RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 PTCH1Q13635 1447 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 PTPRUQ92729 1446 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
SHANK2-216ENST00000482659 PIP4K2BP78356 416 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 NBPF1Q3BBV0 1214 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 WAPLQ7Z5K2 1190 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 ROCK2O75116 1388 aaKnown RBP6.44□□□□□ -1.38
SHANK2-216ENST00000482659 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
SHANK2-216ENST00000482659 ALKQ9UM73 1620 aa6.43□□□□□ -1.38
SHANK2-216ENST00000482659 EIF3AQ14152 1382 aaKnown RBP6.43□□□□□ -1.38
SHANK2-216ENST00000482659 DCCP43146 1447 aa6.42□□□□□ -1.38
SHANK2-216ENST00000482659 NBPF8Q3BBV2 869 aa6.42□□□□□ -1.38
SHANK2-216ENST00000482659 WASLO00401 505 aaPredicted RBP6.41□□□□□ -1.38
SHANK2-216ENST00000482659 DSG3P32926 999 aa6.41□□□□□ -1.38
SHANK2-216ENST00000482659 CENPJQ9HC77 1338 aaPredicted RBP6.41□□□□□ -1.38
SHANK2-216ENST00000482659 GPRASP1Q5JY77 1395 aa6.41□□□□□ -1.38
SHANK2-216ENST00000482659 ADGRL3Q9HAR2 1447 aa6.41□□□□□ -1.38
SHANK2-216ENST00000482659 NWD1Q149M9 1564 aa6.4□□□□□ -1.38
SHANK2-216ENST00000482659 POLR1AO95602 1720 aaPredicted RBP6.4□□□□□ -1.38
SHANK2-216ENST00000482659 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.38
SHANK2-216ENST00000482659 POLA2Q14181 598 aa6.4□□□□□ -1.38
SHANK2-216ENST00000482659 ESCO1Q5FWF5 840 aa6.4□□□□□ -1.38
SHANK2-216ENST00000482659 KIF1BO60333 1816 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 ABCB7O75027 752 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 SRPK2P78362 688 aaKnown RBP6.39□□□□□ -1.39
SHANK2-216ENST00000482659 CDCA8Q53HL2 280 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 BRINP3Q76B58 766 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
SHANK2-216ENST00000482659 CDK19Q9BWU1 502 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 CCDC61Q9Y6R9 512 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 EVC2Q86UK5 1308 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 MINK1Q8N4C8 1332 aaPredicted RBP6.39□□□□□ -1.39
SHANK2-216ENST00000482659 PLEKHH1Q9ULM0 1364 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 DLC1Q96QB1 1528 aa6.39□□□□□ -1.39
SHANK2-216ENST00000482659 ZEB1P37275 1124 aaPredicted RBP6.38□□□□□ -1.39
SHANK2-216ENST00000482659 EIF4G2P78344 907 aaKnown RBP eCLIP6.38□□□□□ -1.39
SHANK2-216ENST00000482659 PSME1Q06323 249 aa6.38□□□□□ -1.39
SHANK2-216ENST00000482659 LRRC59Q96AG4 307 aaKnown RBP6.38□□□□□ -1.39
SHANK2-216ENST00000482659 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
SHANK2-216ENST00000482659 NPHP3Q7Z494 1330 aa6.38□□□□□ -1.39
SHANK2-216ENST00000482659 ADGRB1O14514 1584 aa6.38□□□□□ -1.39
SHANK2-216ENST00000482659 NRXN3Q9Y4C0 1643 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 C1orf167Q5SNV9 1468 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 ST20-MTHFSA0A0A6YYL1 179 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 HSPA1LP34931 641 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 TMF1P82094 1093 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 NUDT16Q96DE0 195 aaKnown RBP6.37□□□□□ -1.39
SHANK2-216ENST00000482659 ORAI2Q96SN7 254 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 PHF8Q9UPP1 1060 aa6.37□□□□□ -1.39
SHANK2-216ENST00000482659 CFAP65Q6ZU64 1925 aaKnown RBP6.37□□□□□ -1.39
SHANK2-216ENST00000482659 LAMC1P11047 1609 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 RALGAPBQ86X10 1494 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 MST1RQ04912 1400 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 ANKARQ7Z5J8 1434 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 SBNO2Q9Y2G9 1366 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 PLEKHG3A1L390 1219 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 NUTM2FA1L443 756 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 FOXO3O43524 673 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 NGDNQ8NEJ9 315 aaKnown RBP6.36□□□□□ -1.39
SHANK2-216ENST00000482659 ZNF692Q9BU19 519 aaPredicted RBP6.36□□□□□ -1.39
SHANK2-216ENST00000482659 PPLO60437 1756 aa6.36□□□□□ -1.39
SHANK2-216ENST00000482659 ATAD2Q6PL18 1390 aa6.35□□□□□ -1.39
SHANK2-216ENST00000482659 KRT28Q7Z3Y7 464 aa6.35□□□□□ -1.39
SHANK2-216ENST00000482659 ASXL1Q8IXJ9 1541 aa6.35□□□□□ -1.39
SHANK2-216ENST00000482659 USP47Q96K76 1375 aa6.34□□□□□ -1.39
SHANK2-216ENST00000482659 XRN1Q8IZH2 1706 aaKnown RBP6.34□□□□□ -1.39
SHANK2-216ENST00000482659 SOS2Q07890 1332 aaPredicted RBP6.34□□□□□ -1.39
SHANK2-216ENST00000482659 SPATA31A6Q5VVP1 1343 aa6.34□□□□□ -1.39
SHANK2-216ENST00000482659 TESK2Q96S53 571 aa6.34□□□□□ -1.39
SHANK2-216ENST00000482659 CABP2Q9NPB3 220 aa6.34□□□□□ -1.39
SHANK2-216ENST00000482659 BRD4O60885 1362 aaPredicted RBP6.33□□□□□ -1.4
SHANK2-216ENST00000482659 JCADQ9P266 1359 aa6.33□□□□□ -1.4
SHANK2-216ENST00000482659 HDGFL2Q7Z4V5 671 aaPredicted RBP6.33□□□□□ -1.4
SHANK2-216ENST00000482659 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
SHANK2-216ENST00000482659 TERF2IPQ9NYB0 399 aa6.33□□□□□ -1.4
SHANK2-216ENST00000482659 CABP1Q9NZU7 370 aa6.33□□□□□ -1.4
SHANK2-216ENST00000482659 NINLQ9Y2I6 1382 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 CDC42BPGQ6DT37 1551 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 ACEP12821 1306 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 PRR36Q9H6K5 1346 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 TMC1Q8TDI8 760 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 IFT172Q9UG01 1749 aa6.32□□□□□ -1.4
SHANK2-216ENST00000482659 CHD2O14647 1828 aaKnown RBP6.32□□□□□ -1.4
SHANK2-216ENST00000482659 SBNO1A3KN83 1393 aa6.31□□□□□ -1.4
SHANK2-216ENST00000482659 SPATA31A3Q5VYP0 1347 aa6.31□□□□□ -1.4
SHANK2-216ENST00000482659 KIAA1210Q9ULL0 1709 aa6.31□□□□□ -1.4
SHANK2-216ENST00000482659 PAK3O75914 559 aaPredicted RBP6.31□□□□□ -1.4
SHANK2-216ENST00000482659 HSPA5P11021 654 aaKnown RBP6.31□□□□□ -1.4
SHANK2-216ENST00000482659 HAP1P54257 671 aaPredicted RBP6.31□□□□□ -1.4
SHANK2-216ENST00000482659 LMOD2Q6P5Q4 547 aa6.31□□□□□ -1.4
SHANK2-216ENST00000482659 DDX17Q92841 729 aaKnown RBP6.31□□□□□ -1.4
SHANK2-216ENST00000482659 ARHGEF10O15013 1369 aa6.31□□□□□ -1.4
SHANK2-216ENST00000482659 TULP4Q9NRJ4 1543 aa6.3□□□□□ -1.4
SHANK2-216ENST00000482659 MYO5BQ9ULV0 1848 aa6.3□□□□□ -1.4
SHANK2-216ENST00000482659 XPCQ01831 940 aaPredicted RBP6.3□□□□□ -1.4
SHANK2-216ENST00000482659 NLRP13Q86W25 1043 aa6.3□□□□□ -1.4
SHANK2-216ENST00000482659 PPIP5K1Q6PFW1 1433 aa6.3□□□□□ -1.4
SHANK2-216ENST00000482659 POLR3AO14802 1390 aaPredicted RBP6.3□□□□□ -1.4
SHANK2-216ENST00000482659 TTC21AQ8NDW8 1320 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms