RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 WASHC2AQ641Q2 1341 aa11.14□□□□□ -0.63
MECP2-208ENST00000481807 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
MECP2-208ENST00000481807 MIER1Q8N108 512 aa11.14□□□□□ -0.63
MECP2-208ENST00000481807 HIRIP3Q9BW71 556 aaPredicted RBP11.14□□□□□ -0.63
MECP2-208ENST00000481807 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
MECP2-208ENST00000481807 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
MECP2-208ENST00000481807 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
MECP2-208ENST00000481807 RPGRIP1LQ68CZ1 1315 aa11.13□□□□□ -0.63
MECP2-208ENST00000481807 RGS12O14924 1447 aa11.13□□□□□ -0.63
MECP2-208ENST00000481807 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
MECP2-208ENST00000481807 ZBTB22O15209 634 aa11.12□□□□□ -0.63
MECP2-208ENST00000481807 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
MECP2-208ENST00000481807 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
MECP2-208ENST00000481807 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
MECP2-208ENST00000481807 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
MECP2-208ENST00000481807 PPLO60437 1756 aa11.1□□□□□ -0.63
MECP2-208ENST00000481807 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
MECP2-208ENST00000481807 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
MECP2-208ENST00000481807 CFAP65Q6ZU64 1925 aaKnown RBP11.09□□□□□ -0.63
MECP2-208ENST00000481807 ATAD2Q6PL18 1390 aa11.09□□□□□ -0.63
MECP2-208ENST00000481807 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
MECP2-208ENST00000481807 AFF2P51816 1311 aa11.09□□□□□ -0.63
MECP2-208ENST00000481807 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
MECP2-208ENST00000481807 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
MECP2-208ENST00000481807 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
MECP2-208ENST00000481807 TMEM131LA2VDJ0 1609 aa11.08□□□□□ -0.64
MECP2-208ENST00000481807 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.64
MECP2-208ENST00000481807 PIK3C2GO75747 1445 aa11.08□□□□□ -0.64
MECP2-208ENST00000481807 IDI1Q13907 227 aa11.07□□□□□ -0.64
MECP2-208ENST00000481807 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
MECP2-208ENST00000481807 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
MECP2-208ENST00000481807 SLC26A8Q96RN1 970 aa11.07□□□□□ -0.64
MECP2-208ENST00000481807 ST20-MTHFSA0A0A6YYL1 179 aa11.06□□□□□ -0.64
MECP2-208ENST00000481807 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
MECP2-208ENST00000481807 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
MECP2-208ENST00000481807 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
MECP2-208ENST00000481807 EIF3AQ14152 1382 aaKnown RBP11.04□□□□□ -0.64
MECP2-208ENST00000481807 NGLY1Q96IV0 654 aa11.04□□□□□ -0.64
MECP2-208ENST00000481807 TESK2Q96S53 571 aa11.04□□□□□ -0.64
MECP2-208ENST00000481807 C19orf44Q9H6X5 657 aa11.04□□□□□ -0.64
MECP2-208ENST00000481807 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
MECP2-208ENST00000481807 LRP5O75197 1615 aa11.04□□□□□ -0.64
MECP2-208ENST00000481807 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
MECP2-208ENST00000481807 ANP32CO43423 234 aa11.03□□□□□ -0.64
MECP2-208ENST00000481807 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
MECP2-208ENST00000481807 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
MECP2-208ENST00000481807 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.03□□□□□ -0.64
MECP2-208ENST00000481807 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
MECP2-208ENST00000481807 PLEKHG1Q9ULL1 1385 aa11.03□□□□□ -0.64
MECP2-208ENST00000481807 DCCP43146 1447 aa11.02□□□□□ -0.64
MECP2-208ENST00000481807 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
MECP2-208ENST00000481807 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
MECP2-208ENST00000481807 CHGAP10645 457 aaKnown RBP11.02□□□□□ -0.65
MECP2-208ENST00000481807 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
MECP2-208ENST00000481807 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
MECP2-208ENST00000481807 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
MECP2-208ENST00000481807 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
MECP2-208ENST00000481807 PIK3R4Q99570 1358 aa11.02□□□□□ -0.65
MECP2-208ENST00000481807 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
MECP2-208ENST00000481807 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
MECP2-208ENST00000481807 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
MECP2-208ENST00000481807 MYO5BQ9ULV0 1848 aa11□□□□□ -0.65
MECP2-208ENST00000481807 NHSL1Q5SYE7 1610 aa11□□□□□ -0.65
MECP2-208ENST00000481807 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
MECP2-208ENST00000481807 ATF3P18847 181 aa10.99□□□□□ -0.65
MECP2-208ENST00000481807 TMF1P82094 1093 aa10.99□□□□□ -0.65
MECP2-208ENST00000481807 POLA2Q14181 598 aa10.99□□□□□ -0.65
MECP2-208ENST00000481807 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
MECP2-208ENST00000481807 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
MECP2-208ENST00000481807 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
MECP2-208ENST00000481807 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
MECP2-208ENST00000481807 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.65
MECP2-208ENST00000481807 FNBP4Q8N3X1 1017 aaPredicted RBP10.96□□□□□ -0.65
MECP2-208ENST00000481807 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
MECP2-208ENST00000481807 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
MECP2-208ENST00000481807 ATRNO75882 1429 aa10.95□□□□□ -0.66
MECP2-208ENST00000481807 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
MECP2-208ENST00000481807 RIMS2Q9UQ26 1411 aa10.95□□□□□ -0.66
MECP2-208ENST00000481807 CENPBP07199 599 aaPredicted RBP10.95□□□□□ -0.66
MECP2-208ENST00000481807 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
MECP2-208ENST00000481807 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
MECP2-208ENST00000481807 MST1RQ04912 1400 aa10.94□□□□□ -0.66
MECP2-208ENST00000481807 PTCH1Q13635 1447 aa10.93□□□□□ -0.66
MECP2-208ENST00000481807 CENPJQ9HC77 1338 aaPredicted RBP10.93□□□□□ -0.66
MECP2-208ENST00000481807 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
MECP2-208ENST00000481807 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
MECP2-208ENST00000481807 ARHGEF28Q8N1W1 1705 aaKnown RBP10.92□□□□□ -0.66
MECP2-208ENST00000481807 PUS7Q96PZ0 661 aaKnown RBP10.92□□□□□ -0.66
MECP2-208ENST00000481807 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
MECP2-208ENST00000481807 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
MECP2-208ENST00000481807 BCANQ96GW7 911 aa10.91□□□□□ -0.66
MECP2-208ENST00000481807 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
MECP2-208ENST00000481807 USP21Q9UK80 565 aa10.91□□□□□ -0.66
MECP2-208ENST00000481807 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
MECP2-208ENST00000481807 YTHDC2Q9H6S0 1430 aaKnown RBP10.91□□□□□ -0.66
MECP2-208ENST00000481807 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
MECP2-208ENST00000481807 NRXN3Q9Y4C0 1643 aa10.9□□□□□ -0.66
MECP2-208ENST00000481807 MYOM1P52179 1685 aa10.89□□□□□ -0.67
MECP2-208ENST00000481807 BCL9LQ86UU0 1499 aa10.89□□□□□ -0.67
MECP2-208ENST00000481807 TMEM132EQ6IEE7 984 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms