RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
PKP4-211ENST00000481115 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
PKP4-211ENST00000481115 TPM2P07951 284 aa9.34□□□□□ -0.91
PKP4-211ENST00000481115 AAMPQ13685 434 aa9.34□□□□□ -0.91
PKP4-211ENST00000481115 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
PKP4-211ENST00000481115 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
PKP4-211ENST00000481115 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
PKP4-211ENST00000481115 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
PKP4-211ENST00000481115 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
PKP4-211ENST00000481115 FECHP22830 423 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 TERF1P54274 439 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
PKP4-211ENST00000481115 KANK4Q5T7N3 995 aaPredicted RBP9.33□□□□□ -0.92
PKP4-211ENST00000481115 B4GALNT3Q6L9W6 998 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 BACH2Q9BYV9 841 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 ISY1Q9ULR0 285 aaKnown RBP9.33□□□□□ -0.92
PKP4-211ENST00000481115 RAB3GAP2Q9H2M9 1393 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 CDC42BPAQ5VT25 1732 aa9.33□□□□□ -0.92
PKP4-211ENST00000481115 TSPOAP1O95153 1857 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 ARAP3Q8WWN8 1544 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
PKP4-211ENST00000481115 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
PKP4-211ENST00000481115 PREX2Q70Z35 1606 aa9.31□□□□□ -0.92
PKP4-211ENST00000481115 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
PKP4-211ENST00000481115 HAX1O00165 279 aa9.31□□□□□ -0.92
PKP4-211ENST00000481115 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
PKP4-211ENST00000481115 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
PKP4-211ENST00000481115 ITSN2Q9NZM3 1697 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 SPDYE5A6NIY4 337 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 E9PSI1 815 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 OSBPP22059 807 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 DSG2Q14126 1118 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 MTERF4Q7Z6M4 381 aaKnown RBP9.3□□□□□ -0.92
PKP4-211ENST00000481115 FRAT1Q92837 279 aaPredicted RBP9.3□□□□□ -0.92
PKP4-211ENST00000481115 PNNQ9H307 717 aaKnown RBP9.3□□□□□ -0.92
PKP4-211ENST00000481115 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 PLCH2O75038 1416 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
PKP4-211ENST00000481115 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
PKP4-211ENST00000481115 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
PKP4-211ENST00000481115 GPATCH8Q9UKJ3 1502 aaKnown RBP9.29□□□□□ -0.92
PKP4-211ENST00000481115 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
PKP4-211ENST00000481115 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
PKP4-211ENST00000481115 REPIN1Q9BWE0 567 aaKnown RBP9.28□□□□□ -0.92
PKP4-211ENST00000481115 CFAP74Q9C0B2 1584 aa9.28□□□□□ -0.92
PKP4-211ENST00000481115 TEX14Q8IWB6 1497 aa9.28□□□□□ -0.92
PKP4-211ENST00000481115 RBM10P98175 930 aaKnown RBP9.27□□□□□ -0.93
PKP4-211ENST00000481115 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
PKP4-211ENST00000481115 NEO1Q92859 1461 aa9.27□□□□□ -0.93
PKP4-211ENST00000481115 VIRMAQ69YN4 1812 aaKnown RBP9.26□□□□□ -0.93
PKP4-211ENST00000481115 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
PKP4-211ENST00000481115 FANCAO15360 1455 aa9.26□□□□□ -0.93
PKP4-211ENST00000481115 PHLDB1Q86UU1 1377 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 MYOM3Q5VTT5 1437 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 FOXK1P85037 733 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
PKP4-211ENST00000481115 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 ARHGAP5Q13017 1502 aa9.25□□□□□ -0.93
PKP4-211ENST00000481115 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
PKP4-211ENST00000481115 MIA2Q96PC5 1412 aa9.24□□□□□ -0.93
PKP4-211ENST00000481115 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
PKP4-211ENST00000481115 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
PKP4-211ENST00000481115 INSRP06213 1382 aa9.24□□□□□ -0.93
PKP4-211ENST00000481115 ABCC1P33527 1531 aa9.23□□□□□ -0.93
PKP4-211ENST00000481115 IRX6P78412 446 aaPredicted RBP9.23□□□□□ -0.93
PKP4-211ENST00000481115 MAP3K9P80192 1104 aa9.23□□□□□ -0.93
PKP4-211ENST00000481115 SMAP1Q8IYB5 467 aaPredicted RBP9.23□□□□□ -0.93
PKP4-211ENST00000481115 PRDM4Q9UKN5 801 aa9.23□□□□□ -0.93
PKP4-211ENST00000481115 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 PTGER2P43116 358 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 KCNA1Q09470 495 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 PTGDRQ13258 359 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
PKP4-211ENST00000481115 EFCAB2Q5VUJ9 269 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 LAS1LQ9Y4W2 734 aaKnown RBP9.22□□□□□ -0.93
PKP4-211ENST00000481115 KTN1Q86UP2 1357 aaKnown RBP9.22□□□□□ -0.93
PKP4-211ENST00000481115 TONSLQ96HA7 1378 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 RICTORQ6R327 1708 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
PKP4-211ENST00000481115 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.93
PKP4-211ENST00000481115 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
PKP4-211ENST00000481115 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
PKP4-211ENST00000481115 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
PKP4-211ENST00000481115 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.21□□□□□ -0.94
PKP4-211ENST00000481115 PRKRIP1Q9H875 184 aaPredicted RBP9.21□□□□□ -0.94
PKP4-211ENST00000481115 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
PKP4-211ENST00000481115 KIAA1107Q9UPP5 1409 aa9.21□□□□□ -0.94
PKP4-211ENST00000481115 ADGRL1O94910 1474 aa9.21□□□□□ -0.94
PKP4-211ENST00000481115 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.94
PKP4-211ENST00000481115 PLEKHH2Q8IVE3 1493 aa9.21□□□□□ -0.94
PKP4-211ENST00000481115 COL17A1Q9UMD9 1497 aaPredicted RBP9.21□□□□□ -0.94
PKP4-211ENST00000481115 FRMPD1Q5SYB0 1578 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 BRD1O95696 1058 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms