RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
TMEM39A-207ENST00000482162 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
TMEM39A-207ENST00000482162 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
TMEM39A-207ENST00000482162 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
TMEM39A-207ENST00000482162 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
TMEM39A-207ENST00000482162 STK26Q9P289 416 aa14.34□□□□□ -0.11
TMEM39A-207ENST00000482162 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.12
TMEM39A-207ENST00000482162 PNPLA6Q8IY17 1366 aa14.33□□□□□ -0.12
TMEM39A-207ENST00000482162 PLEKHH1Q9ULM0 1364 aa14.33□□□□□ -0.12
TMEM39A-207ENST00000482162 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
TMEM39A-207ENST00000482162 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
TMEM39A-207ENST00000482162 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
TMEM39A-207ENST00000482162 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
TMEM39A-207ENST00000482162 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
TMEM39A-207ENST00000482162 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
TMEM39A-207ENST00000482162 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
TMEM39A-207ENST00000482162 PXDNQ92626 1479 aa14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 FOXO3O43524 673 aa14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
TMEM39A-207ENST00000482162 PRAM1Q96QH2 718 aa14.25□□□□□ -0.13
TMEM39A-207ENST00000482162 AFF2P51816 1311 aa14.23□□□□□ -0.13
TMEM39A-207ENST00000482162 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
TMEM39A-207ENST00000482162 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
TMEM39A-207ENST00000482162 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
TMEM39A-207ENST00000482162 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
TMEM39A-207ENST00000482162 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
TMEM39A-207ENST00000482162 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
TMEM39A-207ENST00000482162 RXRBP28702 533 aa14.21□□□□□ -0.13
TMEM39A-207ENST00000482162 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
TMEM39A-207ENST00000482162 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
TMEM39A-207ENST00000482162 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
TMEM39A-207ENST00000482162 TRAK1Q9UPV9 953 aa14.2□□□□□ -0.14
TMEM39A-207ENST00000482162 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
TMEM39A-207ENST00000482162 ADAMTS2O95450 1211 aa14.19□□□□□ -0.14
TMEM39A-207ENST00000482162 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
TMEM39A-207ENST00000482162 POGKQ9P215 609 aa14.19□□□□□ -0.14
TMEM39A-207ENST00000482162 ADGRB2O60241 1585 aa14.18□□□□□ -0.14
TMEM39A-207ENST00000482162 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
TMEM39A-207ENST00000482162 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
TMEM39A-207ENST00000482162 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
TMEM39A-207ENST00000482162 RBM6P78332 1123 aaKnown RBP14.17□□□□□ -0.14
TMEM39A-207ENST00000482162 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM39A-207ENST00000482162 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
TMEM39A-207ENST00000482162 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
TMEM39A-207ENST00000482162 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
TMEM39A-207ENST00000482162 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.14
TMEM39A-207ENST00000482162 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
TMEM39A-207ENST00000482162 BCL9LQ86UU0 1499 aa14.14□□□□□ -0.15
TMEM39A-207ENST00000482162 PSME1Q06323 249 aa14.14□□□□□ -0.15
TMEM39A-207ENST00000482162 USP21Q9UK80 565 aa14.14□□□□□ -0.15
TMEM39A-207ENST00000482162 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
TMEM39A-207ENST00000482162 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
TMEM39A-207ENST00000482162 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
TMEM39A-207ENST00000482162 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
TMEM39A-207ENST00000482162 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM39A-207ENST00000482162 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
TMEM39A-207ENST00000482162 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
TMEM39A-207ENST00000482162 ATRNO75882 1429 aa14.12□□□□□ -0.15
TMEM39A-207ENST00000482162 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
TMEM39A-207ENST00000482162 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
TMEM39A-207ENST00000482162 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
TMEM39A-207ENST00000482162 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TMEM39A-207ENST00000482162 RGS12O14924 1447 aa14.1□□□□□ -0.15
TMEM39A-207ENST00000482162 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
TMEM39A-207ENST00000482162 SLIT2O94813 1529 aa14.1□□□□□ -0.15
TMEM39A-207ENST00000482162 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
TMEM39A-207ENST00000482162 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
TMEM39A-207ENST00000482162 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
TMEM39A-207ENST00000482162 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
TMEM39A-207ENST00000482162 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
TMEM39A-207ENST00000482162 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
TMEM39A-207ENST00000482162 UNC5CLQ8IV45 518 aa14.07□□□□□ -0.16
TMEM39A-207ENST00000482162 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
TMEM39A-207ENST00000482162 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
TMEM39A-207ENST00000482162 GPRASP1Q5JY77 1395 aa14.07□□□□□ -0.16
TMEM39A-207ENST00000482162 ATP7BP35670 1465 aa14.06□□□□□ -0.16
TMEM39A-207ENST00000482162 PLEKHG3A1L390 1219 aa14.06□□□□□ -0.16
TMEM39A-207ENST00000482162 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
TMEM39A-207ENST00000482162 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
TMEM39A-207ENST00000482162 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
TMEM39A-207ENST00000482162 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
TMEM39A-207ENST00000482162 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
TMEM39A-207ENST00000482162 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.04□□□□□ -0.16
TMEM39A-207ENST00000482162 VPS72Q15906 364 aa14.03□□□□□ -0.16
TMEM39A-207ENST00000482162 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
TMEM39A-207ENST00000482162 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
TMEM39A-207ENST00000482162 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
TMEM39A-207ENST00000482162 NBPF8Q3BBV2 869 aa14.02□□□□□ -0.17
TMEM39A-207ENST00000482162 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
TMEM39A-207ENST00000482162 RALGAPBQ86X10 1494 aa14□□□□□ -0.17
TMEM39A-207ENST00000482162 ACEP12821 1306 aa14□□□□□ -0.17
TMEM39A-207ENST00000482162 GLI3P10071 1580 aa14□□□□□ -0.17
TMEM39A-207ENST00000482162 ATAD2Q6PL18 1390 aa13.99□□□□□ -0.17
TMEM39A-207ENST00000482162 ABCA3Q99758 1704 aa13.99□□□□□ -0.17
TMEM39A-207ENST00000482162 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
TMEM39A-207ENST00000482162 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms