RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
HDGF-208ENST00000482651 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
HDGF-208ENST00000482651 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
HDGF-208ENST00000482651 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
HDGF-208ENST00000482651 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
HDGF-208ENST00000482651 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
HDGF-208ENST00000482651 ATF3P18847 181 aa12.9□□□□□ -0.34
HDGF-208ENST00000482651 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
HDGF-208ENST00000482651 DCCP43146 1447 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 NBR1Q14596 966 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 RGL3Q3MIN7 710 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 ILDR2Q71H61 639 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
HDGF-208ENST00000482651 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
HDGF-208ENST00000482651 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
HDGF-208ENST00000482651 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
HDGF-208ENST00000482651 ADGRL3Q9HAR2 1447 aa12.87□□□□□ -0.35
HDGF-208ENST00000482651 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
HDGF-208ENST00000482651 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
HDGF-208ENST00000482651 PPLO60437 1756 aa12.85□□□□□ -0.35
HDGF-208ENST00000482651 RGL2O15211 777 aa12.85□□□□□ -0.35
HDGF-208ENST00000482651 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
HDGF-208ENST00000482651 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
HDGF-208ENST00000482651 MST1RQ04912 1400 aa12.83□□□□□ -0.36
HDGF-208ENST00000482651 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
HDGF-208ENST00000482651 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
HDGF-208ENST00000482651 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
HDGF-208ENST00000482651 JCADQ9P266 1359 aa12.82□□□□□ -0.36
HDGF-208ENST00000482651 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
HDGF-208ENST00000482651 MYOM2P54296 1465 aa12.81□□□□□ -0.36
HDGF-208ENST00000482651 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
HDGF-208ENST00000482651 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
HDGF-208ENST00000482651 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
HDGF-208ENST00000482651 TECPR2O15040 1411 aa12.8□□□□□ -0.36
HDGF-208ENST00000482651 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
HDGF-208ENST00000482651 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
HDGF-208ENST00000482651 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
HDGF-208ENST00000482651 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
HDGF-208ENST00000482651 ASXL1Q8IXJ9 1541 aa12.79□□□□□ -0.36
HDGF-208ENST00000482651 SOCS7O14512 581 aa12.79□□□□□ -0.36
HDGF-208ENST00000482651 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
HDGF-208ENST00000482651 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
HDGF-208ENST00000482651 TMEM132EQ6IEE7 984 aa12.78□□□□□ -0.36
HDGF-208ENST00000482651 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
HDGF-208ENST00000482651 STK26Q9P289 416 aa12.78□□□□□ -0.36
HDGF-208ENST00000482651 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
HDGF-208ENST00000482651 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
HDGF-208ENST00000482651 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
HDGF-208ENST00000482651 SPATA31A6Q5VVP1 1343 aa12.76□□□□□ -0.37
HDGF-208ENST00000482651 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
HDGF-208ENST00000482651 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
HDGF-208ENST00000482651 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
HDGF-208ENST00000482651 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
HDGF-208ENST00000482651 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
HDGF-208ENST00000482651 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
HDGF-208ENST00000482651 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
HDGF-208ENST00000482651 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
HDGF-208ENST00000482651 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
HDGF-208ENST00000482651 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
HDGF-208ENST00000482651 LRRC59Q96AG4 307 aaKnown RBP12.73□□□□□ -0.37
HDGF-208ENST00000482651 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
HDGF-208ENST00000482651 LAMC1P11047 1609 aa12.73□□□□□ -0.37
HDGF-208ENST00000482651 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
HDGF-208ENST00000482651 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
HDGF-208ENST00000482651 LRP6O75581 1613 aa12.72□□□□□ -0.37
HDGF-208ENST00000482651 NHSL1Q5SYE7 1610 aa12.72□□□□□ -0.37
HDGF-208ENST00000482651 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
HDGF-208ENST00000482651 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
HDGF-208ENST00000482651 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 ESCO1Q5FWF5 840 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
HDGF-208ENST00000482651 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
HDGF-208ENST00000482651 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
HDGF-208ENST00000482651 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
HDGF-208ENST00000482651 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
HDGF-208ENST00000482651 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
HDGF-208ENST00000482651 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
HDGF-208ENST00000482651 POGKQ9P215 609 aa12.66□□□□□ -0.38
HDGF-208ENST00000482651 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
HDGF-208ENST00000482651 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDGF-208ENST00000482651 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
HDGF-208ENST00000482651 FOXO3O43524 673 aa12.64□□□□□ -0.39
HDGF-208ENST00000482651 PXDNQ92626 1479 aa12.64□□□□□ -0.39
HDGF-208ENST00000482651 FMN2Q9NZ56 1722 aa12.63□□□□□ -0.39
HDGF-208ENST00000482651 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
HDGF-208ENST00000482651 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
HDGF-208ENST00000482651 AFF2P51816 1311 aa12.62□□□□□ -0.39
HDGF-208ENST00000482651 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
HDGF-208ENST00000482651 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
HDGF-208ENST00000482651 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
HDGF-208ENST00000482651 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
HDGF-208ENST00000482651 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
HDGF-208ENST00000482651 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
HDGF-208ENST00000482651 KIF1AQ12756 1690 aa12.6□□□□□ -0.39
HDGF-208ENST00000482651 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
HDGF-208ENST00000482651 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms