RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 POGKQ9P215 609 aa17.76■□□□□ 0.43
CPNE1-225ENST00000483495 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
CPNE1-225ENST00000483495 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
CPNE1-225ENST00000483495 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
CPNE1-225ENST00000483495 C3P01024 1663 aa17.74■□□□□ 0.43
CPNE1-225ENST00000483495 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
CPNE1-225ENST00000483495 METP08581 1390 aa17.73■□□□□ 0.43
CPNE1-225ENST00000483495 TECPR2O15040 1411 aa17.73■□□□□ 0.43
CPNE1-225ENST00000483495 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-225ENST00000483495 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
CPNE1-225ENST00000483495 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
CPNE1-225ENST00000483495 NSD2O96028 1365 aa17.72■□□□□ 0.43
CPNE1-225ENST00000483495 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-225ENST00000483495 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
CPNE1-225ENST00000483495 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
CPNE1-225ENST00000483495 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
CPNE1-225ENST00000483495 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
CPNE1-225ENST00000483495 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
CPNE1-225ENST00000483495 PLEKHG1Q9ULL1 1385 aa17.7■□□□□ 0.42
CPNE1-225ENST00000483495 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
CPNE1-225ENST00000483495 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-225ENST00000483495 SLIT1O75093 1534 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
CPNE1-225ENST00000483495 CD163L1Q9NR16 1453 aa17.68■□□□□ 0.42
CPNE1-225ENST00000483495 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
CPNE1-225ENST00000483495 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
CPNE1-225ENST00000483495 CPS1P31327 1500 aa17.68■□□□□ 0.42
CPNE1-225ENST00000483495 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
CPNE1-225ENST00000483495 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
CPNE1-225ENST00000483495 MED14O60244 1454 aa17.66■□□□□ 0.42
CPNE1-225ENST00000483495 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
CPNE1-225ENST00000483495 LTKP29376 864 aa17.66■□□□□ 0.42
CPNE1-225ENST00000483495 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
CPNE1-225ENST00000483495 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
CPNE1-225ENST00000483495 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
CPNE1-225ENST00000483495 SENP3-EIF4A1A0A087X0R7 540 aa17.64■□□□□ 0.41
CPNE1-225ENST00000483495 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
CPNE1-225ENST00000483495 BCANQ96GW7 911 aa17.63■□□□□ 0.41
CPNE1-225ENST00000483495 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
CPNE1-225ENST00000483495 ATP7BP35670 1465 aa17.62■□□□□ 0.41
CPNE1-225ENST00000483495 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-225ENST00000483495 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-225ENST00000483495 THEMISQ8N1K5 641 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-225ENST00000483495 CABP1Q9NZU7 370 aa17.6■□□□□ 0.41
CPNE1-225ENST00000483495 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
CPNE1-225ENST00000483495 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.41
CPNE1-225ENST00000483495 ZNF521Q96K83 1311 aa17.58■□□□□ 0.41
CPNE1-225ENST00000483495 SHPRHQ149N8 1683 aa17.58■□□□□ 0.4
CPNE1-225ENST00000483495 FYB1O15117 783 aa17.57■□□□□ 0.4
CPNE1-225ENST00000483495 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
CPNE1-225ENST00000483495 IRX6P78412 446 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-225ENST00000483495 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
CPNE1-225ENST00000483495 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
CPNE1-225ENST00000483495 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
CPNE1-225ENST00000483495 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
CPNE1-225ENST00000483495 MTHFSP49914 203 aa17.56■□□□□ 0.4
CPNE1-225ENST00000483495 NGEFQ8N5V2 710 aa17.56■□□□□ 0.4
CPNE1-225ENST00000483495 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
CPNE1-225ENST00000483495 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-225ENST00000483495 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
CPNE1-225ENST00000483495 CEP170BQ9Y4F5 1589 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-225ENST00000483495 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
CPNE1-225ENST00000483495 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
CPNE1-225ENST00000483495 RIMS1Q86UR5 1692 aaKnown RBP17.54■□□□□ 0.4
CPNE1-225ENST00000483495 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
CPNE1-225ENST00000483495 NUDT16Q96DE0 195 aaKnown RBP17.53■□□□□ 0.4
CPNE1-225ENST00000483495 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
CPNE1-225ENST00000483495 PTCH1Q13635 1447 aa17.53■□□□□ 0.4
CPNE1-225ENST00000483495 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
CPNE1-225ENST00000483495 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.4
CPNE1-225ENST00000483495 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
CPNE1-225ENST00000483495 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
CPNE1-225ENST00000483495 CCDC146Q8IYE0 955 aa17.52■□□□□ 0.39
CPNE1-225ENST00000483495 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.39
CPNE1-225ENST00000483495 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.39
CPNE1-225ENST00000483495 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.39
CPNE1-225ENST00000483495 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.39
CPNE1-225ENST00000483495 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
CPNE1-225ENST00000483495 APAF1O14727 1248 aa17.5■□□□□ 0.39
CPNE1-225ENST00000483495 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-225ENST00000483495 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
CPNE1-225ENST00000483495 ZNF142P52746 1687 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-225ENST00000483495 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
CPNE1-225ENST00000483495 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
CPNE1-225ENST00000483495 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
CPNE1-225ENST00000483495 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
CPNE1-225ENST00000483495 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
CPNE1-225ENST00000483495 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
CPNE1-225ENST00000483495 PNPLA6Q8IY17 1366 aa17.47■□□□□ 0.39
CPNE1-225ENST00000483495 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
CPNE1-225ENST00000483495 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
CPNE1-225ENST00000483495 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
CPNE1-225ENST00000483495 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
CPNE1-225ENST00000483495 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
CPNE1-225ENST00000483495 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
CPNE1-225ENST00000483495 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms