HLA-C-207ENST00000484378 XPCQ01831 940 aaPredicted RBP41.56■■■■■ 4.24
HLA-C-207ENST00000484378 SAFB2Q14151 953 aaKnown RBP eCLIP41.54■■■■■ 4.24
HLA-C-207ENST00000484378 NGLY1Q96IV0 654 aa41.52■■■■■ 4.24
HLA-C-207ENST00000484378 POGKQ9P215 609 aa41.51■■■■■ 4.24
HLA-C-207ENST00000484378 STAC3Q96MF2 364 aa41.49■■■■■ 4.23
HLA-C-207ENST00000484378 CDK12Q9NYV4 1490 aaPredicted RBP41.48■■■■■ 4.23
HLA-C-207ENST00000484378 RGPD8O14715 1765 aaPredicted RBP41.45■■■■■ 4.23
HLA-C-207ENST00000484378 TRAK1Q9UPV9 953 aa41.45■■■■■ 4.23
HLA-C-207ENST00000484378 QTRT2Q9H974 415 aaKnown RBP41.44■■■■■ 4.22
HLA-C-207ENST00000484378 ADGRB2O60241 1585 aa41.43■■■■■ 4.22
HLA-C-207ENST00000484378 PHF8Q9UPP1 1060 aa41.41■■■■■ 4.22
HLA-C-207ENST00000484378 RBM6P78332 1123 aaKnown RBP41.39■■■■■ 4.22
HLA-C-207ENST00000484378 KRT28Q7Z3Y7 464 aa41.37■■■■■ 4.21
HLA-C-207ENST00000484378 USP21Q9UK80 565 aa41.37■■■■■ 4.21
HLA-C-207ENST00000484378 SPATA31A3Q5VYP0 1347 aa41.37■■■■■ 4.21
HLA-C-207ENST00000484378 ANKARQ7Z5J8 1434 aa41.36■■■■■ 4.21
HLA-C-207ENST00000484378 MARF1Q9Y4F3 1742 aaKnown RBP41.35■■■■■ 4.21
HLA-C-207ENST00000484378 RGS12O14924 1447 aa41.34■■■■■ 4.21
HLA-C-207ENST00000484378 USP32Q8NFA0 1604 aa41.33■■■■■ 4.21
HLA-C-207ENST00000484378 FNBP4Q8N3X1 1017 aaPredicted RBP41.33■■■■■ 4.21
HLA-C-207ENST00000484378 HIRIP3Q9BW71 556 aaPredicted RBP41.33■■■■■ 4.21
HLA-C-207ENST00000484378 MINK1Q8N4C8 1332 aaPredicted RBP41.32■■■■■ 4.21
HLA-C-207ENST00000484378 TNS3Q68CZ2 1445 aa41.3■■■■■ 4.2
HLA-C-207ENST00000484378 EIF3AQ14152 1382 aaKnown RBP41.29■■■■■ 4.2
HLA-C-207ENST00000484378 PSME1Q06323 249 aa41.29■■■■■ 4.2
HLA-C-207ENST00000484378 TRPC5Q9UL62 973 aaPredicted RBP41.29■■■■■ 4.2
HLA-C-207ENST00000484378 ARHGEF28Q8N1W1 1705 aaKnown RBP41.28■■■■■ 4.2
HLA-C-207ENST00000484378 UPF1Q92900 1129 aaKnown RBP eCLIP41.26■■■■■ 4.2
HLA-C-207ENST00000484378 TULP4Q9NRJ4 1543 aa41.24■■■■■ 4.19
HLA-C-207ENST00000484378 PMFBP1Q8TBY8 1022 aa41.24■■■■■ 4.19
HLA-C-207ENST00000484378 ATRNO75882 1429 aa41.24■■■■■ 4.19
HLA-C-207ENST00000484378 SBNO1A3KN83 1393 aa41.24■■■■■ 4.19
HLA-C-207ENST00000484378 KIAA1210Q9ULL0 1709 aa41.21■■■■■ 4.19
HLA-C-207ENST00000484378 WASLO00401 505 aaPredicted RBP41.2■■■■■ 4.19
HLA-C-207ENST00000484378 BCL9LQ86UU0 1499 aa41.2■■■■■ 4.19
HLA-C-207ENST00000484378 ARHGEF10O15013 1369 aa41.18■■■■■ 4.18
HLA-C-207ENST00000484378 HAP1P54257 671 aaPredicted RBP41.18■■■■■ 4.18
HLA-C-207ENST00000484378 LMOD2Q6P5Q4 547 aa41.18■■■■■ 4.18
HLA-C-207ENST00000484378 PRR36Q9H6K5 1346 aa41.18■■■■■ 4.18
HLA-C-207ENST00000484378 PLEKHG5O94827 1062 aa41.14■■■■■ 4.18
HLA-C-207ENST00000484378 TNKS1BP1Q9C0C2 1729 aaKnown RBP41.13■■■■■ 4.18
HLA-C-207ENST00000484378 ABCA3Q99758 1704 aa41.13■■■■■ 4.17
HLA-C-207ENST00000484378 CABLES1Q8TDN4 633 aa41.12■■■■■ 4.17
HLA-C-207ENST00000484378 GPRASP1Q5JY77 1395 aa41.12■■■■■ 4.17
HLA-C-207ENST00000484378 TRPM3Q9HCF6 1732 aaPredicted RBP41.11■■■■■ 4.17
HLA-C-207ENST00000484378 SLIT2O94813 1529 aa41.1■■■■■ 4.17
HLA-C-207ENST00000484378 ITSN1Q15811 1721 aa41.09■■■■■ 4.17
HLA-C-207ENST00000484378 ATP7BP35670 1465 aa41.07■■■■■ 4.16
HLA-C-207ENST00000484378 UNC5CLQ8IV45 518 aa41.06■■■■■ 4.16
HLA-C-207ENST00000484378 NGDNQ8NEJ9 315 aaKnown RBP41.05■■■■■ 4.16
HLA-C-207ENST00000484378 NBPF1Q3BBV0 1214 aa41.04■■■■■ 4.16
HLA-C-207ENST00000484378 GJD4Q96KN9 370 aaPredicted RBP41.04■■■■■ 4.16
HLA-C-207ENST00000484378 ALS2Q96Q42 1657 aa41.04■■■■■ 4.16
HLA-C-207ENST00000484378 ATAD2Q6PL18 1390 aa41.03■■■■■ 4.16
HLA-C-207ENST00000484378 PLCH1Q4KWH8 1693 aa41.01■■■■■ 4.16
HLA-C-207ENST00000484378 NUDT16Q96DE0 195 aaKnown RBP41.01■■■■■ 4.16
HLA-C-207ENST00000484378 CDK19Q9BWU1 502 aa40.98■■■■■ 4.15
HLA-C-207ENST00000484378 RALGAPBQ86X10 1494 aa40.97■■■■■ 4.15
HLA-C-207ENST00000484378 NWD2Q9ULI1 1742 aa40.97■■■■■ 4.15
HLA-C-207ENST00000484378 GLI3P10071 1580 aa40.96■■■■■ 4.15
HLA-C-207ENST00000484378 L3MBTL2Q969R5 705 aa40.95■■■■■ 4.15
HLA-C-207ENST00000484378 PAK3O75914 559 aaPredicted RBP40.94■■■■■ 4.14
HLA-C-207ENST00000484378 TOPAZ1Q8N9V7 1692 aa40.94■■■■■ 4.14
HLA-C-207ENST00000484378 SIN3AQ96ST3 1273 aa40.92■■■■■ 4.14
HLA-C-207ENST00000484378 EP400Q96L91 3159 aa40.91■■■■■ 4.14
HLA-C-207ENST00000484378 CENPJQ9HC77 1338 aaPredicted RBP40.9■■■■■ 4.14
HLA-C-207ENST00000484378 FAM83GA6ND36 823 aa40.87■■■■■ 4.13
HLA-C-207ENST00000484378 NEUROD1Q13562 356 aa40.87■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms