RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-222ENST00000482096 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
UBE2F-222ENST00000482096 ATF3P18847 181 aa13.16□□□□□ -0.3
UBE2F-222ENST00000482096 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
UBE2F-222ENST00000482096 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
UBE2F-222ENST00000482096 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
UBE2F-222ENST00000482096 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
UBE2F-222ENST00000482096 SPATA31A6Q5VVP1 1343 aa13.14□□□□□ -0.31
UBE2F-222ENST00000482096 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
UBE2F-222ENST00000482096 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
UBE2F-222ENST00000482096 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
UBE2F-222ENST00000482096 ITGAEP38570 1179 aa13.13□□□□□ -0.31
UBE2F-222ENST00000482096 TRPM2O94759 1503 aa13.13□□□□□ -0.31
UBE2F-222ENST00000482096 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
UBE2F-222ENST00000482096 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
UBE2F-222ENST00000482096 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
UBE2F-222ENST00000482096 LRP6O75581 1613 aa13.1□□□□□ -0.31
UBE2F-222ENST00000482096 ZNF772Q68DY9 489 aaPredicted RBP13.1□□□□□ -0.31
UBE2F-222ENST00000482096 DCCP43146 1447 aa13.1□□□□□ -0.31
UBE2F-222ENST00000482096 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
UBE2F-222ENST00000482096 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
UBE2F-222ENST00000482096 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
UBE2F-222ENST00000482096 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
UBE2F-222ENST00000482096 SETBP1Q9Y6X0 1596 aa13.08□□□□□ -0.32
UBE2F-222ENST00000482096 METP08581 1390 aa13.07□□□□□ -0.32
UBE2F-222ENST00000482096 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
UBE2F-222ENST00000482096 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
UBE2F-222ENST00000482096 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
UBE2F-222ENST00000482096 MST1RQ04912 1400 aa13.05□□□□□ -0.32
UBE2F-222ENST00000482096 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
UBE2F-222ENST00000482096 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
UBE2F-222ENST00000482096 GSE1Q14687 1217 aa13.05□□□□□ -0.32
UBE2F-222ENST00000482096 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
UBE2F-222ENST00000482096 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
UBE2F-222ENST00000482096 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-222ENST00000482096 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-222ENST00000482096 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-222ENST00000482096 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-222ENST00000482096 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
UBE2F-222ENST00000482096 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
UBE2F-222ENST00000482096 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
UBE2F-222ENST00000482096 RXRBP28702 533 aa13.03□□□□□ -0.32
UBE2F-222ENST00000482096 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBE2F-222ENST00000482096 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
UBE2F-222ENST00000482096 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
UBE2F-222ENST00000482096 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
UBE2F-222ENST00000482096 AFF2P51816 1311 aa13.01□□□□□ -0.33
UBE2F-222ENST00000482096 NAIPQ13075 1403 aa13.01□□□□□ -0.33
UBE2F-222ENST00000482096 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
UBE2F-222ENST00000482096 CLTCL1P53675 1640 aa13□□□□□ -0.33
UBE2F-222ENST00000482096 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
UBE2F-222ENST00000482096 DDX17Q92841 729 aaKnown RBP13□□□□□ -0.33
UBE2F-222ENST00000482096 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
UBE2F-222ENST00000482096 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
UBE2F-222ENST00000482096 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
UBE2F-222ENST00000482096 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
UBE2F-222ENST00000482096 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
UBE2F-222ENST00000482096 RPGRIP1LQ68CZ1 1315 aa12.97□□□□□ -0.33
UBE2F-222ENST00000482096 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
UBE2F-222ENST00000482096 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
UBE2F-222ENST00000482096 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
UBE2F-222ENST00000482096 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
UBE2F-222ENST00000482096 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.34
UBE2F-222ENST00000482096 SOS2Q07890 1332 aaPredicted RBP12.95□□□□□ -0.34
UBE2F-222ENST00000482096 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
UBE2F-222ENST00000482096 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
UBE2F-222ENST00000482096 NALCNQ8IZF0 1738 aa12.95□□□□□ -0.34
UBE2F-222ENST00000482096 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
UBE2F-222ENST00000482096 KIF1BO60333 1816 aa12.94□□□□□ -0.34
UBE2F-222ENST00000482096 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
UBE2F-222ENST00000482096 PYGBP11216 843 aa12.93□□□□□ -0.34
UBE2F-222ENST00000482096 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
UBE2F-222ENST00000482096 RGL2O15211 777 aa12.92□□□□□ -0.34
UBE2F-222ENST00000482096 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
UBE2F-222ENST00000482096 LAMC1P11047 1609 aa12.91□□□□□ -0.34
UBE2F-222ENST00000482096 RGS12O14924 1447 aa12.91□□□□□ -0.34
UBE2F-222ENST00000482096 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
UBE2F-222ENST00000482096 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
UBE2F-222ENST00000482096 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
UBE2F-222ENST00000482096 POTEHQ6S545 545 aa12.89□□□□□ -0.35
UBE2F-222ENST00000482096 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
UBE2F-222ENST00000482096 USP21Q9UK80 565 aa12.89□□□□□ -0.35
UBE2F-222ENST00000482096 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
UBE2F-222ENST00000482096 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
UBE2F-222ENST00000482096 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
UBE2F-222ENST00000482096 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
UBE2F-222ENST00000482096 HAX1O00165 279 aa12.86□□□□□ -0.35
UBE2F-222ENST00000482096 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-222ENST00000482096 PPLO60437 1756 aa12.86□□□□□ -0.35
UBE2F-222ENST00000482096 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 FOXO3O43524 673 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 RGL3Q3MIN7 710 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 TECPR2O15040 1411 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 CDC42BPGQ6DT37 1551 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 MYOM2P54296 1465 aa12.85□□□□□ -0.35
UBE2F-222ENST00000482096 LRPPRCP42704 1394 aaKnown RBP12.84□□□□□ -0.35
UBE2F-222ENST00000482096 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
UBE2F-222ENST00000482096 STK26Q9P289 416 aa12.84□□□□□ -0.35
UBE2F-222ENST00000482096 ATRNO75882 1429 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms