RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 STK26Q9P289 416 aa14□□□□□ -0.17
HMG20B-210ENST00000483417 LRP6O75581 1613 aa14□□□□□ -0.17
HMG20B-210ENST00000483417 NHSL1Q5SYE7 1610 aa14□□□□□ -0.17
HMG20B-210ENST00000483417 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
HMG20B-210ENST00000483417 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
HMG20B-210ENST00000483417 SHPRHQ149N8 1683 aa13.98□□□□□ -0.17
HMG20B-210ENST00000483417 MYOM2P54296 1465 aa13.98□□□□□ -0.17
HMG20B-210ENST00000483417 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
HMG20B-210ENST00000483417 LAMC1P11047 1609 aa13.97□□□□□ -0.17
HMG20B-210ENST00000483417 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
HMG20B-210ENST00000483417 SOS2Q07890 1332 aaPredicted RBP13.97□□□□□ -0.17
HMG20B-210ENST00000483417 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
HMG20B-210ENST00000483417 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
HMG20B-210ENST00000483417 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
HMG20B-210ENST00000483417 KNDC1Q76NI1 1749 aa13.94□□□□□ -0.18
HMG20B-210ENST00000483417 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
HMG20B-210ENST00000483417 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
HMG20B-210ENST00000483417 NUTM2BA6NNL0 878 aaPredicted RBP13.92□□□□□ -0.18
HMG20B-210ENST00000483417 NUTM2EB1AL46 878 aaPredicted RBP13.92□□□□□ -0.18
HMG20B-210ENST00000483417 ESCO1Q5FWF5 840 aa13.92□□□□□ -0.18
HMG20B-210ENST00000483417 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
HMG20B-210ENST00000483417 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
HMG20B-210ENST00000483417 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
HMG20B-210ENST00000483417 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
HMG20B-210ENST00000483417 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
HMG20B-210ENST00000483417 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
HMG20B-210ENST00000483417 ZNF772Q68DY9 489 aaPredicted RBP13.9□□□□□ -0.18
HMG20B-210ENST00000483417 FOXO3O43524 673 aa13.89□□□□□ -0.19
HMG20B-210ENST00000483417 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
HMG20B-210ENST00000483417 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
HMG20B-210ENST00000483417 PXDNQ92626 1479 aa13.88□□□□□ -0.19
HMG20B-210ENST00000483417 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
HMG20B-210ENST00000483417 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
HMG20B-210ENST00000483417 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
HMG20B-210ENST00000483417 AFF2P51816 1311 aa13.86□□□□□ -0.19
HMG20B-210ENST00000483417 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
HMG20B-210ENST00000483417 COL22A1Q8NFW1 1626 aaPredicted RBP13.84□□□□□ -0.19
HMG20B-210ENST00000483417 ADAMTS2O95450 1211 aa13.84□□□□□ -0.19
HMG20B-210ENST00000483417 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMG20B-210ENST00000483417 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
HMG20B-210ENST00000483417 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
HMG20B-210ENST00000483417 POGKQ9P215 609 aa13.84□□□□□ -0.19
HMG20B-210ENST00000483417 RXRBP28702 533 aa13.83□□□□□ -0.2
HMG20B-210ENST00000483417 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.2
HMG20B-210ENST00000483417 FNBP4Q8N3X1 1017 aaPredicted RBP13.83□□□□□ -0.2
HMG20B-210ENST00000483417 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
HMG20B-210ENST00000483417 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
HMG20B-210ENST00000483417 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
HMG20B-210ENST00000483417 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
HMG20B-210ENST00000483417 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
HMG20B-210ENST00000483417 NBPF1Q3BBV0 1214 aa13.81□□□□□ -0.2
HMG20B-210ENST00000483417 CLSPNQ9HAW4 1339 aa13.81□□□□□ -0.2
HMG20B-210ENST00000483417 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
HMG20B-210ENST00000483417 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
HMG20B-210ENST00000483417 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
HMG20B-210ENST00000483417 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
HMG20B-210ENST00000483417 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
HMG20B-210ENST00000483417 WASLO00401 505 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-210ENST00000483417 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-210ENST00000483417 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-210ENST00000483417 CDK12Q9NYV4 1490 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-210ENST00000483417 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
HMG20B-210ENST00000483417 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
HMG20B-210ENST00000483417 PSME1Q06323 249 aa13.77□□□□□ -0.21
HMG20B-210ENST00000483417 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
HMG20B-210ENST00000483417 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
HMG20B-210ENST00000483417 USP21Q9UK80 565 aa13.77□□□□□ -0.21
HMG20B-210ENST00000483417 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
HMG20B-210ENST00000483417 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
HMG20B-210ENST00000483417 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMG20B-210ENST00000483417 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
HMG20B-210ENST00000483417 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
HMG20B-210ENST00000483417 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
HMG20B-210ENST00000483417 ATRNO75882 1429 aa13.73□□□□□ -0.21
HMG20B-210ENST00000483417 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
HMG20B-210ENST00000483417 EIF3AQ14152 1382 aaKnown RBP13.73□□□□□ -0.21
HMG20B-210ENST00000483417 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
HMG20B-210ENST00000483417 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
HMG20B-210ENST00000483417 TIMELESSQ9UNS1 1208 aa13.73□□□□□ -0.21
HMG20B-210ENST00000483417 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
HMG20B-210ENST00000483417 RGS12O14924 1447 aa13.73□□□□□ -0.21
HMG20B-210ENST00000483417 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
HMG20B-210ENST00000483417 SLIT2O94813 1529 aa13.71□□□□□ -0.21
HMG20B-210ENST00000483417 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-210ENST00000483417 ATP7BP35670 1465 aa13.7□□□□□ -0.22
HMG20B-210ENST00000483417 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
HMG20B-210ENST00000483417 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-210ENST00000483417 ARHGEF10O15013 1369 aa13.7□□□□□ -0.22
HMG20B-210ENST00000483417 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
HMG20B-210ENST00000483417 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
HMG20B-210ENST00000483417 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
HMG20B-210ENST00000483417 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
HMG20B-210ENST00000483417 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
HMG20B-210ENST00000483417 NGDNQ8NEJ9 315 aaKnown RBP13.68□□□□□ -0.22
HMG20B-210ENST00000483417 ALS2Q96Q42 1657 aa13.67□□□□□ -0.22
HMG20B-210ENST00000483417 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
HMG20B-210ENST00000483417 CENPJQ9HC77 1338 aaPredicted RBP13.66□□□□□ -0.22
HMG20B-210ENST00000483417 ACEP12821 1306 aa13.65□□□□□ -0.22
HMG20B-210ENST00000483417 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
HMG20B-210ENST00000483417 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms