RNA–Protein interactions for RNA: ENST00000483553.5

SKIV2L-209, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 1,307 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-209ENST00000483553 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
SKIV2L-209ENST00000483553 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
SKIV2L-209ENST00000483553 KIF1BO60333 1816 aa23.5■■□□□ 1.35
SKIV2L-209ENST00000483553 FNBP4Q8N3X1 1017 aaPredicted RBP23.5■■□□□ 1.35
SKIV2L-209ENST00000483553 VGFO15240 615 aaPredicted RBP23.49■■□□□ 1.35
SKIV2L-209ENST00000483553 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
SKIV2L-209ENST00000483553 DHX57Q6P158 1386 aaKnown RBP23.45■■□□□ 1.34
SKIV2L-209ENST00000483553 ATRNO75882 1429 aa23.44■■□□□ 1.34
SKIV2L-209ENST00000483553 ZRANB1Q9UGI0 708 aa23.44■■□□□ 1.34
SKIV2L-209ENST00000483553 EP400Q96L91 3159 aa23.44■■□□□ 1.34
SKIV2L-209ENST00000483553 PRAG1Q86YV5 1406 aa23.44■■□□□ 1.34
SKIV2L-209ENST00000483553 COL22A1Q8NFW1 1626 aaPredicted RBP23.44■■□□□ 1.34
SKIV2L-209ENST00000483553 CCDC125Q86Z20 511 aa23.42■■□□□ 1.34
SKIV2L-209ENST00000483553 RPGRIP1LQ68CZ1 1315 aa23.42■■□□□ 1.34
SKIV2L-209ENST00000483553 NPHP3Q7Z494 1330 aa23.41■■□□□ 1.34
SKIV2L-209ENST00000483553 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
SKIV2L-209ENST00000483553 MYOM2P54296 1465 aa23.38■■□□□ 1.33
SKIV2L-209ENST00000483553 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
SKIV2L-209ENST00000483553 ESCO1Q5FWF5 840 aa23.37■■□□□ 1.33
SKIV2L-209ENST00000483553 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
SKIV2L-209ENST00000483553 MARF1Q9Y4F3 1742 aaKnown RBP23.34■■□□□ 1.33
SKIV2L-209ENST00000483553 GJD4Q96KN9 370 aaPredicted RBP23.33■■□□□ 1.33
SKIV2L-209ENST00000483553 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
SKIV2L-209ENST00000483553 PXDNQ92626 1479 aa23.33■■□□□ 1.33
SKIV2L-209ENST00000483553 CDC42BPGQ6DT37 1551 aa23.33■■□□□ 1.33
SKIV2L-209ENST00000483553 FOXO3O43524 673 aa23.32■■□□□ 1.32
SKIV2L-209ENST00000483553 PPLO60437 1756 aa23.31■■□□□ 1.32
SKIV2L-209ENST00000483553 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
SKIV2L-209ENST00000483553 UNC5CLQ8IV45 518 aa23.27■■□□□ 1.32
SKIV2L-209ENST00000483553 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.26■■□□□ 1.31
SKIV2L-209ENST00000483553 IFT172Q9UG01 1749 aa23.26■■□□□ 1.31
SKIV2L-209ENST00000483553 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
SKIV2L-209ENST00000483553 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
SKIV2L-209ENST00000483553 SLIT2O94813 1529 aa23.23■■□□□ 1.31
SKIV2L-209ENST00000483553 RALGAPBQ86X10 1494 aa23.22■■□□□ 1.31
SKIV2L-209ENST00000483553 TECPR2O15040 1411 aa23.22■■□□□ 1.31
SKIV2L-209ENST00000483553 NUTM2FA1L443 756 aa23.22■■□□□ 1.31
SKIV2L-209ENST00000483553 WAPLQ7Z5K2 1190 aa23.22■■□□□ 1.31
SKIV2L-209ENST00000483553 STK26Q9P289 416 aa23.22■■□□□ 1.31
SKIV2L-209ENST00000483553 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
SKIV2L-209ENST00000483553 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
SKIV2L-209ENST00000483553 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.31
SKIV2L-209ENST00000483553 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
SKIV2L-209ENST00000483553 GLI3P10071 1580 aa23.2■■□□□ 1.3
SKIV2L-209ENST00000483553 ABCC11Q96J66 1382 aa23.19■■□□□ 1.3
SKIV2L-209ENST00000483553 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
SKIV2L-209ENST00000483553 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
SKIV2L-209ENST00000483553 KIF1AQ12756 1690 aa23.18■■□□□ 1.3
SKIV2L-209ENST00000483553 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
SKIV2L-209ENST00000483553 CLSPNQ9HAW4 1339 aa23.17■■□□□ 1.3
SKIV2L-209ENST00000483553 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
SKIV2L-209ENST00000483553 BRWD3Q6RI45 1802 aa23.16■■□□□ 1.3
SKIV2L-209ENST00000483553 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
SKIV2L-209ENST00000483553 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
SKIV2L-209ENST00000483553 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
SKIV2L-209ENST00000483553 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.3
SKIV2L-209ENST00000483553 DEFB132Q7Z7B7 95 aa23.14■■□□□ 1.3
SKIV2L-209ENST00000483553 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.3
SKIV2L-209ENST00000483553 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.29
SKIV2L-209ENST00000483553 PSME1Q06323 249 aa23.13■■□□□ 1.29
SKIV2L-209ENST00000483553 VPS72Q15906 364 aa23.13■■□□□ 1.29
SKIV2L-209ENST00000483553 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
SKIV2L-209ENST00000483553 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
SKIV2L-209ENST00000483553 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
SKIV2L-209ENST00000483553 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
SKIV2L-209ENST00000483553 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
SKIV2L-209ENST00000483553 NWD2Q9ULI1 1742 aa23.09■■□□□ 1.29
SKIV2L-209ENST00000483553 YTHDC2Q9H6S0 1430 aaKnown RBP23.09■■□□□ 1.29
SKIV2L-209ENST00000483553 KRT27Q7Z3Y8 459 aa23.08■■□□□ 1.29
SKIV2L-209ENST00000483553 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
SKIV2L-209ENST00000483553 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
SKIV2L-209ENST00000483553 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
SKIV2L-209ENST00000483553 RGPD8O14715 1765 aaPredicted RBP23.07■■□□□ 1.28
SKIV2L-209ENST00000483553 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
SKIV2L-209ENST00000483553 PLCH1Q4KWH8 1693 aa23.06■■□□□ 1.28
SKIV2L-209ENST00000483553 LRP5O75197 1615 aa23.05■■□□□ 1.28
SKIV2L-209ENST00000483553 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
SKIV2L-209ENST00000483553 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
SKIV2L-209ENST00000483553 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
SKIV2L-209ENST00000483553 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
SKIV2L-209ENST00000483553 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
SKIV2L-209ENST00000483553 PLEKHG5O94827 1062 aa23.03■■□□□ 1.28
SKIV2L-209ENST00000483553 NRXN1Q9ULB1 1477 aa23.02■■□□□ 1.28
SKIV2L-209ENST00000483553 BAG6P46379 1132 aa23.02■■□□□ 1.28
SKIV2L-209ENST00000483553 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
SKIV2L-209ENST00000483553 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
SKIV2L-209ENST00000483553 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
SKIV2L-209ENST00000483553 ABCA3Q99758 1704 aa23■■□□□ 1.27
SKIV2L-209ENST00000483553 STAC3Q96MF2 364 aa23■■□□□ 1.27
SKIV2L-209ENST00000483553 A0A0G2JS52 829 aa22.99■■□□□ 1.27
SKIV2L-209ENST00000483553 MYT1Q01538 1121 aa22.99■■□□□ 1.27
SKIV2L-209ENST00000483553 PSDA5PKW4 1024 aaPredicted RBP22.96■■□□□ 1.27
SKIV2L-209ENST00000483553 FAM98CQ17RN3 349 aaKnown RBP22.96■■□□□ 1.27
SKIV2L-209ENST00000483553 PRAM1Q96QH2 718 aa22.96■■□□□ 1.27
SKIV2L-209ENST00000483553 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
SKIV2L-209ENST00000483553 CFAP70Q5T0N1 1121 aa22.95■■□□□ 1.26
SKIV2L-209ENST00000483553 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
SKIV2L-209ENST00000483553 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
SKIV2L-209ENST00000483553 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
SKIV2L-209ENST00000483553 BTG4Q9NY30 223 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms