RNA–Protein interactions for RNA: ENST00000482960.1

NDUFA3-212, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 5

Gene NDUFA3, Length 266 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-212ENST00000482960 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
NDUFA3-212ENST00000482960 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
NDUFA3-212ENST00000482960 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
NDUFA3-212ENST00000482960 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
NDUFA3-212ENST00000482960 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
NDUFA3-212ENST00000482960 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
NDUFA3-212ENST00000482960 MYOM2P54296 1465 aa11.82□□□□□ -0.52
NDUFA3-212ENST00000482960 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
NDUFA3-212ENST00000482960 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
NDUFA3-212ENST00000482960 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
NDUFA3-212ENST00000482960 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
NDUFA3-212ENST00000482960 NHSL1Q5SYE7 1610 aa11.8□□□□□ -0.52
NDUFA3-212ENST00000482960 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
NDUFA3-212ENST00000482960 FOXO3O43524 673 aa11.79□□□□□ -0.52
NDUFA3-212ENST00000482960 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
NDUFA3-212ENST00000482960 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
NDUFA3-212ENST00000482960 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
NDUFA3-212ENST00000482960 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
NDUFA3-212ENST00000482960 TRAK1Q9UPV9 953 aa11.78□□□□□ -0.52
NDUFA3-212ENST00000482960 CDC42BPGQ6DT37 1551 aa11.77□□□□□ -0.53
NDUFA3-212ENST00000482960 LAMC1P11047 1609 aa11.77□□□□□ -0.53
NDUFA3-212ENST00000482960 SHPRHQ149N8 1683 aa11.77□□□□□ -0.53
NDUFA3-212ENST00000482960 PXDNQ92626 1479 aa11.76□□□□□ -0.53
NDUFA3-212ENST00000482960 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
NDUFA3-212ENST00000482960 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 ADAMTS2O95450 1211 aa11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 AFF2P51816 1311 aa11.74□□□□□ -0.53
NDUFA3-212ENST00000482960 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
NDUFA3-212ENST00000482960 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
NDUFA3-212ENST00000482960 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
NDUFA3-212ENST00000482960 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
NDUFA3-212ENST00000482960 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
NDUFA3-212ENST00000482960 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
NDUFA3-212ENST00000482960 POGKQ9P215 609 aa11.72□□□□□ -0.53
NDUFA3-212ENST00000482960 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
NDUFA3-212ENST00000482960 MINK1Q8N4C8 1332 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-212ENST00000482960 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
NDUFA3-212ENST00000482960 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
NDUFA3-212ENST00000482960 PHF8Q9UPP1 1060 aa11.71□□□□□ -0.53
NDUFA3-212ENST00000482960 FMN2Q9NZ56 1722 aa11.7□□□□□ -0.54
NDUFA3-212ENST00000482960 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
NDUFA3-212ENST00000482960 PMFBP1Q8TBY8 1022 aa11.7□□□□□ -0.54
NDUFA3-212ENST00000482960 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
NDUFA3-212ENST00000482960 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
NDUFA3-212ENST00000482960 RXRBP28702 533 aa11.69□□□□□ -0.54
NDUFA3-212ENST00000482960 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
NDUFA3-212ENST00000482960 USP32Q8NFA0 1604 aa11.68□□□□□ -0.54
NDUFA3-212ENST00000482960 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
NDUFA3-212ENST00000482960 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
NDUFA3-212ENST00000482960 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
NDUFA3-212ENST00000482960 RGPD8O14715 1765 aaPredicted RBP11.67□□□□□ -0.54
NDUFA3-212ENST00000482960 USP21Q9UK80 565 aa11.66□□□□□ -0.54
NDUFA3-212ENST00000482960 PSME1Q06323 249 aa11.65□□□□□ -0.54
NDUFA3-212ENST00000482960 NEUROD1Q13562 356 aa11.65□□□□□ -0.54
NDUFA3-212ENST00000482960 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
NDUFA3-212ENST00000482960 ANKARQ7Z5J8 1434 aa11.65□□□□□ -0.54
NDUFA3-212ENST00000482960 ADGRB2O60241 1585 aa11.65□□□□□ -0.54
NDUFA3-212ENST00000482960 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
NDUFA3-212ENST00000482960 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
NDUFA3-212ENST00000482960 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
NDUFA3-212ENST00000482960 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
NDUFA3-212ENST00000482960 RGS12O14924 1447 aa11.63□□□□□ -0.55
NDUFA3-212ENST00000482960 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
NDUFA3-212ENST00000482960 SBNO1A3KN83 1393 aa11.63□□□□□ -0.55
NDUFA3-212ENST00000482960 TNS3Q68CZ2 1445 aa11.62□□□□□ -0.55
NDUFA3-212ENST00000482960 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
NDUFA3-212ENST00000482960 ATRNO75882 1429 aa11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 TULP4Q9NRJ4 1543 aa11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 ATP7BP35670 1465 aa11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 CDK12Q9NYV4 1490 aaPredicted RBP11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 KIF1AQ12756 1690 aa11.61□□□□□ -0.55
NDUFA3-212ENST00000482960 SLIT2O94813 1529 aa11.6□□□□□ -0.55
NDUFA3-212ENST00000482960 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
NDUFA3-212ENST00000482960 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
NDUFA3-212ENST00000482960 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
NDUFA3-212ENST00000482960 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
NDUFA3-212ENST00000482960 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
NDUFA3-212ENST00000482960 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
NDUFA3-212ENST00000482960 KIAA1210Q9ULL0 1709 aa11.58□□□□□ -0.56
NDUFA3-212ENST00000482960 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
NDUFA3-212ENST00000482960 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
NDUFA3-212ENST00000482960 ACEP12821 1306 aa11.58□□□□□ -0.56
NDUFA3-212ENST00000482960 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
NDUFA3-212ENST00000482960 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
NDUFA3-212ENST00000482960 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
NDUFA3-212ENST00000482960 ARHGEF10O15013 1369 aa11.56□□□□□ -0.56
NDUFA3-212ENST00000482960 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
NDUFA3-212ENST00000482960 GPRASP1Q5JY77 1395 aa11.56□□□□□ -0.56
NDUFA3-212ENST00000482960 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
NDUFA3-212ENST00000482960 NUTM2GQ5VZR2 741 aa11.55□□□□□ -0.56
NDUFA3-212ENST00000482960 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
NDUFA3-212ENST00000482960 RALGAPBQ86X10 1494 aa11.55□□□□□ -0.56
NDUFA3-212ENST00000482960 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
NDUFA3-212ENST00000482960 SRPK2P78362 688 aaKnown RBP11.54□□□□□ -0.56
NDUFA3-212ENST00000482960 VPS72Q15906 364 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms