RNA–Protein interactions for RNA: ENST00000484313.3

ZEB2-222, Transcript of zinc finger E-box binding homeobox 2, human

TSL 1 (best)

Gene ZEB2, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-222	ENST00000484313	ADAMTS13	Q76LX8	1427 aa		12.99	□□□□□ -0.33
ZEB2-222	ENST00000484313	VGF	O15240	615 aa	Predicted RBP	12.99	□□□□□ -0.33
ZEB2-222	ENST00000484313	GTPBP6	O43824	516 aa	Predicted RBP	12.99	□□□□□ -0.33
ZEB2-222	ENST00000484313	SLC52A1	Q9NWF4	448 aa		12.99	□□□□□ -0.33
ZEB2-222	ENST00000484313	XRN1	Q8IZH2	1706 aa	Known RBP	12.99	□□□□□ -0.33
ZEB2-222	ENST00000484313	RIMS2	Q9UQ26	1411 aa		12.98	□□□□□ -0.33
ZEB2-222	ENST00000484313	ROCK1	Q13464	1354 aa		12.98	□□□□□ -0.33
ZEB2-222	ENST00000484313	CHIC2	Q9UKJ5	165 aa		12.98	□□□□□ -0.33
ZEB2-222	ENST00000484313	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.97	□□□□□ -0.33
ZEB2-222	ENST00000484313	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.97	□□□□□ -0.33
ZEB2-222	ENST00000484313	NCOA3	Q9Y6Q9	1424 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	SPHKAP	Q2M3C7	1700 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	SHPRH	Q149N8	1683 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	STK25	O00506	426 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	RASEF	Q8IZ41	740 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	SLC26A8	Q96RN1	970 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	SGIP1	Q9BQI5	828 aa		12.96	□□□□□ -0.33
ZEB2-222	ENST00000484313	SETBP1	Q9Y6X0	1596 aa		12.95	□□□□□ -0.34
ZEB2-222	ENST00000484313	SETD1A	O15047	1707 aa	Known RBP	12.95	□□□□□ -0.34
ZEB2-222	ENST00000484313	PIK3R4	Q99570	1358 aa		12.93	□□□□□ -0.34
ZEB2-222	ENST00000484313	TRPM2	O94759	1503 aa		12.93	□□□□□ -0.34
ZEB2-222	ENST00000484313	LRP6	O75581	1613 aa		12.92	□□□□□ -0.34
ZEB2-222	ENST00000484313	NBR1	Q14596	966 aa		12.92	□□□□□ -0.34
ZEB2-222	ENST00000484313	MSH6	P52701	1360 aa		12.92	□□□□□ -0.34
ZEB2-222	ENST00000484313	NHSL1	Q5SYE7	1610 aa		12.91	□□□□□ -0.34
ZEB2-222	ENST00000484313	PTPRU	Q92729	1446 aa		12.91	□□□□□ -0.34
ZEB2-222	ENST00000484313	PROSER2	Q86WR7	435 aa	Predicted RBP	12.9	□□□□□ -0.34
ZEB2-222	ENST00000484313	RBM33	Q96EV2	1170 aa	Known RBP	12.9	□□□□□ -0.34
ZEB2-222	ENST00000484313	TBX22	Q9Y458	520 aa		12.9	□□□□□ -0.34
ZEB2-222	ENST00000484313	CLTCL1	P53675	1640 aa		12.89	□□□□□ -0.35
ZEB2-222	ENST00000484313	POTEA	Q6S8J7	498 aa		12.89	□□□□□ -0.35
ZEB2-222	ENST00000484313	DCC	P43146	1447 aa		12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	NEXMIF	Q5QGS0	1516 aa		12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	NALCN	Q8IZF0	1738 aa		12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	FAM50A	Q14320	339 aa	Known RBP	12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	JCAD	Q9P266	1359 aa		12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	LAMC1	P11047	1609 aa		12.88	□□□□□ -0.35
ZEB2-222	ENST00000484313	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.87	□□□□□ -0.35
ZEB2-222	ENST00000484313	ZFP91	Q96JP5	570 aa	Predicted RBP	12.87	□□□□□ -0.35
ZEB2-222	ENST00000484313	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.86	□□□□□ -0.35
ZEB2-222	ENST00000484313	SLAIN2	Q9P270	581 aa		12.86	□□□□□ -0.35
ZEB2-222	ENST00000484313	STK24	Q9Y6E0	443 aa		12.86	□□□□□ -0.35
ZEB2-222	ENST00000484313	ASXL1	Q8IXJ9	1541 aa		12.86	□□□□□ -0.35
ZEB2-222	ENST00000484313	PRAG1	Q86YV5	1406 aa		12.86	□□□□□ -0.35
ZEB2-222	ENST00000484313	PYGB	P11216	843 aa		12.85	□□□□□ -0.35
ZEB2-222	ENST00000484313	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ZEB2-222	ENST00000484313	MST1R	Q04912	1400 aa		12.83	□□□□□ -0.36
ZEB2-222	ENST00000484313	PITPNM1	O00562	1244 aa		12.83	□□□□□ -0.36
ZEB2-222	ENST00000484313	RYDEN	Q9NUL5	291 aa	Known RBP	12.83	□□□□□ -0.36
ZEB2-222	ENST00000484313	KIF1B	O60333	1816 aa		12.83	□□□□□ -0.36
ZEB2-222	ENST00000484313	NUP155	O75694	1391 aa		12.82	□□□□□ -0.36
ZEB2-222	ENST00000484313	RRBP1	Q9P2E9	1410 aa	Known RBP	12.81	□□□□□ -0.36
ZEB2-222	ENST00000484313	PPP1R15A	O75807	674 aa	Predicted RBP	12.81	□□□□□ -0.36
ZEB2-222	ENST00000484313	HDGF	P51858	240 aa	Known RBP	12.81	□□□□□ -0.36
ZEB2-222	ENST00000484313	SPATA31A6	Q5VVP1	1343 aa		12.81	□□□□□ -0.36
ZEB2-222	ENST00000484313	SETD5	Q9C0A6	1442 aa		12.8	□□□□□ -0.36
ZEB2-222	ENST00000484313	ADGRL3	Q9HAR2	1447 aa		12.8	□□□□□ -0.36
ZEB2-222	ENST00000484313	PPL	O60437	1756 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	CADPS2	Q86UW7	1296 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	C19orf44	Q9H6X5	657 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	MET	P08581	1390 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	NAIP	Q13075	1403 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	PTCH1	Q13635	1447 aa		12.79	□□□□□ -0.36
ZEB2-222	ENST00000484313	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.78	□□□□□ -0.36
ZEB2-222	ENST00000484313	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.78	□□□□□ -0.36
ZEB2-222	ENST00000484313	BRINP3	Q76B58	766 aa		12.78	□□□□□ -0.36
ZEB2-222	ENST00000484313	CHRDL2	Q6WN34	429 aa		12.77	□□□□□ -0.37
ZEB2-222	ENST00000484313	IFT172	Q9UG01	1749 aa		12.76	□□□□□ -0.37
ZEB2-222	ENST00000484313	AMOTL2	Q9Y2J4	779 aa		12.76	□□□□□ -0.37
ZEB2-222	ENST00000484313	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.75	□□□□□ -0.37
ZEB2-222	ENST00000484313	CDC42BPG	Q6DT37	1551 aa		12.73	□□□□□ -0.37
ZEB2-222	ENST00000484313	HFM1	A2PYH4	1435 aa		12.73	□□□□□ -0.37
ZEB2-222	ENST00000484313	PNPLA6	Q8IY17	1366 aa		12.72	□□□□□ -0.37
ZEB2-222	ENST00000484313	KNDC1	Q76NI1	1749 aa		12.72	□□□□□ -0.37
ZEB2-222	ENST00000484313	ATF3	P18847	181 aa		12.72	□□□□□ -0.37
ZEB2-222	ENST00000484313	C1orf167	Q5SNV9	1468 aa		12.72	□□□□□ -0.37
ZEB2-222	ENST00000484313	MARF1	Q9Y4F3	1742 aa	Known RBP	12.7	□□□□□ -0.38
ZEB2-222	ENST00000484313	ROBO2	Q9HCK4	1378 aa		12.69	□□□□□ -0.38
ZEB2-222	ENST00000484313	ZNF772	Q68DY9	489 aa	Predicted RBP	12.69	□□□□□ -0.38
ZEB2-222	ENST00000484313	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.69	□□□□□ -0.38
ZEB2-222	ENST00000484313	C14orf37	Q86TY3	774 aa		12.69	□□□□□ -0.38
ZEB2-222	ENST00000484313	RGS12	O14924	1447 aa		12.69	□□□□□ -0.38
ZEB2-222	ENST00000484313	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.68	□□□□□ -0.38
ZEB2-222	ENST00000484313	CHADL	Q6NUI6	762 aa		12.67	□□□□□ -0.38
ZEB2-222	ENST00000484313	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
ZEB2-222	ENST00000484313	TECPR2	O15040	1411 aa		12.67	□□□□□ -0.38
ZEB2-222	ENST00000484313	MYOM2	P54296	1465 aa		12.66	□□□□□ -0.38
ZEB2-222	ENST00000484313	ITGAE	P38570	1179 aa		12.66	□□□□□ -0.38
ZEB2-222	ENST00000484313	PXDN	Q92626	1479 aa		12.65	□□□□□ -0.38
ZEB2-222	ENST00000484313	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.65	□□□□□ -0.38
ZEB2-222	ENST00000484313	SPATA31E1	Q6ZUB1	1445 aa		12.65	□□□□□ -0.38
ZEB2-222	ENST00000484313	FMN2	Q9NZ56	1722 aa		12.65	□□□□□ -0.38
ZEB2-222	ENST00000484313	AFF2	P51816	1311 aa		12.64	□□□□□ -0.39
ZEB2-222	ENST00000484313	SOS2	Q07890	1332 aa	Predicted RBP	12.64	□□□□□ -0.39
ZEB2-222	ENST00000484313	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.64	□□□□□ -0.39
ZEB2-222	ENST00000484313	PDAP1	Q13442	181 aa	Known RBP	12.63	□□□□□ -0.39
ZEB2-222	ENST00000484313	ZNF326	Q5BKZ1	582 aa	Known RBP	12.63	□□□□□ -0.39
ZEB2-222	ENST00000484313	MEX3C	Q5U5Q3	659 aa	Known RBP	12.63	□□□□□ -0.39
ZEB2-222	ENST00000484313	DDX17	Q92841	729 aa	Known RBP	12.63	□□□□□ -0.39
ZEB2-222	ENST00000484313	LRRC59	Q96AG4	307 aa	Known RBP	12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms