RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PXDNQ92626 1479 aa16.67■□□□□ 0.26
SMARCC1-205ENST00000483847 PRAG1Q86YV5 1406 aa16.66■□□□□ 0.26
SMARCC1-205ENST00000483847 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
SMARCC1-205ENST00000483847 FOXD1Q16676 465 aa16.65■□□□□ 0.26
SMARCC1-205ENST00000483847 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
SMARCC1-205ENST00000483847 GJD4Q96KN9 370 aaPredicted RBP16.64■□□□□ 0.25
SMARCC1-205ENST00000483847 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
SMARCC1-205ENST00000483847 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
SMARCC1-205ENST00000483847 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
SMARCC1-205ENST00000483847 GLI3P10071 1580 aa16.63■□□□□ 0.25
SMARCC1-205ENST00000483847 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
SMARCC1-205ENST00000483847 VGFO15240 615 aaPredicted RBP16.62■□□□□ 0.25
SMARCC1-205ENST00000483847 FOXO3O43524 673 aa16.62■□□□□ 0.25
SMARCC1-205ENST00000483847 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
SMARCC1-205ENST00000483847 PPLO60437 1756 aa16.6■□□□□ 0.25
SMARCC1-205ENST00000483847 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
SMARCC1-205ENST00000483847 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
SMARCC1-205ENST00000483847 DEFB132Q7Z7B7 95 aa16.59■□□□□ 0.25
SMARCC1-205ENST00000483847 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
SMARCC1-205ENST00000483847 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
SMARCC1-205ENST00000483847 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
SMARCC1-205ENST00000483847 NAIPQ13075 1403 aa16.58■□□□□ 0.24
SMARCC1-205ENST00000483847 SLIT2O94813 1529 aa16.58■□□□□ 0.24
SMARCC1-205ENST00000483847 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
SMARCC1-205ENST00000483847 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
SMARCC1-205ENST00000483847 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
SMARCC1-205ENST00000483847 USP32Q8NFA0 1604 aa16.54■□□□□ 0.24
SMARCC1-205ENST00000483847 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
SMARCC1-205ENST00000483847 SPATA31A3Q5VYP0 1347 aa16.53■□□□□ 0.24
SMARCC1-205ENST00000483847 STK26Q9P289 416 aa16.53■□□□□ 0.24
SMARCC1-205ENST00000483847 LRP5O75197 1615 aa16.52■□□□□ 0.24
SMARCC1-205ENST00000483847 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.24
SMARCC1-205ENST00000483847 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
SMARCC1-205ENST00000483847 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
SMARCC1-205ENST00000483847 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
SMARCC1-205ENST00000483847 TECPR2O15040 1411 aa16.51■□□□□ 0.23
SMARCC1-205ENST00000483847 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
SMARCC1-205ENST00000483847 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
SMARCC1-205ENST00000483847 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
SMARCC1-205ENST00000483847 KRT28Q7Z3Y7 464 aa16.49■□□□□ 0.23
SMARCC1-205ENST00000483847 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
SMARCC1-205ENST00000483847 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 VPS72Q15906 364 aa16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
SMARCC1-205ENST00000483847 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
SMARCC1-205ENST00000483847 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
SMARCC1-205ENST00000483847 ABCA3Q99758 1704 aa16.47■□□□□ 0.23
SMARCC1-205ENST00000483847 IFT172Q9UG01 1749 aa16.46■□□□□ 0.23
SMARCC1-205ENST00000483847 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
SMARCC1-205ENST00000483847 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.23
SMARCC1-205ENST00000483847 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
SMARCC1-205ENST00000483847 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
SMARCC1-205ENST00000483847 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
SMARCC1-205ENST00000483847 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
SMARCC1-205ENST00000483847 HAP1P54257 671 aaPredicted RBP16.44■□□□□ 0.22
SMARCC1-205ENST00000483847 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
SMARCC1-205ENST00000483847 SPATA31E1Q6ZUB1 1445 aa16.43■□□□□ 0.22
SMARCC1-205ENST00000483847 HRCP23327 699 aa16.42■□□□□ 0.22
SMARCC1-205ENST00000483847 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
SMARCC1-205ENST00000483847 YTHDC2Q9H6S0 1430 aaKnown RBP16.42■□□□□ 0.22
SMARCC1-205ENST00000483847 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
SMARCC1-205ENST00000483847 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
SMARCC1-205ENST00000483847 A0A0G2JS52 829 aa16.4■□□□□ 0.22
SMARCC1-205ENST00000483847 FAM83GA6ND36 823 aa16.4■□□□□ 0.22
SMARCC1-205ENST00000483847 MYT1Q01538 1121 aa16.4■□□□□ 0.22
SMARCC1-205ENST00000483847 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
SMARCC1-205ENST00000483847 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
SMARCC1-205ENST00000483847 BAG6P46379 1132 aa16.39■□□□□ 0.21
SMARCC1-205ENST00000483847 PSME1Q06323 249 aa16.39■□□□□ 0.21
SMARCC1-205ENST00000483847 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
SMARCC1-205ENST00000483847 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
SMARCC1-205ENST00000483847 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
SMARCC1-205ENST00000483847 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
SMARCC1-205ENST00000483847 EN1Q05925 392 aaPredicted RBP16.37■□□□□ 0.21
SMARCC1-205ENST00000483847 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
SMARCC1-205ENST00000483847 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
SMARCC1-205ENST00000483847 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCC1-205ENST00000483847 R3HDM1Q15032 1099 aaKnown RBP16.35■□□□□ 0.21
SMARCC1-205ENST00000483847 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
SMARCC1-205ENST00000483847 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
SMARCC1-205ENST00000483847 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
SMARCC1-205ENST00000483847 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
SMARCC1-205ENST00000483847 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.21
SMARCC1-205ENST00000483847 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.2
SMARCC1-205ENST00000483847 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
SMARCC1-205ENST00000483847 PRAM1Q96QH2 718 aa16.32■□□□□ 0.2
SMARCC1-205ENST00000483847 C14orf93Q9H972 538 aaKnown RBP16.32■□□□□ 0.2
SMARCC1-205ENST00000483847 THSD7AQ9UPZ6 1657 aa16.31■□□□□ 0.2
SMARCC1-205ENST00000483847 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
SMARCC1-205ENST00000483847 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
SMARCC1-205ENST00000483847 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
SMARCC1-205ENST00000483847 CRYBG1Q9Y4K1 1723 aa16.3■□□□□ 0.2
SMARCC1-205ENST00000483847 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
SMARCC1-205ENST00000483847 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
SMARCC1-205ENST00000483847 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
SMARCC1-205ENST00000483847 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms