RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 DLC1Q96QB1 1528 aa29.93■■■□□ 2.38
SEC13-217ENST00000482647 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
SEC13-217ENST00000482647 SAFB2Q14151 953 aaKnown RBP eCLIP29.91■■■□□ 2.38
SEC13-217ENST00000482647 NBPF8Q3BBV2 869 aa29.89■■■□□ 2.38
SEC13-217ENST00000482647 TIMELESSQ9UNS1 1208 aa29.89■■■□□ 2.38
SEC13-217ENST00000482647 NALCNQ8IZF0 1738 aa29.88■■■□□ 2.37
SEC13-217ENST00000482647 MST1RQ04912 1400 aa29.88■■■□□ 2.37
SEC13-217ENST00000482647 ROCK2O75116 1388 aaKnown RBP29.85■■■□□ 2.37
SEC13-217ENST00000482647 BRINP3Q76B58 766 aa29.84■■■□□ 2.37
SEC13-217ENST00000482647 ROBO1Q9Y6N7 1651 aa29.82■■■□□ 2.36
SEC13-217ENST00000482647 CDC42BPGQ6DT37 1551 aa29.81■■■□□ 2.36
SEC13-217ENST00000482647 C1orf167Q5SNV9 1468 aa29.81■■■□□ 2.36
SEC13-217ENST00000482647 MINK1Q8N4C8 1332 aaPredicted RBP29.79■■■□□ 2.36
SEC13-217ENST00000482647 HIRIP3Q9BW71 556 aaPredicted RBP29.78■■■□□ 2.36
SEC13-217ENST00000482647 TRPM1Q7Z4N2 1603 aa29.77■■■□□ 2.36
SEC13-217ENST00000482647 NUTM2FA1L443 756 aa29.76■■■□□ 2.35
SEC13-217ENST00000482647 ORAI2Q96SN7 254 aa29.76■■■□□ 2.35
SEC13-217ENST00000482647 ESCO1Q5FWF5 840 aa29.75■■■□□ 2.35
SEC13-217ENST00000482647 CARD11Q9BXL7 1154 aa29.75■■■□□ 2.35
SEC13-217ENST00000482647 GPRASP1Q5JY77 1395 aa29.75■■■□□ 2.35
SEC13-217ENST00000482647 CENPJQ9HC77 1338 aaPredicted RBP29.74■■■□□ 2.35
SEC13-217ENST00000482647 WASLO00401 505 aaPredicted RBP29.72■■■□□ 2.35
SEC13-217ENST00000482647 ARHGEF28Q8N1W1 1705 aaKnown RBP29.71■■■□□ 2.35
SEC13-217ENST00000482647 RALGAPBQ86X10 1494 aa29.71■■■□□ 2.35
SEC13-217ENST00000482647 EIF3AQ14152 1382 aaKnown RBP29.69■■■□□ 2.34
SEC13-217ENST00000482647 ADGRB2O60241 1585 aa29.68■■■□□ 2.34
SEC13-217ENST00000482647 AHDC1Q5TGY3 1603 aaPredicted RBP29.65■■■□□ 2.34
SEC13-217ENST00000482647 DDX17Q92841 729 aaKnown RBP29.65■■■□□ 2.34
SEC13-217ENST00000482647 CDK19Q9BWU1 502 aa29.65■■■□□ 2.34
SEC13-217ENST00000482647 FMN2Q9NZ56 1722 aa29.65■■■□□ 2.34
SEC13-217ENST00000482647 ANKARQ7Z5J8 1434 aa29.64■■■□□ 2.34
SEC13-217ENST00000482647 PHLPP1O60346 1717 aa29.62■■■□□ 2.33
SEC13-217ENST00000482647 FOXO3O43524 673 aa29.62■■■□□ 2.33
SEC13-217ENST00000482647 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
SEC13-217ENST00000482647 NPHP3Q7Z494 1330 aa29.62■■■□□ 2.33
SEC13-217ENST00000482647 LRRC59Q96AG4 307 aaKnown RBP29.61■■■□□ 2.33
SEC13-217ENST00000482647 JCADQ9P266 1359 aa29.6■■■□□ 2.33
SEC13-217ENST00000482647 NUDT16Q96DE0 195 aaKnown RBP29.59■■■□□ 2.33
SEC13-217ENST00000482647 SOS2Q07890 1332 aaPredicted RBP29.58■■■□□ 2.33
SEC13-217ENST00000482647 COL16A1Q07092 1604 aaPredicted RBP29.57■■■□□ 2.32
SEC13-217ENST00000482647 TULP4Q9NRJ4 1543 aa29.57■■■□□ 2.32
SEC13-217ENST00000482647 PRR36Q9H6K5 1346 aa29.57■■■□□ 2.32
SEC13-217ENST00000482647 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
SEC13-217ENST00000482647 SRPK2P78362 688 aaKnown RBP29.56■■■□□ 2.32
SEC13-217ENST00000482647 NHSL1Q5SYE7 1610 aa29.55■■■□□ 2.32
SEC13-217ENST00000482647 PMFBP1Q8TBY8 1022 aa29.54■■■□□ 2.32
SEC13-217ENST00000482647 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
SEC13-217ENST00000482647 XPCQ01831 940 aaPredicted RBP29.52■■■□□ 2.32
SEC13-217ENST00000482647 PSME1Q06323 249 aa29.52■■■□□ 2.32
SEC13-217ENST00000482647 CABP2Q9NPB3 220 aa29.52■■■□□ 2.32
SEC13-217ENST00000482647 QRICH2Q9H0J4 1663 aa29.51■■■□□ 2.31
SEC13-217ENST00000482647 USP32Q8NFA0 1604 aa29.5■■■□□ 2.31
SEC13-217ENST00000482647 KRT28Q7Z3Y7 464 aa29.5■■■□□ 2.31
SEC13-217ENST00000482647 SBNO2Q9Y2G9 1366 aa29.5■■■□□ 2.31
SEC13-217ENST00000482647 KIF1AQ12756 1690 aa29.49■■■□□ 2.31
SEC13-217ENST00000482647 ATP7BP35670 1465 aa29.48■■■□□ 2.31
SEC13-217ENST00000482647 ST20-MTHFSA0A0A6YYL1 179 aa29.48■■■□□ 2.31
SEC13-217ENST00000482647 NGDNQ8NEJ9 315 aaKnown RBP29.48■■■□□ 2.31
SEC13-217ENST00000482647 SPATA31A6Q5VVP1 1343 aa29.47■■■□□ 2.31
SEC13-217ENST00000482647 SLC24A1O60721 1099 aa29.47■■■□□ 2.31
SEC13-217ENST00000482647 PXDNQ92626 1479 aa29.47■■■□□ 2.31
SEC13-217ENST00000482647 RGPD8O14715 1765 aaPredicted RBP29.46■■■□□ 2.31
SEC13-217ENST00000482647 USP47Q96K76 1375 aa29.45■■■□□ 2.31
SEC13-217ENST00000482647 PLEKHG3A1L390 1219 aa29.45■■■□□ 2.31
SEC13-217ENST00000482647 PNPLA6Q8IY17 1366 aa29.43■■■□□ 2.3
SEC13-217ENST00000482647 TESK2Q96S53 571 aa29.41■■■□□ 2.3
SEC13-217ENST00000482647 SPATA31A3Q5VYP0 1347 aa29.4■■■□□ 2.3
SEC13-217ENST00000482647 PPIP5K1Q6PFW1 1433 aa29.39■■■□□ 2.3
SEC13-217ENST00000482647 CABP1Q9NZU7 370 aa29.39■■■□□ 2.3
SEC13-217ENST00000482647 ACEP12821 1306 aa29.39■■■□□ 2.3
SEC13-217ENST00000482647 SBNO1A3KN83 1393 aa29.39■■■□□ 2.29
SEC13-217ENST00000482647 DISP3Q9P2K9 1392 aa29.39■■■□□ 2.29
SEC13-217ENST00000482647 SHPRHQ149N8 1683 aa29.38■■■□□ 2.29
SEC13-217ENST00000482647 NUTM2BA6NNL0 878 aaPredicted RBP29.38■■■□□ 2.29
SEC13-217ENST00000482647 NUTM2EB1AL46 878 aaPredicted RBP29.38■■■□□ 2.29
SEC13-217ENST00000482647 NUTM2AQ8IVF1 878 aaPredicted RBP29.38■■■□□ 2.29
SEC13-217ENST00000482647 MED1Q15648 1581 aaPredicted RBP29.38■■■□□ 2.29
SEC13-217ENST00000482647 POLR3AO14802 1390 aaPredicted RBP29.37■■■□□ 2.29
SEC13-217ENST00000482647 ATAD2Q6PL18 1390 aa29.37■■■□□ 2.29
SEC13-217ENST00000482647 PHF23Q9BUL5 403 aaPredicted RBP29.36■■■□□ 2.29
SEC13-217ENST00000482647 ITSN1Q15811 1721 aa29.35■■■□□ 2.29
SEC13-217ENST00000482647 PUS7Q96PZ0 661 aaKnown RBP29.35■■■□□ 2.29
SEC13-217ENST00000482647 MEX3CQ5U5Q3 659 aaKnown RBP29.34■■■□□ 2.29
SEC13-217ENST00000482647 LMOD2Q6P5Q4 547 aa29.34■■■□□ 2.29
SEC13-217ENST00000482647 PAK3O75914 559 aaPredicted RBP29.33■■■□□ 2.29
SEC13-217ENST00000482647 TMF1P82094 1093 aa29.33■■■□□ 2.29
SEC13-217ENST00000482647 TNS3Q68CZ2 1445 aa29.33■■■□□ 2.29
SEC13-217ENST00000482647 ARHGEF10O15013 1369 aa29.31■■■□□ 2.28
SEC13-217ENST00000482647 EIF4G2P78344 907 aaKnown RBP eCLIP29.31■■■□□ 2.28
SEC13-217ENST00000482647 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
SEC13-217ENST00000482647 LRP6O75581 1613 aa29.29■■■□□ 2.28
SEC13-217ENST00000482647 CDCA8Q53HL2 280 aa29.27■■■□□ 2.28
SEC13-217ENST00000482647 TMC1Q8TDI8 760 aa29.27■■■□□ 2.28
SEC13-217ENST00000482647 ZNF692Q9BU19 519 aaPredicted RBP29.27■■■□□ 2.28
SEC13-217ENST00000482647 ADAMTS2O95450 1211 aa29.26■■■□□ 2.27
SEC13-217ENST00000482647 COL22A1Q8NFW1 1626 aaPredicted RBP29.24■■■□□ 2.27
SEC13-217ENST00000482647 BRD4O60885 1362 aaPredicted RBP29.24■■■□□ 2.27
SEC13-217ENST00000482647 HSPA5P11021 654 aaKnown RBP29.23■■■□□ 2.27
SEC13-217ENST00000482647 HAP1P54257 671 aaPredicted RBP29.22■■■□□ 2.27
SEC13-217ENST00000482647 PLEKHG5O94827 1062 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms