RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FMN2Q9NZ56 1722 aa17.91■□□□□ 0.46
MSH5-216ENST00000484309 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
MSH5-216ENST00000484309 DDX17Q92841 729 aaKnown RBP17.9■□□□□ 0.46
MSH5-216ENST00000484309 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
MSH5-216ENST00000484309 JCADQ9P266 1359 aa17.88■□□□□ 0.45
MSH5-216ENST00000484309 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
MSH5-216ENST00000484309 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
MSH5-216ENST00000484309 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
MSH5-216ENST00000484309 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
MSH5-216ENST00000484309 TRIM26Q12899 539 aaPredicted RBP17.85■□□□□ 0.45
MSH5-216ENST00000484309 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
MSH5-216ENST00000484309 KIAA1210Q9ULL0 1709 aa17.85■□□□□ 0.45
MSH5-216ENST00000484309 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
MSH5-216ENST00000484309 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
MSH5-216ENST00000484309 LRP6O75581 1613 aa17.83■□□□□ 0.45
MSH5-216ENST00000484309 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
MSH5-216ENST00000484309 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
MSH5-216ENST00000484309 POGKQ9P215 609 aa17.81■□□□□ 0.44
MSH5-216ENST00000484309 ESCO1Q5FWF5 840 aa17.8■□□□□ 0.44
MSH5-216ENST00000484309 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
MSH5-216ENST00000484309 STAC3Q96MF2 364 aa17.8■□□□□ 0.44
MSH5-216ENST00000484309 KIF1AQ12756 1690 aa17.8■□□□□ 0.44
MSH5-216ENST00000484309 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
MSH5-216ENST00000484309 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
MSH5-216ENST00000484309 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
MSH5-216ENST00000484309 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
MSH5-216ENST00000484309 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
MSH5-216ENST00000484309 RGS17Q9UGC6 210 aaPredicted RBP17.78■□□□□ 0.44
MSH5-216ENST00000484309 SPATA31A6Q5VVP1 1343 aa17.77■□□□□ 0.44
MSH5-216ENST00000484309 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.44
MSH5-216ENST00000484309 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
MSH5-216ENST00000484309 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
MSH5-216ENST00000484309 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
MSH5-216ENST00000484309 L3MBTL2Q969R5 705 aa17.76■□□□□ 0.43
MSH5-216ENST00000484309 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
MSH5-216ENST00000484309 PNPLA6Q8IY17 1366 aa17.76■□□□□ 0.43
MSH5-216ENST00000484309 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
MSH5-216ENST00000484309 PXDNQ92626 1479 aa17.75■□□□□ 0.43
MSH5-216ENST00000484309 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
MSH5-216ENST00000484309 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
MSH5-216ENST00000484309 FOXO3O43524 673 aa17.73■□□□□ 0.43
MSH5-216ENST00000484309 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
MSH5-216ENST00000484309 COL22A1Q8NFW1 1626 aaPredicted RBP17.72■□□□□ 0.43
MSH5-216ENST00000484309 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
MSH5-216ENST00000484309 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
MSH5-216ENST00000484309 MARF1Q9Y4F3 1742 aaKnown RBP17.7■□□□□ 0.42
MSH5-216ENST00000484309 SOCS7O14512 581 aa17.7■□□□□ 0.42
MSH5-216ENST00000484309 POTEAQ6S8J7 498 aa17.7■□□□□ 0.42
MSH5-216ENST00000484309 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
MSH5-216ENST00000484309 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
MSH5-216ENST00000484309 ANKARQ7Z5J8 1434 aa17.68■□□□□ 0.42
MSH5-216ENST00000484309 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
MSH5-216ENST00000484309 PRR36Q9H6K5 1346 aa17.67■□□□□ 0.42
MSH5-216ENST00000484309 WASLO00401 505 aaPredicted RBP17.66■□□□□ 0.42
MSH5-216ENST00000484309 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
MSH5-216ENST00000484309 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
MSH5-216ENST00000484309 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
MSH5-216ENST00000484309 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
MSH5-216ENST00000484309 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
MSH5-216ENST00000484309 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
MSH5-216ENST00000484309 ATP7BP35670 1465 aa17.64■□□□□ 0.41
MSH5-216ENST00000484309 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
MSH5-216ENST00000484309 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
MSH5-216ENST00000484309 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
MSH5-216ENST00000484309 AFF2P51816 1311 aa17.63■□□□□ 0.41
MSH5-216ENST00000484309 NBPF8Q3BBV2 869 aa17.62■□□□□ 0.41
MSH5-216ENST00000484309 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
MSH5-216ENST00000484309 TNS3Q68CZ2 1445 aa17.62■□□□□ 0.41
MSH5-216ENST00000484309 PSME1Q06323 249 aa17.61■□□□□ 0.41
MSH5-216ENST00000484309 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
MSH5-216ENST00000484309 SPATA31A3Q5VYP0 1347 aa17.61■□□□□ 0.41
MSH5-216ENST00000484309 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
MSH5-216ENST00000484309 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
MSH5-216ENST00000484309 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
MSH5-216ENST00000484309 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
MSH5-216ENST00000484309 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
MSH5-216ENST00000484309 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
MSH5-216ENST00000484309 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
MSH5-216ENST00000484309 NGDNQ8NEJ9 315 aaKnown RBP17.57■□□□□ 0.4
MSH5-216ENST00000484309 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
MSH5-216ENST00000484309 GPRASP1Q5JY77 1395 aa17.56■□□□□ 0.4
MSH5-216ENST00000484309 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
MSH5-216ENST00000484309 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
MSH5-216ENST00000484309 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
MSH5-216ENST00000484309 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
MSH5-216ENST00000484309 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
MSH5-216ENST00000484309 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
MSH5-216ENST00000484309 HAP1P54257 671 aaPredicted RBP17.53■□□□□ 0.4
MSH5-216ENST00000484309 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
MSH5-216ENST00000484309 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.4
MSH5-216ENST00000484309 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
MSH5-216ENST00000484309 USP21Q9UK80 565 aa17.52■□□□□ 0.4
MSH5-216ENST00000484309 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
MSH5-216ENST00000484309 RXRBP28702 533 aa17.51■□□□□ 0.39
MSH5-216ENST00000484309 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
MSH5-216ENST00000484309 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
MSH5-216ENST00000484309 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
MSH5-216ENST00000484309 ACEP12821 1306 aa17.5■□□□□ 0.39
MSH5-216ENST00000484309 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
MSH5-216ENST00000484309 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms